LOCUS AY736182 6525 bp mRNA linear HUM 02-OCT-2004
DEFINITION Homo sapiens ninein isoform 6 mRNA, complete cds, alternatively
spliced.
ACCESSION AY736182
VERSION AY736182.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6525)
AUTHORS Hong,Y.-R., Wu,C.-H. and Cheng,T.-S.
TITLE Characterization, expression and functional aspects of human ninein
isoforms
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6525)
AUTHORS Hong,Y.-R., Wu,C.-H. and Cheng,T.-S.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) Graduate Institute of Biochem, Kaohsiung
Medical University, 100 Shih-Chuang 1st Rd, Kaohsiung, Taiwan 897,
Taiwan, ROC
FEATURES Location/Qualifiers
source 1..6525
/db_xref="H-InvDB:HIT000257416"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="14"
CDS 192..6161
/note="alternatively spliced"
/codon_start=1
/product="ninein isoform 6"
/protein_id="AAU86898.1"
/translation="MDEVEQDQHEARLKELFDSFDTTGTGSLGQEELTDLCHMLSLEE
VAPVLQQTLLQDNLLGRVHFDQFKEALILILSRTLSNEEHFQEPDCSLEAQPKYVRGG
KRYGRRSLPEFQESVEEFPEVTVIEPLDEEARPSYIPAGDCSEHWKTQRSEEYEAEGQ
LRFWNPDDLNASQSGSSPPQDWIEEKLQEVCEDLGITRDGHLDRKKLVSICEQYGLQN
VDGEILEEVFHNLDPDGTMSVEDFFYGLFKNGKSLTPSASTPYRQLKRHLSMQSFDES
GRRTTTSSAMTSTIGFRVISCLDDGMGHASVERILDTWQEEGIENSQEILKALDFSLD
GNINLTELTLALENELLVTKNSIHQAALASFKAEVRHLLERVDQVVREKEKLRSDLDK
AEKLKSSMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRKEREQILQQAGK
QRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEKLAEYENLTNKLQRNL
ENVLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQVDELQSELEEYRAQGR
VFRLPLKNSPSEEVEANSGGIEPEHGLGSEECNPLNMSIEAELVIEQMKEQHHRDICC
LRLELEDKVRHYEKQLDETVVSCKKAQENMKQRHENETHTLEKQISDLKNEIAELQGQ
AAVLKEAHHEATCRHEEEKKQLQVKLEEEKTHLQEKLRLQHEMELKARLTQAQASFER
EREGLQSSAWTEEKVRGLTQELEQFHQEQLTSLVEKHTLEKEELRKELLEKHQRELQE
GREKMETECNRRTTQIEAQFQSDCQKVTERCESALQSLEGRYRQELKDLQEQQREEKS
QWEFEKDELTQECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLNSMVVERQQ
LLQDLEDLRNVSETQQSLLSDQILELKSSHIRELREREEVLCQAGASEQLASQRLERL
EMEHAQERQEMMSKLLAMENIHKATCETADRERAEMSTEISRLQSKIKEMQQATSPLS
MLQSGCQVIGEEEVEGDGALSLLHQGEQLLEENGDVFLSLQRAHEQAVKENVKMATEI
SRLQQRLQKLEPGLVMSSCLDEPATEFFGNTAEQTEPFLQQNRTKQVEGVTRRHVLSD
LEDDEVRDLGSTGTSSVQRQEVKIEESEASVEGFSELENSEETRTESWELKNQISQLQ
EQLMMLCADCDRASEKKQDLLFDVSVLKKKLKMLERIPEASPKYKLLYEDVSRENDCL
QEELRMMETRYDEALENNKELTAEVFRLQDELKKMEEVTETFLSLEKSYDEVKIENEE
LNVLVLRLQGKIEKLQESVVQRCDCCLWEASLENLEIEPDGNILQLNQTLEECVPRVR
SVHHVIEECKQENQYLEGNTQLLEKVKAHEIAWLHGTIQTHQERPRVQNQVILEENTT
LLGFQDKHFQHQATIAELELEKTKLQELTRKLKERVTILVKQKDVLSHGEKEEELKAM
MHDLQITCSEMQQKVELLRYESEKLQQENSILRNEITTLNEEDSISNLKLGTLNGSQE
EMWQKTETVKQENAAVQKMVENLKKQISELKIKNQQLDLENTELSQKNSQNQEKLQEL
NQRLTEMLCQKEKEPGNSALEEREQEKFNLKEELERCKVQSSTLVSSLEAELSEVKIQ
THIVQQENHLLKDELEKMKQLHRCPDLSDFQQKISSVLSYNEKLLKEKEALSEELNSC
VDKLAKSSLLEHRIATMKQEQKSWEHQSASLKSQLVASQEKVQNLEDTVQNVNLQMSR
MKSDLRVTQQEKEALKQEVMSLHKQLQNAGGKSWAPEIATHPSGLHNQQKRLSWDKLD
HLMNEEQQLLWQENERLQTMVQNTKAELTHSREKVRQLESNLLPKHQKHLNPSGTMNP
TEQEKLSLKRECDQFQKEQSPANRKVSQMNSLEQELETIHLENEGLKKKQVKLDEQLM
ENSVVGSSREGCSSLPEIVCEDAAPEVHCDA"
BASE COUNT 2156 a 1319 c 1765 g 1285 t
ORIGIN
1 ccgagccggg agccgagcgc gctgggcgcg gccgtcccgc tgccgccgcc aagcccggag
61 tgcgccagcg gccatggttc ccgcggcggc gccgggcgcc tgagccccgg gacgcaagcg
121 ctggaggcgg gctgccggct gtgcgggcgc tccggagaga ccgacagaag gtgagcactg
181 tgggctatgg gatggatgag gtggagcagg accagcatga ggcccgactc aaggagctgt
241 ttgacagttt tgacacgacg ggcacagggt ccctggggca ggaggaactc accgaccttt
301 gccacatgtt gagcttggag gaggtggccc cagtgctgca gcagacatta cttcaggaca
361 acctcttggg cagggtacat tttgaccaat ttaaagaagc attaatactc atcttgtcca
421 gaactctgtc aaatgaagaa cactttcaag aaccagactg ctcactagaa gctcagccca
481 aatatgttag aggtgggaag cgttacggac gaaggtcctt gcccgagttc caagagtccg
541 tggaggagtt tcctgaagtg acggtgattg agccactgga tgaagaagcg cggccttcat
601 acatcccagc cggtgactgc agtgagcact ggaagacgca acgcagtgag gagtatgaag
661 cggaaggcca gttaaggttt tggaacccag atgacttgaa tgcttcacag agtggatctt
721 cccctcccca agactggata gaagagaaac tgcaagaagt ttgtgaagat ttggggatca
781 cccgtgatgg tcacctggac cggaagaagc tggtctccat ctgtgagcag tatggtttac
841 agaatgtgga tggagagata ctcgaggaag tattccataa tcttgatcct gacggtacaa
901 tgagtgtaga agattttttc tatggtttgt ttaaaaatgg aaaatctctt acaccatcag
961 catctactcc atatagacaa ctaaaaaggc acctttccat gcagtctttc gatgagagtg
1021 gacgacgtac cacaacctca tcagcaatga caagtaccat tggctttcgg gtcatctcct
1081 gcctggatga tgggatgggc catgcatctg tggagagaat actcgacacc tggcaggaag
1141 agggcattga gaacagccag gagatcctga aggccttgga tttcagcctc gatggaaaca
1201 tcaatttgac agaattaaca ctggcccttg aaaatgaact tttggttacc aagaacagca
1261 ttcaccaggc ggctctggcc agttttaagg ctgaagtccg gcatttgttg gaacgagtcg
1321 atcaggtggt cagagaaaaa gagaagctac ggtcagatct ggacaaggcc gagaagctca
1381 agtcttcaat ggcctcggag gtggatgatc accatgcggc catagagcgg cggaatgagt
1441 acaacctcag gaaactggat gaagagtaca aggagcgaat agcagcctta aaaaatgaac
1501 tccgaaagga gagagagcag atcctgcagc aggcaggcaa gcagcgttta gaacttgaac
1561 aggaaattga aaaggcaaaa acagaagaga actatatccg ggaccgcctt gccctctctt
1621 taaaggaaaa cagtcgtctg gaaaatgagc ttctagaaaa tgcagagaag ttggcagaat
1681 atgagaatct gacaaacaaa cttcagagaa atttggaaaa tgtgttagca gaaaagtttg
1741 gtgacctcga tcctagcagt gctgagttct tcctgcaaga agagagactg acacagatga
1801 gaaatgaata tgagcggcag tgcagggtac tacaagacca agtagatgaa ctccagtctg
1861 agctggaaga atatcgcgca caaggcagag tgttcaggct tccgttgaag aactcaccgt
1921 cagaagaagt tgaggctaac agcggtggca ttgagcccga acacgggctc ggttctgaag
1981 aatgcaatcc attgaatatg agcattgagg cagagctggt cattgaacag atgaaagaac
2041 aacatcacag ggacatatgt tgcctcagac tggagctcga agataaagtg cgccattatg
2101 aaaagcagct ggacgaaacc gtggtcagct gcaagaaggc acaggagaac atgaagcaaa
2161 ggcatgagaa cgaaacgcac accttagaaa aacaaataag tgaccttaaa aatgaaattg
2221 ctgaacttca ggggcaagca gcagtgctca aggaggcaca tcatgaggcc acttgcaggc
2281 atgaggagga gaaaaaacaa ctgcaagtga agcttgagga ggaaaagact cacctgcagg
2341 agaagctgag gctgcaacat gagatggagc tcaaggctag actgacacag gctcaagcaa
2401 gctttgagcg ggagagggaa ggccttcaga gtagcgcctg gacagaagag aaggtgagag
2461 gcttgactca ggaactagag cagtttcacc aggagcagct gacaagcctg gtggagaaac
2521 acactcttga gaaagaggag ttaagaaaag agctcttgga aaagcaccaa agggagcttc
2581 aggagggaag ggaaaaaatg gaaacagagt gtaatagaag aaccactcaa atagaagccc
2641 agtttcagtc tgattgtcag aaagtcactg agaggtgtga aagcgctctg caaagcctgg
2701 aggggcgcta ccgccaagag ctgaaggacc tccaggaaca gcagcgtgag gagaaatccc
2761 agtgggaatt tgagaaggac gagctcaccc aggagtgtgc ggaagcacag gagctgctga
2821 aagagactct taagagagag aaaacaactt ctctggtcct gacccaggag agagagatgc
2881 tggagaaaac atacaaagaa catttgaaca gcatggtcgt cgagagacag cagctactcc
2941 aagacctgga agacctaaga aatgtatctg aaacccagca aagcctgctg tctgaccaga
3001 tacttgagct gaagagcagt cacataaggg aactgaggga gcgtgaggag gtcctgtgcc
3061 aggcaggggc ttcggagcag ctggccagcc agcggctgga aagactagaa atggaacatg
3121 cccaggaaag gcaggaaatg atgtccaagc ttctagccat ggagaacatt cacaaagcga
3181 cctgtgagac agcagatcga gaaagagccg agatgagcac agaaatctcc agacttcaga
3241 gtaaaataaa ggaaatgcag caggcaacat ctcctctctc tatgcttcag agtggttgcc
3301 aggtgatagg agaggaggag gtggaaggag atggagccct gtccctgctt caccaagggg
3361 agcagctgtt ggaagaaaat ggggacgttt tcttaagcct gcagagagct catgaacagg
3421 cagtgaagga aaatgtgaaa atggctactg aaatttctag attgcaacag aggctacaaa
3481 agttagagcc aggattagta atgtcttctt gtttggatga gccagctact gagttttttg
3541 gaaatactgc ggaacaaaca gagccgtttt tacagcaaaa ccgaacgaag caagtagaag
3601 gtgtgaccag gcggcatgtc ctaagtgacc tggaagatga tgaggtccgg gacctgggaa
3661 gtacagggac gagctctgtt cagagacagg aagtcaaaat agaggagtct gaagcttcag
3721 tagagggttt ttccgagctt gaaaacagtg aagagaccag gactgaatcc tgggagctga
3781 agaatcagat tagtcagctt caggaacagc taatgatgtt atgtgcggac tgtgatcgag
3841 cttctgaaaa gaaacaggac ctactttttg atgtttctgt gctaaaaaag aaactgaaga
3901 tgcttgagag aatccctgag gcttctccca aatataagct gttgtatgaa gatgtgagcc
3961 gagaaaatga ctgccttcag gaagagctga gaatgatgga gacacgctac gatgaggcac
4021 tagaaaataa caaagaactc actgcagagg ttttcaggtt gcaggatgag ctgaagaaaa
4081 tggaggaagt cactgaaaca ttcctcagcc tggaaaagag ttacgatgag gtcaaaatag
4141 aaaatgagga gctgaatgtt ctggttttga gacttcaagg caagattgag aagcttcagg
4201 aaagcgtggt ccagcggtgt gactgctgct tatgggaagc cagtttagag aacctggaaa
4261 tcgaacctga tggaaatata ctccagctca atcagacact ggaagagtgt gtgcccaggg
4321 ttaggagtgt acatcatgtc atagaggaat gtaagcaaga aaaccagtac cttgagggga
4381 acacacagct cttggaaaaa gtaaaagcac atgaaattgc ctggttacat ggaacaattc
4441 agacacatca agaaaggcca agagtacaga atcaagttat actggaggaa aacactactc
4501 tcctaggctt tcaagacaaa cattttcagc atcaggccac catagcagag ttagaactgg
4561 agaaaacaaa gttacaggag ctgactagga agttgaagga gagagtcact attttagtta
4621 agcaaaaaga tgtactttct cacggagaaa aggaggaaga gctgaaggca atgatgcatg
4681 acttgcagat cacgtgcagt gagatgcagc aaaaagttga acttctgaga tatgaatctg
4741 aaaagcttca acaggaaaat tctattttga gaaatgaaat tactacttta aatgaagaag
4801 atagcatttc taacctgaaa ttagggacat taaatggatc tcaggaagaa atgtggcaaa
4861 aaacggaaac tgtaaaacaa gaaaatgctg cagttcagaa gatggttgaa aatttaaaga
4921 aacagatttc agaattaaaa atcaaaaacc aacaattgga tttggaaaat acagaactta
4981 gccaaaagaa ctctcaaaac caggaaaaac tgcaagaact taatcaacgt ctaacagaaa
5041 tgctatgcca gaaggaaaaa gagccaggaa acagtgcatt ggaggaacgg gaacaagaga
5101 agtttaatct gaaagaagaa ctggaacgtt gtaaagtgca gtcctccact ttagtgtctt
5161 ctctggaggc ggagctctct gaagttaaaa tacagaccca tattgtgcaa caggaaaacc
5221 accttctcaa agatgaactg gagaaaatga aacagctgca cagatgtccc gatctctctg
5281 acttccagca aaaaatctct agtgttctaa gctacaacga aaaactgctg aaagaaaagg
5341 aagctctgag tgaggaatta aatagctgtg tcgataagtt ggcaaaatca agtcttttag
5401 agcatagaat tgcgacgatg aagcaggaac agaaatcctg ggaacatcag agtgcgagct
5461 taaagtcaca gctggtggct tctcaggaaa aggttcagaa tttagaagac accgtgcaga
5521 atgtaaacct gcaaatgtcc cggatgaaat ctgacctacg agtgacacag caggaaaagg
5581 aggctttaaa acaagaagtg atgtctttac ataagcaact tcagaatgct ggtggcaaga
5641 gctgggcccc agagatagct actcatccat cagggctcca taaccagcag aaaaggctgt
5701 cctgggacaa gttggatcat ctgatgaatg aggaacagca gctgctttgg caagagaatg
5761 agaggctcca gaccatggta cagaacacca aagccgaact cacgcactcc cgggagaagg
5821 tccgtcagtt ggaatccaat cttcttccca agcaccaaaa acatctaaac ccatcaggta
5881 ccatgaatcc cacagagcaa gaaaaattga gcttaaagag agagtgtgat cagtttcaga
5941 aagaacaatc tcctgctaac aggaaggtca gtcagatgaa ttcccttgaa caagaattag
6001 aaacaattca tttggaaaat gaaggcctga aaaagaaaca agtaaaactg gatgagcagc
6061 tcatggagaa ctcagtggtt ggaagtagca gagaagggtg cagttctctg cctgagatag
6121 tgtgtgaaga tgcagcacct gaggtccact gcgacgccta gcccgtcccc tcatgcttgg
6181 gatttgcagc tgctccagca gcaagcctgt ccgatggtgc ccagggagca gtttctgcag
6241 cttcaacgcc agctgctgca ggcagaaagg ataaaccagc acctgcagga ggaacttgaa
6301 aacaggacct ccgaaaccaa cacaccacag ggaaaccagg aacaactggt aactgtcatg
6361 gaggaacgaa tgatagaagt tgaacagaaa ctgaaactag tgaaaaggct tcttcaagag
6421 aaagtgaatc agctcaaaga acaagtgagc ctacccggtc atctctgttc acccacctca
6481 cattccagct ttaactccag ttttacatcc ctttattgcc attaa
//