LOCUS AY920281 2110 bp mRNA linear HUM 12-APR-2005
DEFINITION Homo sapiens sperm adhesion molecule 1 variant 1B2 (SPAM1) mRNA,
complete cds, alternatively spliced.
ACCESSION AY920281
VERSION AY920281.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2110)
AUTHORS Dunn,C.A. and Mager,D.L.
TITLE Transcription of the human and rodent SPAM1 / PH-20 genes initiates
within an ancient endogenous retrovirus
JOURNAL BMC Genomics 6 (1), 47 (2005)
PUBMED 15804358
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2110)
AUTHORS Dunn,C.A. and Mager,D.L.
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2005) Terry Fox Laboratory, BC Cancer Agency, 675
W 10th Ave, Vancouver, BC V5Z 1L3, Canada
FEATURES Location/Qualifiers
source 1..2110
/db_xref="H-InvDB:HIT000258867"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="7"
/map="7q31"
gene 1..2110
/gene="SPAM1"
CDS 504..2033
/gene="SPAM1"
/note="alternatively spliced"
/codon_start=1
/product="sperm adhesion molecule 1 variant 1B2"
/protein_id="AAX13988.1"
/translation="MGVLKFKHIFFRSFVKSSGVSQIVFTFLLIPCCLTLNFRAPPVI
PNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYI
DSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKP
KDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGY
YLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATL
YVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGAS
GIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMCSQVLCQEQGVCIRKNW
NSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVK
DTDAVDVCIADGVCIDAFLKPPMETEEPQIFYNASPSTLSATMFIVSILFLIISSVAS
L"
BASE COUNT 674 a 398 c 418 g 620 t
ORIGIN
1 aaaggaggga acctaatgta agaatactga atttgccaat taaggcacca gctgtgacta
61 cttcatacag gaatggggac atgcctgatg ccatagggtc taattgactt gagaatgtga
121 aaggaaaata aaaactcaga accccaattc atcatgccaa aaggaaaaaa aaattaagct
181 gaaatggatg ctaatgacta gccaatgctc taggaagaca ttgagaccag ccaacttctt
241 gccttgataa ctactgaaga gacattgggt ggctggattt tgaaagcaga cttctggtta
301 taggtgatgc aacttgaaaa acaatcctga aacatgaaac aagaataata atatttaaat
361 gtaacttaat cattatacct ctttatccat caaagtgaat tcattccatt ccctttcatc
421 tgtgctcata ctttgcatca gatattgggt aaaccaaagt gtgtaggaag aaataaatgt
481 tttcatagtc attactcttt acaatgggag tgctaaaatt caagcacatc tttttcagaa
541 gctttgttaa atcaagtgga gtatcccaga tagttttcac cttccttctg attccatgtt
601 gcttgactct gaatttcaga gcacctcctg ttattccaaa tgtgcctttc ctctgggcct
661 ggaatgcccc aagtgaattt tgtcttggaa aatttgatga gccactagat atgagcctct
721 tctctttcat aggaagcccc cgaataaacg ccaccgggca aggtgttaca atattttatg
781 ttgatagact tggctactat ccttacatag attcaatcac aggagtaact gtgaatggag
841 gaatccccca gaagatttcc ttacaagacc atctggacaa agctaagaaa gacattacat
901 tttatatgcc agtagacaat ttgggaatgg ctgttattga ctgggaagaa tggagaccca
961 cttgggcaag aaactggaaa cctaaagatg tttacaagaa taggtctatt gaattggttc
1021 agcaacaaaa tgtacaactt agtctcacag aggccactga gaaagcaaaa caagaatttg
1081 aaaaagcagg gaaggatttc ctggtagaga ctataaaatt gggaaaatta cttcggccaa
1141 atcacttgtg gggttattat ctttttccgg attgttacaa ccatcactat aagaaacccg
1201 gttacaatgg aagttgcttc aatgtagaaa taaaaagaaa tgatgatctc agctggttgt
1261 ggaatgaaag cactgctctt tacccatcca tttatttgaa cactcagcag tctcctgtag
1321 ctgctacact ctatgtgcgc aatcgagttc gggaagccat cagagtttcc aaaatacctg
1381 atgcaaaaag tccacttccg gtttttgcat atacccgcat agtttttact gatcaagttt
1441 tgaaattcct ttctcaagat gaacttgtgt atacatttgg cgaaactgtt gctctgggtg
1501 cttctggaat tgtaatatgg ggaaccctca gtataatgcg aagtatgaaa tcttgcttgc
1561 tcctagacaa ttacatggag actatactga atccttacat aatcaacgtc acactagcag
1621 ccaaaatgtg tagccaagtg ctttgccagg agcaaggagt gtgtataagg aaaaactgga
1681 attcaagtga ctatcttcac ctcaacccag ataattttgc tattcaactt gagaaaggtg
1741 gaaagttcac agtacgtgga aaaccgacac ttgaagacct ggagcaattt tctgaaaaat
1801 tttattgcag ctgttatagc accttgagtt gtaaggagaa agctgatgta aaagacactg
1861 atgctgttga tgtgtgtatt gctgatggtg tctgtataga tgcttttcta aaacctccca
1921 tggagacaga agaacctcaa attttctaca atgcttcacc ctccacacta tctgccacaa
1981 tgttcattgt tagtattttg tttcttatca tttcttctgt agcgagtttg taattgcgca
2041 ggttagctga aatgaacaat atgtccatct taaagtgtgc tttttcgact aattaaatct
2101 ttgaaaagaa
//