LOCUS AY944071 217 bp mRNA linear HUM 17-MAR-2006 DEFINITION Homo sapiens endogenous virus HERV-K chromosome 16 LTR-promoted mRNA sequence. ACCESSION AY944071 VERSION AY944071.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 217) AUTHORS Kovalskaya,E., Buzdin,A., Gogvadze,E., Vinogradova,T. and Sverdlov,E. TITLE Functional human endogenous retroviral LTR transcription start sites are located between the R and U5 regions JOURNAL Virology 346 (2), 373-378 (2006) PUBMED 16337666 REFERENCE 2 (bases 1 to 217) AUTHORS Buzdin,A.A. and Kovalskaya,E.A. TITLE Mapping of HERV-K(HML-2)endogenous retroviral functional promoter and transcriptional start site JOURNAL Unpublished REFERENCE 3 (bases 1 to 217) AUTHORS Buzdin,A.A. and Kovalskaya,E.A. TITLE Direct Submission JOURNAL Submitted (21-FEB-2005) Russian Academy of Sciences, Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Miklukho-Maklaya 16/10, Moscow 117997, Russia FEATURES Location/Qualifiers source 1..217 /db_xref="H-InvDB:HIT000333157" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="16" /map="16p13.3" /tissue_type="testicular parenchyma" /note="endogenous_virus: HERV-K" misc_feature 1..>217 /note="contains LTR and non-repetitive genomic flanking DNA; obtained using 'cap-switch' effect" BASE COUNT 52 a 68 c 35 g 62 t ORIGIN 1 agaggctggc ggaatcctcc atatgctgaa cgctggttcc ccgggtcccc ttatttcttt 61 ctctatactt tgtctctgtg tctttttctt ttccaaatct ctcgtcccac cttacgagaa 121 acacccacag gtgtgtaggg gcaacccacc cccacatcaa tcatcaatta aaacactccc 181 ttccttccta acaataggag cgaacatgaa cattgca //