LOCUS AY653203 3473 bp mRNA linear HUM 31-JAN-2005
DEFINITION Homo sapiens truncated HERC6 mRNA, complete cds, alternatively
spliced.
ACCESSION AY653203
VERSION AY653203.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3473)
AUTHORS Hochrainer,K., Mayer,H., Baranyi,U., Binder,B., Lipp,J. and
Kroismayr,R.
TITLE The human HERC family of ubiquitin ligases: novel members, genomic
organization, expression profiling, and evolutionary aspects
JOURNAL Genomics 85 (2), 153-164 (2005)
PUBMED 15676274
REFERENCE 2 (bases 1 to 3473)
AUTHORS Kroismayr,R.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2004) Vascular Biology and Thrombosis Research,
Medical University Vienna, Brunnerstr.59, Vienna 1235, Austria
FEATURES Location/Qualifiers
source 1..3473
/db_xref="H-InvDB:HIT000255948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="4"
/map="4q22"
/cell_line="Jurkat"
CDS 184..1152
/note="alternatively spliced"
/codon_start=1
/product="truncated HERC6"
/protein_id="AAV66897.1"
/translation="MYFCWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRV
LSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAG
SEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL
GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR
NVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK
RGPQLVERIDGLVSQIDCGRLRGCSSQTHFCWNICQLCDNSSVKLE"
BASE COUNT 983 a 764 c 837 g 889 t
ORIGIN
1 agcacttgaa gttcaggcag cgagagttga catggggcca gggctgcgcc cctggggcgg
61 gttgaagaca gggtgagtct cttgatattc aggaaatcat cgcgcaccca gtcaccagcg
121 ttcgggagcc tgtcgcagcg ggaccgacgg aatccggagc aggcgacagg gcgcagaagc
181 gggatgtact tctgttgggg cgccgactcc agggagctgc agcgccggag gacggcgggc
241 agccccgggg ctgagctact gcaggcggcc agcggggagc gccactctct gctgctgctg
301 accaaccaca gggtcctctc gtgcggagac aacagcaggg gtcagctggg ccgcaggggc
361 gcgcagcgcg gggagctgcc agaaccaatt caggcattgg aaaccctaat tgttgatctc
421 gtgagctgcg ggaaggagca ctccctggct gtgtgccaca aaggaagggt cttcgcatgg
481 ggagctggtt ctgaagggca gctggggatt ggagaattca aggaaataag tttcacacct
541 aagaaaataa tgactctgaa tgatataaaa ataatacaag tttcctgtgg acactaccac
601 tccctggcat tatcaaaaga tagccaagtg ttttcgtggg gaaagaacag ccatgggcag
661 ctgggcttgg ggaaggagtt cccctcccaa gccagcccgc agagggtgag gtccctggag
721 gggatcccac tggctcaggt ggctgccgga ggggctcaca gctttgccct gtctctctgt
781 gggacttcgt ttggctgggg aagtaacagt gccgggcagc tggccctcag tgggcgtaat
841 gtcccagtgc aaagcaacaa gcctctctca gtcggtgcac tgaagaatct aggtgtggtt
901 tatatcagct gtggtgatgc acacactgcg gtgcttaccc aggacgggaa agtgttcaca
961 tttggagaca atcgctctgg acagctggga tacagcccca ctcctgagaa gagaggtcca
1021 caacttgtgg aaagaattga tggcctagtt tcgcagatag attgtggaag acttcgtgga
1081 tgttcaagtc aaacacattt ttgctggaac atatgccaac tttgtgacaa ctcatcagtg
1141 aaattagaat gatattttca tctcctgctt gtctgactgc aagtttttta aagaaaagag
1201 gaactggaga aacgacttcc attgatgtgg acttagaaat ggcaagagat accttcaaga
1261 agttaacaaa aaaggaatgg atttcttcca tgataactac gtgtctcgag gatgatctgc
1321 tcagagctct tccatgccat tctccacacc aagaagcttt atcagttttc ctcctgctcc
1381 cagaatgtcc tgtgatgcat gattctaaga actggaagaa cctggtggtt ccatttgcaa
1441 aggctgtgtg tgaaatgagt aaacaatctt tgcaagtcct agtaaacaaa gctaactgtc
1501 gactaccaga aaatactttc aacataaatg aactctccaa cttattaaac ttttatatag
1561 atagaggaag acagctcttt cgggataacc acctgatacc tgcagaaacc cccagtcctg
1621 ttattttcag tgattttcca tttatcttta attcgctatc caaaattaaa ttattgcaag
1681 ctgattcaca tataaagatg cagatgtcag aaaagaaagc atacatgctt atgcatgaaa
1741 caattctgca aaaaaaggat gaatttcctc catcacccag atttatactt agagtcagac
1801 gaagtcgcct ggttaaagat gctctgcgtc aattaagtca agctgaagct actgacttct
1861 gcaaagtatt agtggttgaa tttattaatg aaatttgtcc tgagtctgga ggggttagtt
1921 cagagttctt ccactgtatg tttgaagaga tgaccaagcc agaatatgga atgttcatgt
1981 atcctgaaat gggttcctgc atgtggtttc ctgccaagcc taaacctgag aagaaaagat
2041 atttcctctt tggaatgctg tgtggactct ccttattcaa tttaaatgtt gctaaccttc
2101 ctttcccact ggctctgtat aaaaaacttc tggaccaaaa gccatcattg gaagatttaa
2161 aagaactcag tcctcggttg gggaagagtt tgcaagaagt tctagatgat gctgctgatg
2221 acattggaga tgcgctctgc atacgctttt ctatacactg ggaccaaaat gatgttgact
2281 taattccaaa tgggatctcc atacctgtgg accaaaccaa caagagagac tatgtttcta
2341 agtatattga ttacattttc aacgtctctg taaaagcagt ttatgaggaa tttcagagag
2401 gattttatag agtctgtgag aaggagatac ttagacattt ctaccctgaa gaactaatga
2461 cagcaatcat tggaaatact gattatgact ggaaacagtt tgaacagaat tcaaagtatg
2521 agcaaggata ccaaaaatca catcctacta tacagttgtt ttggaaggct ttccacaaac
2581 taaccttgga tgaaaagaaa aaattcctct ttttccttac aggacgtgat aggctgcatg
2641 caagaggcat acagaaaatg gaaatagtat ttcgctgtcc tgaaactttc agtgaaagag
2701 atcacccaac atcaataact tgtcataata ttctctccct ccctaagtat tctacaatgg
2761 aaagaatgga ggaagcactt caagtagcca tcaacaacaa cagaggattt gtctcaccca
2821 tgctcacaca gtcataatca cctctgagag actcagggtg ggctttctca cacttggatc
2881 cttctgttct tccttacacc taaataatac aagagattaa tgaatagtgg ttagaagtag
2941 ttgagggaga gattggggga atggggagat gatgatgatg gtcaaagggt gcaaaatctc
3001 acacaagact gaggcaggag aatagggtac agagataggg atctaaggat gacttggaca
3061 cactccctgg cactgaagag tctgaacact ggcctgtgat tggtccattc caggaccttc
3121 atttgcataa ggtatcaaac cacatcagcc tctgattggc catgggccag acctgcactc
3181 tggccaatga ttggttcatt ccaggacatt catttgcata aggagtcaaa ccacaccagt
3241 cttggattgg ctgtgagcca attcacctca gtctctaatt ggctgtgagt cagtctttca
3301 tttacatagg gtgtaaccat caagaaacct ctacagggta cttaagcccc agaagatttt
3361 gctaccaggg ctcttgagcc acttgctcta gcccactccc accctgtgga atgtactttc
3421 acttttgctg cttcactgcc ttgtgctcca ataaatccac tccttcacca ccc
//