LOCUS AY927579 1308 bp mRNA linear HTC 22-JUL-2005
DEFINITION Homo sapiens mRNA sequence.
ACCESSION AY927579
VERSION AY927579.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1308)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Helt,G., Sementchenko,V.,
Piccolboni,A., Bekiranov,S., Bailey,D.K., Ganesh,M., Ghosh,S.,
Bell,I., Gerhard,D.S. and Gingeras,T.R.
TITLE Transcriptional maps of 10 human chromosomes at 5-nucleotide
resolution
JOURNAL Science 308 (5725), 1149-1154 (2005)
PUBMED 15790807
REFERENCE 2 (bases 1 to 1308)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Sementchenko,V., Piccolboni,A.,
Bekiranov,S., Kampa,D., Ganesh,M., Ghosh,S., Bell,I., Schaefer,C.,
Gerhard,D. and Gingeras,T.R.
TITLE Mapped Polyadenylated and Non-polyadenylated Transcribed Regions
Along 10 Human Chromosomes At 5 Nucleotide Resolution
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1308)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Sementchenko,V., Piccolboni,A.,
Bekiranov,S., Kampa,D., Ganesh,M., Ghosh,S., Bell,I., Schaefer,C.,
Gerhard,D. and Gingeras,T.R.
TITLE Direct Submission
JOURNAL Submitted (08-FEB-2005) Affymetrix, 3380 Central Expressway, Santa
Clara, CA 95051, USA
COMMENT Cloned RT-PCR products derived from RACE/array analysis (see
reference 2) of novel transcripts described in reference 1. The
products were amplified from DNaseI-treated cytosolic polyA+ RNA
from HepG2 cell line and cloned into pGEM-Teasy vector.
FEATURES Location/Qualifiers
source 1..1308
/db_xref="H-InvDB:HIT000332741"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_line="HepG2 (ATCC No. HTB-8065)"
/note="988_chr13_271_top_+"
BASE COUNT 343 a 305 c 359 g 301 t
ORIGIN
1 ggagtactgg gtccactgga gagcgaagag ccgcggccgc caggattccc agcagcggcc
61 gcgtgttgag agcctagaag tggccccgaa gccgtgcctt tcccgatagc caagcagaag
121 taggacttga agcaccgagg ctgggatgcc catgctggtg acgccttggg gctcgcagtt
181 atacttggtg accggtctac acggcgattc ggtgctttcc ggagtagcag attcatctat
241 ctttagaccc accttcgtcc ttcggcggtt tagcacggcc tgcgctttcc tgcgagccct
301 gctgtcaccc gaacagcctg atgacttcac gctcaaccac tggagggcac aaccacatca
361 tttttaaaaa atagattcct ccacttaaag gacatggttt tgggggaaag aacatttaaa
421 aaatgtaaaa agatatatat ctatatctat atatctatct cagattgttc tgatataaac
481 tcaggtggga ttcttcaaaa caggaggctg ttccagtctc ttcattttgc agctgagaaa
541 acgaaggcct tggagcttga gaactccagt tgcccaaggc acacaggtgg tgggtaagga
601 agctgatcat gtctccaaag aatccttcca tgacccagga ggatccggtg ggagagcagg
661 gccgtccaca gctcagctag gacacaagaa ggcccggggt ggcaggagcc ccactgtgtg
721 ctgcggagga tggcagagga agtcagcatt gtcccgaaac tgcaggatca tgtgatgtga
781 tgggaaaaaa ttatgagtac aagacacagg aagagcaggt cacggaaaca catggtgccc
841 agaagggctt aattagtagc agctgtgcgg ggtgatgcac agagtgcccc aagggtgtcc
901 tgagtgaggg tggatgtccc ctgccctctg gcttcgtgaa ggcttcgtga agcctgccgg
961 gtcacccttg ttttcatgga tagcttcttt aggacactct ctccaccagt aattgacaaa
1021 gtctgcttct gttgagtgtc tgataaagga ttgagtttac atgattgtta agataggatc
1081 atgaaagaag acagaagacg gatgtgagtg gccctcagaa aaaaagcatc aaaggaaact
1141 gaggagtctg tgttccgagt tataacatca gtcctgtgtt gaaagcatat tgactttcct
1201 gacttcttat gaccacattt gaggaaagga gtaagcactg gaatcaccaa cacagcatgc
1261 ttacggaggg tggtcaccag cttcatcagc ctcccaattc cacggagc
//