LOCUS AY673640 2613 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens cirhin interaction protein (CIRIP) mRNA, partial cds.
ACCESSION AY673640
VERSION AY673640.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2613)
AUTHORS Yu,B., Mitchell,G.A. and Richter,A.
TITLE Cirhin, the protein mutant in NAIC is a transcriptional co-factor
of HIVEP1 DNA binding protein
JOURNAL (in) ? (Ed.);
AMERICAN JOURNAL OF HUMAN GENETICS;
54th Annual Meeting of the American Society of Human Genetics
(2004)
REFERENCE 2 (bases 1 to 2613)
AUTHORS Yu,B., Mitchell,G.A. and Richter,A.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2004) Department of Medical Genetics,
Sainte-Justine Hospital, University of Montreal, 3175
Cote-Sainte-Catherine, Montreal, Quebec H3T 1C5, Canada
FEATURES Location/Qualifiers
source 1..2613
/db_xref="H-InvDB:HIT000257077"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="liver"
gene <1..2613
/gene="CIRIP"
CDS <1..2055
/gene="CIRIP"
/note="human immunodeficiency virus type I
enhancer-binding protein 1; major histocompatibility
complex binding protein 1; positive regulatory domain II
binding factor 1; zinc finger protein 40; HIVEP1; HIV-EP1;
PRDII-BF1; MBP-1"
/codon_start=1
/product="cirhin interaction protein"
/protein_id="AAV85766.1"
/translation="VVEFSNKDASEINSEQDKENSLIKSEPRRIKICDGGYKSNEEYV
YVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK
SKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFSYERSGYDLEESDGPDEDDNENEDDD
EDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDCFSGVHTDPMDVLPRA
LLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVDTSRSPCHQMSVDYPESE
EILRSSMAGKAVAITQSPSSVRLPPAAAEHSPQTAAGMPSVASPHPDPQEQKQQITLQ
PTPGLPSPHTHLFSHLPLHPQQQSRTPYNMVPVGGIHVVPAGLTYSTFVPLQAGPVQL
TIPAVSVVHRTLGTHRNTVTEVSGTTNPAGVAELSSVVPCIPIGQIRVPGLQNLSTPG
LQSLPSLSMETVNIVGLANTNMAPQVHPPGLALNAVGLQVLTANPSSQSSPAPQAHIP
GLQILNIALPTLIPSVSQVAVDAQGAPEMPASQSKACETQPKQTSVASANQVSRTESP
QGLPTVQRENAKKVLNPPAPAGDHARLDGLSKMDTEKAASANHVKPKPELTSIQGQPA
STSQPLLKAHSEVFTKPSGQQTLSPDRQVPRPTALPRRQPTVHFSDVSSDDDEDRLVI
AT"
variation 98
/gene="CIRIP"
/note="results in cysteine to phenylalanine substitution"
/replace="t"
variation 136
/gene="CIRIP"
/note="results in valine to isoleucine substitution"
/replace="a"
variation 343
/gene="CIRIP"
/note="results in valine to isoleucine substitution"
/replace="a"
variation 1060
/gene="CIRIP"
/note="results in proline to serine substitution"
/replace="t"
variation 1973
/gene="CIRIP"
/note="results in alanine to glycine substitution"
/replace="g"
BASE COUNT 781 a 622 c 558 g 652 t
ORIGIN
1 gtagttgaat tcagcaataa agatgcctct gaaattaaca gtgagcaaga taaagaaaat
61 tccttaatca aaagtgaacc aagaagaatt aaaatatgtg atggaggata taagtcaaat
121 gaagagtatg tatatgtccg aggcagggga agaggaaaat acatttgtga agaatgtgga
181 atacgttgta agaaacctag catgttaaag aaacacatac gaacccatac agatgtccgc
241 ccctaccact gcacttactg taacttctcc tttaagacta aaggaaatct gacaaaacac
301 atgaagtcca aggcacatag caagaaatgt gtggatttag gcgtctcagt aggtttaata
361 gatgaacagg atacagaaga atcagatgaa aaacagagat tcagttatga gcgatctgga
421 tatgatcttg aagaatctga tggcccagat gaggatgaca atgaaaatga agacgatgat
481 gaggacagcc aggctgaatc agtcctgtca gccacaccct cagtcacagc tagcccgcag
541 caccttccat ctagaagtag ccttcaggac cctgtgagta ctgacgagga tgtcaggatc
601 accgattgct tttctggggt acacacggac ccaatggacg ttctgcccag ggcgctgctc
661 accagaatga ctgtcctgag cacagcacag tctgactaca ataggaagac actctctccg
721 gggaaggcca ggcagcgtgc tgcgagagat gaaaacgaca caattccgtc tgtagacact
781 tccaggtccc cgtgtcatca gatgtctgtg gactaccctg agtcagaaga aattctgaga
841 agttctatgg caggaaaagc tgttgctata acacagagcc catcatctgt aagacttcct
901 cctgctgcag ctgagcacag cccccagaca gcagcgggga tgccttctgt ggcctcacca
961 catcctgacc ctcaagaaca gaagcagcaa ataactctac agccgactcc aggcttgcct
1021 tctccccaca ctcatttgtt tagccacctt cctttgcatc cccagcagca atcgaggaca
1081 ccttataata tggttccagt tggggggatc catgtggtac ctgctggcct cacatactcc
1141 acgtttgtgc cccttcaggc tggaccagtg cagctcacga tccctgctgt cagtgtcgtt
1201 cacagaactt tgggtactca taggaatacg gtcacagaag tgtctggcac tacaaaccct
1261 gctggagtgg ctgaattaag cagtgttgtg ccatgtattc ctatcggcca aatccgcgtg
1321 ccaggccttc agaacctaag taccccaggc ttgcagtcac tcccctcgtt aagcatggaa
1381 accgtcaata ttgtaggcct agccaataca aatatggccc cacaagtcca tccaccagga
1441 ctggctctga atgctgtcgg actgcaggtt ctgactgcaa acccttcatc acaaagcagc
1501 cccgcccctc aggcacacat tccaggtctc cagatcttga acatagcatt gcccacctta
1561 atcccctcag tcagtcaagt agccgttgat gcacagggag ctccagaaat gccagcttcc
1621 caaagcaaag catgcgagac acaacccaag cagacttctg tagccagcgc aaaccaggtc
1681 agcaggaccg agtctcctca ggggttacct acagtccagc gggaaaatgc aaaaaaagtt
1741 ctgaatccac ctgcccctgc aggtgaccat gcaaggcttg atggcctgag taaaatggac
1801 acagagaagg ctgcctcggc aaatcacgtg aagcccaagc ctgaactcac ttccatacag
1861 ggccaaccag cgtccacgtc acaacctctg ctgaaggcac attctgaagt ttttacaaag
1921 ccctcaggcc agcagactct ctctccagac agacaggttc ccaggcccac agcactaccg
1981 cggaggcagc ccactgtgca cttcagcgac gtgagcagcg atgatgacga ggacaggctt
2041 gtgatagcaa cctgatggat tttatttttt atttgctttt tttttatata acacttaaag
2101 gtttctttga aaaccctcct ttccttaaag cacatttttc tgacataaac tcatgactaa
2161 tctttgtgca atcatgaact tttgaccaat aattgttgtt ttgtgtcagc tccagccatt
2221 tttgtacatg ttgtatagac aattgtgcct tttaggagct ttatgtttag aaactgtaca
2281 gattgttgaa tatttatata cataaaaata tattatatat gtatatgaaa accaggtagt
2341 tatttgtgtt tagtaaggaa aacctgtcaa agtaaatcaa atgattaaat tatatgttcc
2401 actgttgaat ataaatttta tggctatggg gcagagtttc tgtgtataaa ttagtatgta
2461 aactccatat ttattgtatt catattagtc tttgaaaatg ggtctgtcct ccttgtgtaa
2521 gacagtaact ttacacttca gacagatttt ctgtgttatg aaatgtttca gtaaaatatt
2581 gtttacgact ttaaaaaaaa aaaaaaaaaa aaa
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