LOCUS AY920280 2195 bp mRNA linear HUM 12-APR-2005
DEFINITION Homo sapiens sperm adhesion molecule 1 variant 1B1 (SPAM1) mRNA,
complete cds, alternatively spliced.
ACCESSION AY920280
VERSION AY920280.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2195)
AUTHORS Dunn,C.A. and Mager,D.L.
TITLE Transcription of the human and rodent SPAM1 / PH-20 genes initiates
within an ancient endogenous retrovirus
JOURNAL BMC Genomics 6 (1), 47 (2005)
PUBMED 15804358
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2195)
AUTHORS Dunn,C.A. and Mager,D.L.
TITLE Direct Submission
JOURNAL Submitted (02-FEB-2005) Terry Fox Laboratory, BC Cancer Agency, 675
W 10th Ave, Vancouver, BC V5Z 1L3, Canada
FEATURES Location/Qualifiers
source 1..2195
/db_xref="H-InvDB:HIT000258866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="7"
/map="7q31"
gene 1..2195
/gene="SPAM1"
CDS 589..2118
/gene="SPAM1"
/note="alternatively spliced"
/codon_start=1
/product="sperm adhesion molecule 1 variant 1B1"
/protein_id="AAX13987.1"
/translation="MGVLKFKHIFFRSFVKSSGVSQIVFTFLLIPCCLTLNFRAPPVI
PNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYI
DSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKP
KDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGY
YLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATL
YVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGAS
GIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMCSQVLCQEQGVCIRKNW
NSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVK
DTDAVDVCIADGVCIDAFLKPPMETEEPQIFYNASPSTLSATMFIVSILFLIISSVAS
L"
BASE COUNT 703 a 411 c 432 g 649 t
ORIGIN
1 aaaggaggga acctaatgta agaatactga atttgccaat taaggcacca gctgtgacta
61 cttcatacag gaatggggac atgcctgatg ccatagggtc taattgactt gagaatgtga
121 aaggaaaata aaaactcaga accccaattc atcatgccaa aaggaaaaaa aaattaagct
181 gaaatgttaa atactgcaga gctaatagat tggagtgact tctgacctag tcacatctta
241 aaggaaaact tttcagtttt tactttaaaa ggatgctaat gactagccaa tgctctagga
301 agacattgag accagccaac ttcttgcctt gataactact gaagagacat tgggtggctg
361 gattttgaaa gcagacttct ggttataggt gatgcaactt gaaaaacaat cctgaaacat
421 gaaacaagaa taataatatt taaatgtaac ttaatcatta tacctcttta tccatcaaag
481 tgaattcatt ccattccctt tcatctgtgc tcatactttg catcagatat tgggtaaacc
541 aaagtgtgta ggaagaaata aatgttttca tagtcattac tctttacaat gggagtgcta
601 aaattcaagc acatcttttt cagaagcttt gttaaatcaa gtggagtatc ccagatagtt
661 ttcaccttcc ttctgattcc atgttgcttg actctgaatt tcagagcacc tcctgttatt
721 ccaaatgtgc ctttcctctg ggcctggaat gccccaagtg aattttgtct tggaaaattt
781 gatgagccac tagatatgag cctcttctct ttcataggaa gcccccgaat aaacgccacc
841 gggcaaggtg ttacaatatt ttatgttgat agacttggct actatcctta catagattca
901 atcacaggag taactgtgaa tggaggaatc ccccagaaga tttccttaca agaccatctg
961 gacaaagcta agaaagacat tacattttat atgccagtag acaatttggg aatggctgtt
1021 attgactggg aagaatggag acccacttgg gcaagaaact ggaaacctaa agatgtttac
1081 aagaataggt ctattgaatt ggttcagcaa caaaatgtac aacttagtct cacagaggcc
1141 actgagaaag caaaacaaga atttgaaaaa gcagggaagg atttcctggt agagactata
1201 aaattgggaa aattacttcg gccaaatcac ttgtggggtt attatctttt tccggattgt
1261 tacaaccatc actataagaa acccggttac aatggaagtt gcttcaatgt agaaataaaa
1321 agaaatgatg atctcagctg gttgtggaat gaaagcactg ctctttaccc atccatttat
1381 ttgaacactc agcagtctcc tgtagctgct acactctatg tgcgcaatcg agttcgggaa
1441 gccatcagag tttccaaaat acctgatgca aaaagtccac ttccggtttt tgcatatacc
1501 cgcatagttt ttactgatca agttttgaaa ttcctttctc aagatgaact tgtgtataca
1561 tttggcgaaa ctgttgctct gggtgcttct ggaattgtaa tatggggaac cctcagtata
1621 atgcgaagta tgaaatcttg cttgctccta gacaattaca tggagactat actgaatcct
1681 tacataatca acgtcacact agcagccaaa atgtgtagcc aagtgctttg ccaggagcaa
1741 ggagtgtgta taaggaaaaa ctggaattca agtgactatc ttcacctcaa cccagataat
1801 tttgctattc aacttgagaa aggtggaaag ttcacagtac gtggaaaacc gacacttgaa
1861 gacctggagc aattttctga aaaattttat tgcagctgtt atagcacctt gagttgtaag
1921 gagaaagctg atgtaaaaga cactgatgct gttgatgtgt gtattgctga tggtgtctgt
1981 atagatgctt ttctaaaacc tcccatggag acagaagaac ctcaaatttt ctacaatgct
2041 tcaccctcca cactatctgc cacaatgttc attgttagta ttttgtttct tatcatttct
2101 tctgtagcga gtttgtaatt gcgcaggtta gctgaaatga acaatatgtc catcttaaag
2161 tgtgcttttt cgactaatta aatctttgaa aagaa
//