LOCUS AY927426 1338 bp mRNA linear HTC 22-JUL-2005
DEFINITION Homo sapiens mRNA sequence.
ACCESSION AY927426
VERSION AY927426.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1338)
AUTHORS Cheng,J., Kapranov,P., Drenkow,J., Dike,S., Brubaker,S., Patel,S.,
Long,J., Stern,D., Tammana,H., Helt,G., Sementchenko,V.,
Piccolboni,A., Bekiranov,S., Bailey,D.K., Ganesh,M., Ghosh,S.,
Bell,I., Gerhard,D.S. and Gingeras,T.R.
TITLE Transcriptional maps of 10 human chromosomes at 5-nucleotide
resolution
JOURNAL Science 308 (5725), 1149-1154 (2005)
PUBMED 15790807
REFERENCE 2 (bases 1 to 1338)
AUTHORS Kapranov,P., Drenkow,J., Cheng,J., Long,J., Helt,G., Dike,S. and
Gingeras,T.R.
TITLE Examples of the complex architecture of the human transcriptome
revealed by RACE and high-density tiling arrays
JOURNAL Genome Res. 15 (7), 987-997 (2005)
PUBMED 15998911
REFERENCE 3 (bases 1 to 1338)
AUTHORS Kapranov,P., Drenkow,J., Cheng,J., Long,J., Helt,G., Dike,S. and
Gingeras,T.R.
TITLE Direct Submission
JOURNAL Submitted (09-FEB-2005) Affymetrix, 3380 Central Expressway, Santa
Clara, CA 95051, USA
COMMENT Cloned RT-PCR products representing transcripts identified by the
combination of RACE and tiling array analyses. The products were
amplified from DNaseI-treated cytosolic polyA+ RNA from a pool of
four cell lines (HepG2, Jurkat, FHs 738Lu and U87 MG) and cloned
into pGEM-T Easy vector.
FEATURES Location/Qualifiers
source 1..1338
/db_xref="H-InvDB:HIT000332588"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_line="pool of RNA from Jurkat (ATCC No. TIB-152),
HepG2 (ATCC No. HTB-8065), FHs 738Lu (ATCC No. HTB-157),
U87MG (ATCC No. HTB-14)"
/note="GTSE1-1-1_5p_5"
BASE COUNT 359 a 337 c 332 g 310 t
ORIGIN
1 aattcgattc aagtgaattt gcaagtattc ctgcaaatag ctcccggcct ctgtcaaaca
61 tcagcaagtc aggcagaatg ggacccgcca tgctgcggcc agctctgcct gcaggccctg
121 tgggggcatc ctcctggcag gccaagcggg tcgatgtttc tgagctggca gcggagcagc
181 tcacggcacc cccctcagca tcccccaccc aaccccagac tccggaaggt ggcggccagt
241 ggctgaactc cagttgcgct tggtcagaat cttctcaatt gaataagact agaagtatca
301 gacggcgaga ttcctgtcta aattccaaga caaaggttat gcctactcct acaaatcaat
361 ttaaaattcc taagttttct attggtgact ccccggacag ctcaacacca aagctttcgc
421 gggcacagcg gccgcagtcg tgcacgtcag ttggcagggt cactgtccac agcaccccgg
481 ttagacgctc atctgggcca gcaccacaaa gcctgctgag cgcacggcgt gtgtcagcct
541 tgcccacacc cgccagccgg cgctgctctg gccttccacc gatgaccccc aaaacgatgc
601 ccagggccgt gggctctccc ctgtgtgtgc cagctcggag acgttcctct gagccctgca
661 agaactctgc aatgaggtaa gacacgaagg tggtaataaa ttggtctcaa attcctaggc
721 ttgctgtccc agacagtgac ataccttttt cttgccctgc tccaggtttt agtgaagtaa
781 atagtatttg gaaagtttgt ttgttttttt tttcattgca aagagaaaat gcaatagaca
841 tgagcataga ggaaaattaa aggtattaca aggaaatact gcgtgtaatt ctctgataat
901 caatttgaaa acctaatggt tttctaaaat ttgcaagtta ttggccaggt gtggtggctc
961 acgcctgtaa tcccagcact ttgggaggcc gaggcaggca gactgcctga gctcaggagt
1021 ttgagatcaa cctgggtaac atggcaaaac cccatctcta caaaaaatac aaaaataagc
1081 taggtgtggt ggcgtgcact gtagtcccag ctatttaggg ggctgaggtg ggaggatcac
1141 ttgagctcag gaggttgcgg ctgcagtgag ctgagattgc cccgttgcac tccagcctgg
1201 gggacagagt gagaccccgt ctgtaaaaat taaaataaat aaaataaata aaataaaatt
1261 tatctaaatt gacccagaac acatgaagta agccatagct ggagctcaga aatgattaaa
1321 gattgaaaaa ggcacctg
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