LOCUS BC000046 1193 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens intercellular adhesion molecule 4 (Landsteiner-Wiener
blood group), mRNA (cDNA clone MGC:2108 IMAGE:3505509), complete
cds.
ACCESSION BC000046
VERSION BC000046.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC000046.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12545400.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000029306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2108 IMAGE:3505509"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1193
/gene="ICAM4"
/gene_synonym="CD242"
/db_xref="GeneID:3386"
/db_xref="HGNC:HGNC:5347"
/db_xref="MIM:111250"
CDS 40..858
/gene="ICAM4"
/gene_synonym="CD242"
/codon_start=1
/product="intercellular adhesion molecule 4
(Landsteiner-Wiener blood group)"
/protein_id="AAH00046.1"
/db_xref="GeneID:3386"
/db_xref="HGNC:HGNC:5347"
/db_xref="MIM:111250"
/translation="MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGT
SVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLL
DVRAWSSLAHCLVTCAGKTRWATSRITAYSVPGGLLGGDPEAWKPGHLFRKPGALHRP
GSGQRDLDLRVCCWTPRLLAARDLPRAPQSRRPGGPQQLGTHYTDARLEPRAHSFGLR
FHRCPCRDPPHCGRCVPMQVPSYEVPGVKGDVLCRLSEKKRNMKQSGEMAIHGG"
BASE COUNT 249 a 354 c 355 g 235 t
ORIGIN
1 gctctctggc gcggggcccc ttagtccggg ctttttgcca tggggtctct gttccctctg
61 tcgctgctgt tttttttggc ggccgcctac ccgggagttg ggagcgcgct gggacgccgg
121 actaagcggg cgcaaagccc caagggtagc cctctcgcgc cctccgggac ctcagtgccc
181 ttctgggtgc gcatgagccc ggagttcgtg gctgtgcagc cggggaagtc agtgcagctc
241 aattgcagca acagctgtcc ccagccgcag aattccagcc tccgcacccc gctgcggcaa
301 ggcaagacgc tcagagggcc gggttgggtg tcttaccagc tgctcgacgt gagggcctgg
361 agctccctcg cgcactgcct cgtgacctgc gcaggaaaaa cacgctgggc cacctccagg
421 atcaccgcct acagtgttcc cggtgggcta cttggtggtg accctgaggc atggaagccg
481 ggtcatctat tccgaaagcc tggagcgctt caccggcctg gatctggcca acgtgacctt
541 gacctacgag tttgctgctg gaccccgcga cttctggcag cccgtgatct gccacgcgcg
601 cctcaatctc gacggcctgg tggtccgcaa cagctcggca cccattacac tgatgctcgc
661 ttggagcccc gcgcccacag ctttggcctc cggttccatc gctgcccttg tagggatcct
721 cctcactgtg ggcgctgcgt acctatgcaa gtgcctagct atgaagtccc aggcgtaaag
781 ggggatgttc tatgccggct gagcgagaaa aagaggaata tgaaacaatc tggggaaatg
841 gccatacatg gtggctgacg cctgtaatcc cagcactttg ggaggccgag gcaggagaat
901 cgcttgagcc caggagttcg agaccagcct ggacaacata gtgagacccc gtctatgcaa
961 aaaatacaca aattagcctg gtgtggtggc ccgcacctgt ggtcccagct acccgggagg
1021 ctgagttggg aggatccttt gagccctgaa agtcgaggtt gcagtgagcc ttgatcgtgc
1081 cactgcactc cagcctgggg gacagagcac gaccctgtct ccaaaaataa aataaaaata
1141 aaaataaata ttggcggggg aaccctctgg aatcaaaaaa aaaaaaaaaa aaa
//