LOCUS BC000062 2406 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 1 (neutral amino acid
transporter), member 5, mRNA (cDNA clone MGC:1387 IMAGE:3506037),
complete cds.
ACCESSION BC000062
VERSION BC000062.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2406)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2406)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000062.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5032092.
FEATURES Location/Qualifiers
source 1..2406
/db_xref="H-InvDB:HIT000029318"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1387 IMAGE:3506037"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2406
/gene="SLC1A5"
/gene_synonym="AAAT"
/gene_synonym="ASCT2"
/gene_synonym="ATBO"
/gene_synonym="M7VS1"
/gene_synonym="R16"
/db_xref="GeneID:6510"
/db_xref="HGNC:HGNC:10943"
/db_xref="MIM:109190"
CDS 141..1766
/gene="SLC1A5"
/gene_synonym="AAAT"
/gene_synonym="ASCT2"
/gene_synonym="ATBO"
/gene_synonym="M7VS1"
/gene_synonym="R16"
/codon_start=1
/product="solute carrier family 1 (neutral amino acid
transporter), member 5"
/protein_id="AAH00062.1"
/db_xref="GeneID:6510"
/db_xref="HGNC:HGNC:10943"
/db_xref="MIM:109190"
/translation="MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQ
VRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRM
IILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASA
AINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRV
KVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWY
APVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPY
RFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAAL
FQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPV
DHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPELIQVKSELPLD
PLPLPTEEGNPLLKHYRGPAGDATVASEKESVM"
BASE COUNT 438 a 717 c 729 g 522 t
ORIGIN
1 cacaactcta aggagccctc caaagttcca gtctccaggt gctgttactc aactcagtcc
61 taggaacgtc gggtcctggg aaggagccca agcgctccca gccagcttcc aggcgctaag
121 aaaccccggt gcttcccatc atggtggccg atcctcctcg agactccaag gggctcgcag
181 cggcggagcc caccgccaac gggggcctgg cgctggcctc catcgaggac caaggcgcgg
241 cagcaggcgg ctactgcggt tcccgggacc aggtgcgccg ctgccttcga gccaacctgc
301 ttgtgctgct gacagtggtg gccgtggtgg ccggcgtggc gctgggactg ggggtgtcgg
361 gggccggggg tgcgctggcg ttgggcccgg agcgcttgag cgccttcgtc ttcccgggcg
421 agctgctgct gcgtctgctg cggatgatca tcttgccgct ggtggtgtgc agcttgatcg
481 gcggcgccgc cagcctggac cccggcgcgc tcggccgtct gggcgcctgg gcgctgctct
541 ttttcctggt caccacgctg ctggcgtcgg cgctcggagt gggcttggcg ctggctctgc
601 agccgggcgc cgcctccgcc gccatcaacg cctccgtggg agccgcgggc agtgccgaaa
661 atgcccccag caaggaggtg ctcgattcgt tcctggatct tgcgagaaat atcttccctt
721 ccaacctggt gtcagcagcc tttcgctcat actctaccac ctatgaagag aggaatatca
781 ccggaaccag ggtgaaggtg cccgtggggc aggaggtgga ggggatgaac atcctgggct
841 tggtagtgtt tgccatcgtc tttggtgtgg cgctgcggaa gctggggcct gaaggggagc
901 tgcttatccg cttcttcaac tccttcaatg aggccaccat ggttctggtc tcctggatca
961 tgtggtacgc ccctgtgggc atcatgttcc tggtggctgg caagatcgtg gagatggagg
1021 atgtgggttt actctttgcc cgccttggca agtacattct gtgctgcctg ctgggtcacg
1081 ccatccatgg gctcctggta ctgcccctca tctacttcct cttcacccgc aaaaacccct
1141 accgcttcct gtggggcatc gtgacgccgc tggccactgc ctttgggacc tcttccagtt
1201 ccgccacgct gccgctgatg atgaagtgcg tggaggagaa taatggcgtg gccaagcaca
1261 tcagccgttt catcctgccc atcggcgcca ccgtcaacat ggacggtgcc gcgctcttcc
1321 agtgcgtggc cgcagtgttc attgcacagc tcagccagca gtccttggac ttcgtaaaga
1381 tcatcaccat cctggtcacg gccacagcgt ccagcgtggg ggcagcgggc atccctgctg
1441 gaggtgtcct cactctggcc atcatcctcg aagcagtcaa cctcccggtc gaccatatct
1501 ccttgatcct ggctgtggac tggctagtcg accggtcctg taccgtcctc aatgtagaag
1561 gtgacgctct gggggcagga ctcctccaaa attacgtgga ccgtacggag tcgagaagca
1621 cagagcctga gttgatacaa gtgaagagtg agctgcccct ggatccgctg ccactcccca
1681 ctgaggaagg aaaccccctc ctcaaacact atcgggggcc cgcaggggat gccacggtcg
1741 cctctgagaa ggaatcagtc atgtaaaccc cgggagggac cttccctgcc ctgctggggg
1801 tgctctttgg acactggatt atgaggaatg gataaatgga tgagctaggg ctctgggggt
1861 ctgcctgcac actctgggga gccaggggcc ccagcaccct ccaggacagg agatctggga
1921 tgcctggctg ctggagtaca tgtgttcaca agggttactc ctcaaaaccc ccagttctca
1981 ctcatgtccc caactcaagg ctagaaaaca gcaagatgga gaaataatgt tctgctgcgt
2041 ccccaccgtg acctgcctgg cctcccctgt ctcagggagc aggtcacagg tcaccatggg
2101 gaattctagc ccccactggg gggatgttac aacaccatgc tggttatttt ggcggctgta
2161 gttgtggggg gatgtgtgtg tgcacgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtt
2221 ctgtgacctc ctgtccccat ggtacgtccc accctgtccc cagatcccct attccctcca
2281 caataacaga aacactccca gggactctgg ggagaggctg aggacaaata cctgctgtca
2341 ctccagagga catttttttt agcaataaaa ttgagtgtca actatttaaa aaaaaaaaaa
2401 aaaaaa
//