LOCUS AY894567 2759 bp mRNA linear HUM 18-OCT-2005
DEFINITION Homo sapiens clone Ia4 NBPF8 isoform 2 mRNA, complete cds,
alternatively spliced.
ACCESSION AY894567
VERSION AY894567.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2759)
AUTHORS Vandepoele,K., Van Roy,N., Staes,K., Speleman,F. and van Roy,F.
TITLE A novel gene family NBPF: intricate structure generated by gene
duplications during primate evolution
JOURNAL Mol. Biol. Evol. 22 (11), 2265-2274 (2005)
PUBMED 16079250
REFERENCE 2 (bases 1 to 2759)
AUTHORS van Roy,F., Vandepoele,K., Van Roy,N., Staes,K. and Speleman,F.
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2005) Dept. Molecular Biomedical Research,
VIB/Ghent University, Technologiepark 927, Ghent (Zwijnaarde) 9052,
Belgium
FEATURES Location/Qualifiers
source 1..2759
/db_xref="H-InvDB:HIT000332517_02"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="Ia4"
/tissue_type="mammary gland"
5'UTR 1..174
exon 1..37
/experiment="experimental evidence, no additional details
recorded"
misc_feature 38..139
/experiment="experimental evidence, no additional details
recorded"
/note="intron retained in cDNA"
exon 140..347
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 1A"
CDS 175..1548
/note="alternatively spliced"
/codon_start=1
/product="NBPF8 isoform 2"
/protein_id="AAX85106.1"
/translation="MVVSAGPWSSEKAEMNILEINEKLRPQLAENKQQFVNLKEMFSN
STGRLPGQPTEEIQQYKVLVHSQERELTQLKEKLREGRDASRSLNEHLQALLTLDEPD
KSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVQKSSAPREVQKAE
VSKVPEDSLEECAITCSNSHGPCDFNQPHKNIKITFEEDEVNSTLVVDRESSHDECQD
ALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLHPQLAEKKQQFRNLKE
KCFLTQLAGFLANQQNKYKYEECKDLIKSMLRNERQFKEEKLAEQLKQAEELRQYKVL
VHTQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQ
HLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNS
HGPYDSN"
exon 348..562
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 3"
exon 563..635
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 4"
exon 636..847
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 5"
exon 848..1057
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 1"
exon 1058..1160
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 2"
exon 1161..1375
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 3"
exon 1376..1448
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 4"
exon 1449..1654
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 6"
3'UTR 1549..2759
exon 1655..1706
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 7"
exon 1707..1758
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 9"
exon 1759..1931
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 10"
exon 1932..1983
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 13"
exon 1984..2156
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 10"
exon 2157..2208
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 13"
exon 2209..2381
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 11"
exon 2382..2490
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 12"
exon 2491..2734
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 14"
BASE COUNT 838 a 632 c 710 g 579 t
ORIGIN
1 aaaagtgctg tggggagtga tcacattttt cacaacagta aggtaagaat ttcagttact
61 gacatccctc agtcctgatt aaacctattt gatttcacca gtttttaacc catcatatgt
121 ttgagtttct tctccccagt ccctgactcc acctcttctg ccacaaacgt cagcatggtg
181 gtatcagccg gcccttggtc cagcgagaag gcagagatga acattctaga aatcaacgag
241 aaattgcgcc cccagttggc agagaacaaa cagcagttcg taaacctcaa agagatgttt
301 tctaactcaa ctggccggct tcctggccaa ccgacagaag aaatacagca atataaagtc
361 ctggttcact ctcaggaacg agagctgacg cagttaaagg agaagttacg ggaagggaga
421 gatgcctccc gctcattgaa tgagcatctc caggccctcc tcactctgga tgagccggac
481 aagtcccagg ggcaggacct ccaagaacag ctggctgagg ggtgtagact ggcacagcac
541 cttgtccaaa agctcagccc agaaaatgac gaagatgagg atgaagatgt tcaagttgag
601 gaggatgaga aagtgcagaa atcatctgcc cccagggagg tgcagaaggc tgaagtgagc
661 aaagtccctg aggactcact ggaggaatgt gccatcactt gttcaaatag ccacgggcct
721 tgtgacttca accagcctca caagaacatc aaaatcacat ttgaggaaga cgaagtcaac
781 tcaactctgg ttgtagacag agaatcctct catgatgaat gtcaggatgc tctaaacatt
841 ctcccagtcc ctggccccac ctcttctgcc acaaacgtca gcatggtggt atcagccggc
901 cctttgtcca gcgagaaggc agagatgaac attctagaaa tcaatgagaa attgcacccc
961 cagctggcag agaagaaaca gcagttcaga aacctcaaag agaaatgttt tctaactcaa
1021 ctggccggct tcctggccaa ccagcagaac aaatacaaat atgaagagtg caaagatctc
1081 ataaaatcta tgctgaggaa tgagcgacag ttcaaggagg agaagcttgc agagcagctc
1141 aagcaagctg aggagctcag gcaatataaa gtcctggttc acactcagga acgagagctg
1201 acccagttaa gggagaagtt gcgggaaggg agagatgcct cccgctcatt gaatgagcat
1261 ctccaggccc tcctcactcc ggatgagccg gacaagtccc aggggcagga cctccaagaa
1321 cagctggctg aggggtgtag actggcacag caccttgtcc aaaagctcag cccagaaaat
1381 gacaacgatg acgatgaaga tgttcaagtt gaggtggctg agaaagtgca gaaatcgtct
1441 gcccccaggg agatgcagaa ggctgaagaa aaggaagtcc ctgaggactc actggaggaa
1501 tgtgccatca cttattcaaa tagccatggc ccttatgact ccaactagcc acataggaaa
1561 accaaaatca catttgagga agacaaagtc gactcagctc tcattggctc atcctctcat
1621 gttgaatggg aggatgctgt acacattatt ccagaaaatg aaagtgatga tgaggaagag
1681 gaagaaaaag ggccagtgtc tcccaggaca tcggtggaat caagtgaaaa aggaggacca
1741 agaggcaaca ggtcccaggc tcagcaggga gctgctggat gagaaagggc ctgaagtctt
1801 gcaggactca ctggatagat gttattcaac tccttcaggt tgccttgaac tgactgactc
1861 atgccagccc tacagaagtg ccttttacat attggagcaa cagcgtgttg gcttggctgt
1921 tgacatggat gaaattgaaa agtaccaaga agtggaagaa gaccaagacc catcatgccc
1981 caggctcagc agggagctgc tggatgagaa agagcctgaa gtcttgcagg actcactgga
2041 tagatgttat tcgactcctt caggttatct tgaactgcct gacttaggcc agccctacag
2101 cagtgctgtt tactcattgg aggaacagta ccttggcttg gctcttgacg tggacagaat
2161 taaaaaggac caagaagagg aagaagacca aggcccacca tgccccaggc tcagcaggga
2221 gctgctggag gtagtagagc ctgaagtctt gcaggactca ctggatagat gttattcaac
2281 tccttccagt tgtcttgaac agcctgactc ctgccagccg tatggaagtt ccttttatgc
2341 attggaggaa aaacatgttg gcttttctct tgacgtggga gaaattgaaa agaaggggaa
2401 ggggaagata agaaggggaa gaagatcaga gaagaaaaga agaaggggaa gaaaagaagg
2461 ggaagaagat caaaacccac catgccccag gctcaacagc gtgctgatgg aagtggaaga
2521 gcctgaagtc ttacaggact cactggatag atgttattcg actccatcaa tgtactgtga
2581 actacgtgac tcattccagc actacagaag tgtgttttac tcatttgagg aacagcacat
2641 cagctttgcc cttgacatgg acaataggtt ctttactttg acggtgacaa gtctctatct
2701 ggtcttccag atgggagtca tattcccaca ataagcagcc cttactaagc cgagagatg
//