LOCUS       AY680698                1192 bp    mRNA    linear   HUM 10-AUG-2004
DEFINITION  Homo sapiens hepatocyte nuclear factor 4 alpha, transcript variant
            9 (HNF4A) mRNA, complete cds, alternatively spliced.
ACCESSION   AY680698
VERSION     AY680698.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1192)
  AUTHORS   Tanaka,T., Jiang,S., Hotta,H., Takano,K., Iwanari,H., Hirayama,Y.,
            Midorikawa,Y., Hippo,Y., Watanabe,A., Yamashita,H., Kumakura,J.,
            Uchiyama,Y., Hasegawa,G., Aburatani,H., Hamakubo,T., Naito,M.,
            Sakai,J. and Kodama,T.
  TITLE     Variation in P1 and P2 Promoter-Driven Hepatocyte Nuclear Factor-4a
            (HNF4a) Expression in Human Tissues: Implications for
            Carcinogenesis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1192)
  AUTHORS   Tanaka,T., Jiang,S., Hotta,H., Takano,K., Iwanari,H., Hirayama,Y.,
            Midorikawa,Y., Hippo,Y., Watanabe,A., Yamashita,H., Kumakura,J.,
            Uchiyama,Y., Hasegawa,G., Aburatani,H., Hamakubo,T., Naito,M.,
            Sakai,J. and Kodama,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2004) Laboratory for Systems Biology and
            Medicine, Research Center for Advanced Science and Technology,
            University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8904, Japan
FEATURES             Location/Qualifiers
     source          1..1192
                     /db_xref="H-InvDB:HIT000257100"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /cell_line="KatoIII"
     gene            1..1192
                     /gene="HNF4A"
     CDS             5..1192
                     /gene="HNF4A"
                     /note="HNF4a9; alternatively spliced"
                     /codon_start=1
                     /product="hepatocyte nuclear factor 4 alpha, transcript
                     variant 9"
                     /protein_id="AAT91239.1"
                     /translation="MVSVNAPLGAPVESSYDTSPSEGTNLNAPNSLGVSALCAICGDR
                     ATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAG
                     MKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIA
                     SIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK
                     DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPD
                     AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQ
                     FIKLFGMAKIDNLLQEMLLGGPCQAQEGRGWSGDSPGDRPHTVSSPLSSLASPLCRFG
                     QVA"
BASE COUNT          251 a          355 c          364 g          222 t
ORIGIN      
        1 ggccatggtc agcgtgaacg cgcccctcgg ggctccagtg gagagttctt acgacacgtc
       61 cccatcagaa ggcaccaacc tcaacgcgcc caacagcctg ggtgtcagcg ccctgtgtgc
      121 catctgcggg gaccgggcca cgggcaaaca ctacggtgcc tcgagctgtg acggctgcaa
      181 gggcttcttc cggaggagcg tgcggaagaa ccacatgtac tcctgcagat ttagccggca
      241 gtgcgtggtg gacaaagaca agaggaacca gtgccgctac tgcaggctca agaaatgctt
      301 ccgggctggc atgaagaagg aagccgtcca gaatgagcgg gaccggatca gcactcgaag
      361 gtcaagctat gaggacagca gcctgccctc catcaatgcg ctcctgcagg cggaggtcct
      421 gtcccgacag atcacctccc ccgtctccgg gatcaacggc gacattcggg cgaagaagat
      481 tgccagcatc gcagatgtgt gtgagtccat gaaggagcag ctgctggttc tcgttgagtg
      541 ggccaagtac atcccagctt tctgcgagct ccccctggac gaccaggtgg ccctgctcag
      601 agcccatgct ggcgagcacc tgctgctcgg agccaccaag agatccatgg tgttcaagga
      661 cgtgctgctc ctaggcaatg actacattgt ccctcggcac tgcccggagc tggcggagat
      721 gagccgggtg tccatacgca tccttgacga gctggtgctg cccttccagg agctgcagat
      781 cgatgacaat gagtatgcct acctcaaagc catcatcttc tttgacccag atgccaaggg
      841 gctgagcgat ccagggaaga tcaagcggct gcgttcccag gtgcaggtga gcttggagga
      901 ctacatcaac gaccgccagt atgactcgcg tggccgcttt ggagagctgc tgctgctgct
      961 gcccaccttg cagagcatca cctggcagat gatcgagcag atccagttca tcaagctctt
     1021 cggcatggcc aagattgaca acctgttgca ggagatgctg ctgggaggtc cgtgccaagc
     1081 ccaggagggg cggggttgga gtggggactc cccaggagac aggcctcaca cagtgagctc
     1141 acccctcagc tccttggctt ccccactgtg ccgctttggg caagttgctt aa
//