LOCUS BC000028 1358 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 50, member A, mRNA
(cDNA clone MGC:1514 IMAGE:3505365), complete cds.
ACCESSION BC000028
VERSION BC000028.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000028.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: h Column: 7.
FEATURES Location/Qualifiers
source 1..1358
/db_xref="H-InvDB:HIT000029293"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1514 IMAGE:3505365"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1358
/gene="FAM50A"
/gene_synonym="9F"
/gene_synonym="DXS9928E"
/gene_synonym="HXC-26"
/gene_synonym="XAP5"
/db_xref="GeneID:9130"
/db_xref="HGNC:HGNC:18786"
/db_xref="MIM:300453"
CDS 82..1101
/gene="FAM50A"
/gene_synonym="9F"
/gene_synonym="DXS9928E"
/gene_synonym="HXC-26"
/gene_synonym="XAP5"
/codon_start=1
/product="family with sequence similarity 50, member A"
/protein_id="AAH00028.1"
/db_xref="GeneID:9130"
/db_xref="HGNC:HGNC:18786"
/db_xref="MIM:300453"
/translation="MAQYKGAASEAGRAMHLMKKREKQREQMEQMKQRIAEENIMKSN
IDKKFSAHYDAVEAELKSSTVGLVTLNDMKAKQEALVKEREKQLAKKEQSKELQMKLE
KLREKERKKEAKRKISSLSFTLEEEEEGGEEEEEAAMYEEEMEREEITTKKRKLGKNP
DVDTSFLPDRDREEEENRLREELRQEWEAKQEKIKSEEIEITFSYWDGSGHRRTVKMR
KGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKS
GPLFNFDVHDDVRLLSDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWD
KYTIR"
BASE COUNT 373 a 353 c 433 g 199 t
ORIGIN
1 cagccaccgc cgctgccgct gccgctgtcg ctgtcgccgc cgccgccgcc cgccgccgcc
61 gccgccgccg ccgccgctgc catggctcaa tacaagggcg ccgcgagcga ggccggccgc
121 gccatgcacc tgatgaagaa gcgggagaag cagcgcgagc agatggagca gatgaagcag
181 cgcatcgcgg aggagaacat catgaaatcc aacattgaca agaagttctc tgcgcactac
241 gacgcggtgg aggcagagct caagtccagc accgtgggtc tcgtgaccct gaatgacatg
301 aaggccaagc aggaggctct ggtgaaggag cgggagaagc agctggccaa gaaggagcag
361 tccaaggagc tgcagatgaa gctggagaag cttcgagaga aggagcgtaa gaaggaagcc
421 aagcggaaga tctccagcct gtccttcacc ctggaggagg aagaagaggg aggcgaggag
481 gaagaggagg cggccatgta tgaggaggag atggaaaggg aagagatcac cacgaagaag
541 agaaaactgg ggaagaaccc agacgttgac acaagcttct tgcctgatcg agaccgtgag
601 gaggaggaga atcggcttcg ggaagagctg cggcaggagt gggaagccaa gcaggagaag
661 atcaagagtg aggagatcga gatcaccttc agctactggg atggctctgg gcaccggcgg
721 acagtcaaga tgagaaaggg caacaccatg cagcagttcc tgcagaaggc gctcgagatc
781 cttcggaaag acttcagtga gctgaggtcc gcaggggtgg agcagctcat gtacatcaag
841 gaggacttga tcatccctca ccatcacagc ttctacgact tcatcgtcac caaggcacgg
901 gggaagagtg gaccactctt caactttgat gttcatgacg atgtgcggtt gctcagtgac
961 gccactgtgg agaaggatga gtcccatgca ggcaaggtgg tgctgaggag ctggtacgag
1021 aagaacaagc acatctttcc cgccagccgc tgggaaccct acgaccctga aaagaagtgg
1081 gacaagtaca cgatccgctg agcatccagg aggctgcgcg gccccggctc ctcagctccc
1141 tcagtgtgcc ccgtggtgtc accgggactc caggcacccg ctcccctgcg accatgccag
1201 gcacgctggg aggaggacgg cagctgctcg tgtcctgccc ctgccacatc agtgactgct
1261 ttattctttt ccaataaaga agtgcacgtg tcagagctgg agcgcctgca ttgtgagaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//