LOCUS AY894566 2111 bp mRNA linear HUM 18-OCT-2005
DEFINITION Homo sapiens clone IIIb5 NBPF15 mRNA, complete cds.
ACCESSION AY894566
VERSION AY894566.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2111)
AUTHORS Vandepoele,K., Van Roy,N., Staes,K., Speleman,F. and van Roy,F.
TITLE A novel gene family NBPF: intricate structure generated by gene
duplications during primate evolution
JOURNAL Mol. Biol. Evol. 22 (11), 2265-2274 (2005)
PUBMED 16079250
REFERENCE 2 (bases 1 to 2111)
AUTHORS van Roy,F., Vandepoele,K., Van Roy,N., Staes,K. and Speleman,F.
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2005) Dept. Molecular Biomedical Research,
VIB/Ghent University, Technologiepark 927, Ghent (Zwijnaarde) 9052,
Belgium
FEATURES Location/Qualifiers
source 1..2111
/db_xref="H-InvDB:HIT000332516"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IIIb5"
/cell_line="SK-N-SH"
5'UTR 1..72
/experiment="experimental evidence, no additional details
recorded"
exon 1..37
/experiment="experimental evidence, no additional details
recorded"
exon 38..247
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 1"
CDS 73..2085
/codon_start=1
/product="NBPF15"
/protein_id="AAX85105.1"
/translation="MVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFL
TQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQ
ERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLTQHLVQ
KLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITCSNSHGPY
DSNQPHKKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRN
LQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWD
QVKKEDQEATGPRLSRELLDEKEPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVL
EQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSDY
LELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEP
EVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRR
GRRSKKKRRRGRKEGEDDNPPCPRLYGVLMEVEEPEVLQDSLDRCYSTPSMYFEQPDS
FQHYRSVFYSFEEEHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ"
exon 248..350
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 2"
exon 351..565
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 3"
exon 566..638
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 4"
exon 639..844
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 6"
exon 845..896
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 7"
exon 897..1060
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type of 8"
exon 1061..1112
/note="exon of type 9"
exon 1113..1285
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 10"
exon 1286..1337
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 13"
exon 1338..1510
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 10"
exon 1511..1562
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 13"
exon 1563..1735
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 11"
exon 1736..1841
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 12"
exon 1842..2085
/experiment="experimental evidence, no additional details
recorded"
/note="exon of type 14"
3'UTR 2086..2111
BASE COUNT 638 a 466 c 558 g 449 t
ORIGIN
1 aaaagtgctg tggggagtga tcacattttt gacaacatcc ctgactccac ctcttctgcc
61 acaaacgtca gcatggtggt atcggccggc cctttgtcca gcgagaaggc agagatgaac
121 attctagaaa tcaatgagaa attgcgcccc cagttggcag agaagaaaca gcagttcaga
181 aacctcaaag agaaatgttt tctaactcaa ctggccggct tcctggccaa ccgacagaag
241 aaatacaaat atgaagagtg caaagatctc ataaaattta tgctgaggaa tgagcgacag
301 ttcaaggagg agaagcttgc agagcagctc aagcaagctg aggagctcag gcaatataaa
361 gtcctggttc acgctcagga acgagagctg acccagttaa gggagaagtt acgggaaggg
421 agagatgcct cccgctcatt gaatgagcat ctccaggccc tcctcactcc ggatgagccg
481 gacaagtccc aggggcagga cctccaagaa cagctggctg aggggtgtag actgacacag
541 caccttgtcc aaaagctcag cccagaaaat gacaacgatg acgatgaaga tgttcaagtt
601 gaggtggctg agaaagtgca gaaatcgtct gcccccaggg agatgcagaa ggctgaagaa
661 aaggaagtcc ctgaggactc actggaggaa tgtgccatca cttgttcaaa tagccatggc
721 ccttatgact ccaaccagcc acataagaaa accaaaatca catttgagga agacaaagtc
781 gactcaactc tcattggctc atcctctcat gttgaatggg aggatgctgt acacattatt
841 ccagaaaatg aaagtgatga tgaggaagag gaagaaaaag ggccagtgtc tcccaggaat
901 ctgcaggagt ctgaagagga ggaagtcccc caggagtcct gggatgaagg ttattcgact
961 ctctcaattc cccctgaaat gttggcctcg taccagtctt acagcagcac atttcactca
1021 ttagaggaac agcaagtctg catggctgtt gacataggca gacatcggtg ggatcaagtg
1081 aaaaaggagg accaagaggc aacaggtccc aggctcagca gggagctgct ggatgagaaa
1141 gagcctgaag tcttgcagga ctcactggat agatgttatt caactccttc aggttgtctt
1201 gaactgactg actcatgcca gccctacaga agtgcctttt acgtattgga gcaacagcgt
1261 gttggcttgg ctattgacat ggatgaaatt gaaaagtacc aagaagtgga agaagaccaa
1321 gacccatcat gccccaggct cagcagggag ctgctggatg agaaagagcc tgaagtcttg
1381 caggactcac tggatagatg ttattcgact ccttcagatt atcttgaact gcctgactta
1441 ggccagccct acagcagtgc tgtttactca ttggaggaac agtaccttgg cttggctctt
1501 gacgtggaca gaattaaaaa ggaccaagaa gaggaagaag accaaggccc accatgcccc
1561 aggctcagca gggagctgct ggaggtagta gagcctgaag tcttgcagga ctcactggat
1621 agatgttatt caactccttc cagttgtctt gaacagcctg actcctgcca gccctatgga
1681 agttcctttt atgcattgga ggaaaaacat gttggctttt ctcttgacgt gggagaaatt
1741 gaaaagaagg ggaaggggaa gaaaagaagg ggaagaagat caaagaagaa aagaagaagg
1801 ggaagaaaag aaggggaaga tgacaaccca ccatgcccca ggctctacgg cgtgctgatg
1861 gaagtggaag agcctgaagt cttacaggac tcactggata gatgttattc gactccgtca
1921 atgtactttg aacaacctga ctcattccag cactacagaa gtgtgtttta ctcatttgag
1981 gaagagcata tcagcttcgc cctttacgtg gacaataggt tttttacttt gacggtgaca
2041 agtctccacc tggtgttcca gatgggagtc atattcccac aataagcagc tcttactaag
2101 ccgagagatg t
//