LOCUS BC000026 1522 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 2
(lysophosphatidic acid acyltransferase, beta), mRNA (cDNA clone
MGC:1195 IMAGE:3507150), complete cds.
ACCESSION BC000026
VERSION BC000026.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1522)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1522)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000026.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68835055.
FEATURES Location/Qualifiers
source 1..1522
/db_xref="H-InvDB:HIT000029291"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1195 IMAGE:3507150"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1522
/gene="AGPAT2"
/gene_synonym="1-AGPAT2"
/gene_synonym="BSCL1"
/gene_synonym="LPAAB"
/gene_synonym="LPAAT-beta"
/db_xref="GeneID:10555"
/db_xref="HGNC:HGNC:325"
/db_xref="MIM:603100"
CDS 46..882
/gene="AGPAT2"
/gene_synonym="1-AGPAT2"
/gene_synonym="BSCL1"
/gene_synonym="LPAAB"
/gene_synonym="LPAAT-beta"
/codon_start=1
/product="1-acylglycerol-3-phosphate O-acyltransferase 2
(lysophosphatidic acid acyltransferase, beta)"
/protein_id="AAH00026.1"
/db_xref="GeneID:10555"
/db_xref="HGNC:HGNC:325"
/db_xref="MIM:603100"
/translation="MELWPCLAAALLLLLLLVQLSRAAEFYAKVALYCALCFTVSAVA
SLVCLLRHGGRTVENMSIIGWFVRSFKYFYGLRFEVRDPRRLQEARPCVIVSNHQSIL
DMMGLMEVLPERCVQIAKRELLFLGPVGLIMYLGGVFFINRQRSSTAMTVMADLGERM
VRENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIFPVVYSSFSSFYNTKKKFF
TSGTVTVQVLEAIPTSGLTAADVPALVDTCHRAMRTTFLHISKTPQENGATAGSGVQP
AQ"
BASE COUNT 279 a 487 c 490 g 266 t
ORIGIN
1 ggagcgggag cgagctggcg gcgccgtcgg gcgccgggcc gggccatgga gctgtggccg
61 tgtctggccg cggcgctgct gttgctgctg ctgctggtgc agctgagccg cgcggccgag
121 ttctacgcca aggtcgccct gtactgcgcg ctgtgcttca cggtgtccgc cgtggcctcg
181 ctcgtctgcc tgctgcgcca cggcggccgg acggtggaga acatgagcat catcggctgg
241 ttcgtgcgaa gcttcaagta cttttacggg ctccgcttcg aggtgcggga cccgcgcagg
301 ctgcaggagg cccgtccctg tgtcatcgtc tccaaccacc agagcatcct ggacatgatg
361 ggcctcatgg aggtccttcc ggagcgctgc gtgcagatcg ccaagcggga gctgctcttc
421 ctggggcccg tgggcctcat catgtacctc gggggcgtct tcttcatcaa ccggcagcgc
481 tctagcactg ccatgacagt gatggccgac ctgggcgagc gcatggtcag ggagaacctc
541 aaagtgtgga tctatcccga gggtactcgc aacgacaatg gggacctgct gccttttaag
601 aagggcgcct tctacctggc agtccaggca caggtgccca tcttccccgt ggtgtactct
661 tccttctcct ccttctacaa caccaagaag aagttcttca cttcaggaac agtcacagtg
721 caggtgctgg aagccatccc caccagcggc ctcactgcgg cggacgtccc tgcgctcgtg
781 gacacctgcc accgggccat gaggaccacc ttcctccaca tctccaagac cccccaggag
841 aacggggcca ctgcggggtc tggcgtgcag ccggcccagt agcccagacc acggcagggc
901 atgacctggg gagggcaggt ggaagccgat ggctggagga tgggcagagg ggactcctcc
961 cggcttccaa ataccactct gtccggctcc cccagctctc actcagcccg ggaagcagga
1021 agccccttct gtcactggtc tcagacacag gcccctggtg tcccctgcag ggggctcagc
1081 tggaccctcc ccgggctcga gggcagggac tcgcgcccac ggcacctctg ggagctggga
1141 tgataaagat gaggcttgcg gctgtggccc gctggtgggc tgagccacaa ggcccccgat
1201 ggcccaggag cagatgggag gaccccgagg ccagacgcac actgtccgag ccctctgctc
1261 agccgcctgg gacccaccag ggtgcagctg ggctccaggg tccagcccac aagctgcatc
1321 agggtctctg ggagaggagg ggcctggagg gccaggagtc ccagactcac gcaccctggg
1381 ccacagggag ccgggaatcg gggcctgctg ctcctgctgg cctggaagac tctgtggggt
1441 cagcactgta ctccgttgct gtttttttat aaacacactc ttggaagtgg caaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aa
//