LOCUS AY927472 1546 bp mRNA linear HTC 22-JUL-2005
DEFINITION Homo sapiens mRNA sequence.
ACCESSION AY927472
VERSION AY927472.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1546)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Helt,G., Sementchenko,V.,
Piccolboni,A., Bekiranov,S., Bailey,D.K., Ganesh,M., Ghosh,S.,
Bell,I., Gerhard,D.S. and Gingeras,T.R.
TITLE Transcriptional maps of 10 human chromosomes at 5-nucleotide
resolution
JOURNAL Science 308 (5725), 1149-1154 (2005)
PUBMED 15790807
REFERENCE 2 (bases 1 to 1546)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Sementchenko,V., Piccolboni,A.,
Bekiranov,S., Kampa,D., Ganesh,M., Ghosh,S., Bell,I., Schaefer,C.,
Gerhard,D. and Gingeras,T.R.
TITLE Mapped Polyadenylated and Non-polyadenylated Transcribed Regions
Along 10 Human Chromosomes At 5 Nucleotide Resolution
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1546)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Sementchenko,V., Piccolboni,A.,
Bekiranov,S., Kampa,D., Ganesh,M., Ghosh,S., Bell,I., Schaefer,C.,
Gerhard,D. and Gingeras,T.R.
TITLE Direct Submission
JOURNAL Submitted (08-FEB-2005) Affymetrix, 3380 Central Expressway, Santa
Clara, CA 95051, USA
COMMENT Cloned RT-PCR products derived from RACE/array analysis (see
reference 2) of novel transcripts described in reference 1. The
products were amplified from DNaseI-treated cytosolic polyA+ RNA
from HepG2 cell line and cloned into pGEM-Teasy vector.
FEATURES Location/Qualifiers
source 1..1546
/db_xref="H-InvDB:HIT000332634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_line="HepG2 (ATCC No. HTB-8065)"
/note="16_chr6_118_top_+"
BASE COUNT 313 a 413 c 406 g 414 t
ORIGIN
1 tctggttttc tctgcttcca agtaatttct cttgtgcttt tagcctctgc ttgggtagtt
61 ctcggagctc catagtcttg ggactgtggc tgccccgggg gacgggacct ccgagaacgt
121 tgtagtggag gaactcagaa atagcagtgt cattgtttaa aagctacttg agctttacag
181 cagagggcca gagatagcag agtgtttccg tacacttttt tttttttttt ttgagatgga
241 gtcttgctct gtcgcccagg ctggggtgca gtggtgcaat ctcagctcaa tgcaagctct
301 gcctcccggg ttcacaccgt tctcctgcct cggcctcccg agtagctggg actacaggtg
361 cccgccacaa agcctggcta attttttttt ttttttgtag tttcagtaga gacagggttt
421 caccgtgtca gccaggatgg tctcgatctc ctgacctcgt gatccgccca cctgtgaatt
481 gaaggtgttg agtttgctcc ctgaggtcat tcctatggct cctgggcctc tgaggatctg
541 tcaggcccca gagctgagtt ggggccaggc cacctccttc cccagctctc ttgtctcatg
601 tttgtgggtg agtgtttgca ctgagtcccg gggcagctgt ggagccacct attctttatt
661 tcttcaccca gtgaccctgg tctgtgtgct cactgcccag gtggccatgc aggccctgct
721 gggggcagcg ggcctggcct tatcagagct acgtcgcaga ggtgttgact cacggcctca
781 ccctggccct gggacgggcc tggcagtgac ttcctgctct gcaactgcag tctctcaggc
841 gtgtgctgcg gggatgtggg cacgcaggcc cgtgtgagct ttggaccgtg aagccagtaa
901 ccttcctgca gggccaggct gagcatacta tgtccatctc cctgggtgga cgtgcggctg
961 cctgtccctg aggtgaggtg ctcggtctcc ttcccgctgg tctggctccc aagaccagaa
1021 catgcgagga caacagagaa cacagaagag agagcaaaac agacagcgcc gcacgtccct
1081 ctggctggcg cccatgcggc tctacacgct ctccaagcgc cactttgtcc tcgtgtttgt
1141 cgtcttcttc atctgctttg gcctgaccat cttcgttggg atcagaggac ctaaagtgat
1201 ccagacttct gcggctaatt tttcactaaa taatagcaaa aagctaaagc caattcaaat
1261 actttcaaat ccactgtcta catacaatca gcaactatgg ctgacatgtg ttgttgagtt
1321 ggatcaatca aaagaaactt ctattaagac aagctttccc atgactgtta aagtcgatgg
1381 tgtagctcaa gatggaacca cgatgtacat tcataacaaa gttcacaacc ggacaaggac
1441 cctcacatgt gcagggaaat gtgcggagat tattgtggct caccttggct acctgaacta
1501 cactcagtat acagtgatag tgggatttga acacctgaag ctcccc
//