LOCUS       AY944071                 217 bp    mRNA    linear   HUM 17-MAR-2006
DEFINITION  Homo sapiens endogenous virus HERV-K chromosome 16 LTR-promoted
            mRNA sequence.
ACCESSION   AY944071
VERSION     AY944071.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 217)
  AUTHORS   Kovalskaya,E., Buzdin,A., Gogvadze,E., Vinogradova,T. and
            Sverdlov,E.
  TITLE     Functional human endogenous retroviral LTR transcription start
            sites are located between the R and U5 regions
  JOURNAL   Virology 346 (2), 373-378 (2006)
   PUBMED   16337666
REFERENCE   2  (bases 1 to 217)
  AUTHORS   Buzdin,A.A. and Kovalskaya,E.A.
  TITLE     Mapping of HERV-K(HML-2)endogenous retroviral functional promoter
            and transcriptional start site
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 217)
  AUTHORS   Buzdin,A.A. and Kovalskaya,E.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2005) Russian Academy of Sciences,
            Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry,
            Miklukho-Maklaya 16/10, Moscow 117997, Russia
FEATURES             Location/Qualifiers
     source          1..217
                     /db_xref="H-InvDB:HIT000333157"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16p13.3"
                     /tissue_type="testicular parenchyma"
                     /note="endogenous_virus: HERV-K"
     misc_feature    1..>217
                     /note="contains LTR and non-repetitive genomic flanking
                     DNA; obtained using 'cap-switch' effect"
BASE COUNT           52 a           68 c           35 g           62 t
ORIGIN      
        1 agaggctggc ggaatcctcc atatgctgaa cgctggttcc ccgggtcccc ttatttcttt
       61 ctctatactt tgtctctgtg tctttttctt ttccaaatct ctcgtcccac cttacgagaa
      121 acacccacag gtgtgtaggg gcaacccacc cccacatcaa tcatcaatta aaacactccc
      181 ttccttccta acaataggag cgaacatgaa cattgca
//