LOCUS AY680698 1192 bp mRNA linear HUM 10-AUG-2004 DEFINITION Homo sapiens hepatocyte nuclear factor 4 alpha, transcript variant 9 (HNF4A) mRNA, complete cds, alternatively spliced. ACCESSION AY680698 VERSION AY680698.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1192) AUTHORS Tanaka,T., Jiang,S., Hotta,H., Takano,K., Iwanari,H., Hirayama,Y., Midorikawa,Y., Hippo,Y., Watanabe,A., Yamashita,H., Kumakura,J., Uchiyama,Y., Hasegawa,G., Aburatani,H., Hamakubo,T., Naito,M., Sakai,J. and Kodama,T. TITLE Variation in P1 and P2 Promoter-Driven Hepatocyte Nuclear Factor-4a (HNF4a) Expression in Human Tissues: Implications for Carcinogenesis JOURNAL Unpublished REFERENCE 2 (bases 1 to 1192) AUTHORS Tanaka,T., Jiang,S., Hotta,H., Takano,K., Iwanari,H., Hirayama,Y., Midorikawa,Y., Hippo,Y., Watanabe,A., Yamashita,H., Kumakura,J., Uchiyama,Y., Hasegawa,G., Aburatani,H., Hamakubo,T., Naito,M., Sakai,J. and Kodama,T. TITLE Direct Submission JOURNAL Submitted (08-JUL-2004) Laboratory for Systems Biology and Medicine, Research Center for Advanced Science and Technology, University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8904, Japan FEATURES Location/Qualifiers source 1..1192 /db_xref="H-InvDB:HIT000257100" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="KatoIII" gene 1..1192 /gene="HNF4A" CDS 5..1192 /gene="HNF4A" /note="HNF4a9; alternatively spliced" /codon_start=1 /product="hepatocyte nuclear factor 4 alpha, transcript variant 9" /protein_id="AAT91239.1" /translation="MVSVNAPLGAPVESSYDTSPSEGTNLNAPNSLGVSALCAICGDR ATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAG MKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIA SIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFK DVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPD AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQ FIKLFGMAKIDNLLQEMLLGGPCQAQEGRGWSGDSPGDRPHTVSSPLSSLASPLCRFG QVA" BASE COUNT 251 a 355 c 364 g 222 t ORIGIN 1 ggccatggtc agcgtgaacg cgcccctcgg ggctccagtg gagagttctt acgacacgtc 61 cccatcagaa ggcaccaacc tcaacgcgcc caacagcctg ggtgtcagcg ccctgtgtgc 121 catctgcggg gaccgggcca cgggcaaaca ctacggtgcc tcgagctgtg acggctgcaa 181 gggcttcttc cggaggagcg tgcggaagaa ccacatgtac tcctgcagat ttagccggca 241 gtgcgtggtg gacaaagaca agaggaacca gtgccgctac tgcaggctca agaaatgctt 301 ccgggctggc atgaagaagg aagccgtcca gaatgagcgg gaccggatca gcactcgaag 361 gtcaagctat gaggacagca gcctgccctc catcaatgcg ctcctgcagg cggaggtcct 421 gtcccgacag atcacctccc ccgtctccgg gatcaacggc gacattcggg cgaagaagat 481 tgccagcatc gcagatgtgt gtgagtccat gaaggagcag ctgctggttc tcgttgagtg 541 ggccaagtac atcccagctt tctgcgagct ccccctggac gaccaggtgg ccctgctcag 601 agcccatgct ggcgagcacc tgctgctcgg agccaccaag agatccatgg tgttcaagga 661 cgtgctgctc ctaggcaatg actacattgt ccctcggcac tgcccggagc tggcggagat 721 gagccgggtg tccatacgca tccttgacga gctggtgctg cccttccagg agctgcagat 781 cgatgacaat gagtatgcct acctcaaagc catcatcttc tttgacccag atgccaaggg 841 gctgagcgat ccagggaaga tcaagcggct gcgttcccag gtgcaggtga gcttggagga 901 ctacatcaac gaccgccagt atgactcgcg tggccgcttt ggagagctgc tgctgctgct 961 gcccaccttg cagagcatca cctggcagat gatcgagcag atccagttca tcaagctctt 1021 cggcatggcc aagattgaca acctgttgca ggagatgctg ctgggaggtc cgtgccaagc 1081 ccaggagggg cggggttgga gtggggactc cccaggagac aggcctcaca cagtgagctc 1141 acccctcagc tccttggctt ccccactgtg ccgctttggg caagttgctt aa //