LOCUS AY653202 3692 bp mRNA linear HUM 31-JAN-2005
DEFINITION Homo sapiens truncated HERC6 mRNA, complete cds, alternatively
spliced.
ACCESSION AY653202
VERSION AY653202.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3692)
AUTHORS Hochrainer,K., Mayer,H., Baranyi,U., Binder,B., Lipp,J. and
Kroismayr,R.
TITLE The human HERC family of ubiquitin ligases: novel members, genomic
organization, expression profiling, and evolutionary aspects
JOURNAL Genomics 85 (2), 153-164 (2005)
PUBMED 15676274
REFERENCE 2 (bases 1 to 3692)
AUTHORS Kroismayr,R.
TITLE Direct Submission
JOURNAL Submitted (15-JUN-2004) Vascular Biology and Thrombosis Research,
Medical University Vienna, Brunnerstr.59, Vienna 1235, Austria
FEATURES Location/Qualifiers
source 1..3692
/db_xref="H-InvDB:HIT000255947"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="4"
/map="4q22"
/cell_line="Jurkat"
CDS 184..1278
/note="alternatively spliced"
/codon_start=1
/product="truncated HERC6"
/protein_id="AAV66896.1"
/translation="MYFCWGADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRV
LSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAG
SEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQL
GLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGR
NVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEK
RGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSDTSKPTHPEALTENFDI
SCLISAEDFVDVQVKHIFAGTYANFVTTHQ"
BASE COUNT 1035 a 830 c 885 g 942 t
ORIGIN
1 agcacttgaa gttcaggcag cgagagttga catggggcca gggctgcgcc cctggggcgg
61 gttgaagaca gggtgagtct cttgatattc aggaaatcat cgcgcaccca gtcaccagcg
121 ttcgggagcc tgtcgcagcg ggaccgacgg aatccggagc aggcgacagg gcgcagaagc
181 gggatgtact tctgttgggg cgccgactcc agggagctgc agcgccggag gacggcgggc
241 agccccgggg ctgagctact gcaggcggcc agcggggagc gccactctct gctgctgctg
301 accaaccaca gggtcctctc gtgcggagac aacagcaggg gtcagctggg ccgcaggggc
361 gcgcagcgcg gggagctgcc agaaccaatt caggcattgg aaaccctaat tgttgatctc
421 gtgagctgcg ggaaggagca ctccctggct gtgtgccaca aaggaagggt cttcgcatgg
481 ggagctggtt ctgaagggca gctggggatt ggagaattca aggaaataag tttcacacct
541 aagaaaataa tgactctgaa tgatataaaa ataatacaag tttcctgtgg acactaccac
601 tccctggcat tatcaaaaga tagccaagtg ttttcgtggg gaaagaacag ccatgggcag
661 ctgggcttgg ggaaggagtt cccctcccaa gccagcccgc agagggtgag gtccctggag
721 gggatcccac tggctcaggt ggctgccgga ggggctcaca gctttgccct gtctctctgt
781 gggacttcgt ttggctgggg aagtaacagt gccgggcagc tggccctcag tgggcgtaat
841 gtcccagtgc aaagcaacaa gcctctctca gtcggtgcac tgaagaatct aggtgtggtt
901 tatatcagct gtggtgatgc acacactgcg gtgcttaccc aggacgggaa agtgttcaca
961 tttggagaca atcgctctgg acagctggga tacagcccca ctcctgagaa gagaggtcca
1021 caacttgtgg aaagaattga tggcctagtt tcgcagatag attgtggaag ttatcacacc
1081 ctggcatatg tgcacaccac tggtcaggtg gtatcttttg gtcatggacc aagtgacaca
1141 agcaagccaa ctcatccgga ggccctgaca gagaactttg acattagctg cctgatttct
1201 gctgaagact tcgtggatgt tcaagtcaaa cacatttttg ctggaacata tgccaacttt
1261 gtgacaactc atcagtgaaa ttagaatgat attttcatct cctgcttgtc tgactgcaag
1321 ttttttaaag aaaagaggaa ctggagaaac gacttccatt gatgtggact tagaaatggc
1381 aagagatacc ttcaagaagt taacaaaaaa ggaatggatt tcttccatga taactacgtg
1441 tctcgaggat gatctgctca gagctcttcc atgccattct ccacaccaag aagctttatc
1501 agttttcctc ctgctcccag aatgtcctgt gatgcatgat tctaagaact ggaagaacct
1561 ggtggttcca tttgcaaagg ctgtgtgtga aatgagtaaa caatctttgc aagtcctagt
1621 aaacaaagct aactgtcgac taccagaaaa tactttcaac ataaatgaac tctccaactt
1681 attaaacttt tatatagata gaggaagaca gctctttcgg gataaccacc tgatacctgc
1741 agaaaccccc agtcctgtta ttttcagtga ttttccattt atctttaatt cgctatccaa
1801 aattaaatta ttgcaagctg attcacatat aaagatgcag gctggagtac aatggtgcaa
1861 tctcagctca ccacaacctc tgcctcccgg gttcaagcga ttcttctgcc tcagcctccc
1921 aaatgtcaga aaagaaagca tacatgctta tgcatgaaac aattctgcaa aaaaaggatg
1981 aatttcctcc atcacccaga tttatactta gagtcagacg aagtcgcctg gttaaagatg
2041 ctctgcgtca attaagtcaa gctgaagcta ctgacttctg caaagtatta gtggttgaat
2101 ttattaatga aatttgtcct gagtctggag gggttagttc agagttcttc cactgtatgt
2161 ttgaagagat gaccaagcca gaatatggaa tgttcatgta tcctgaaatg ggttcctgca
2221 tgtggtttcc tgccaagcct aaacctgaga agaaaagata tttcctcttt ggaatgctgt
2281 gtggactctc cttattcaat ttaaatgttg ctaaccttcc tttcccactg gctctgtata
2341 aaaaacttct ggaccaaaag ccatcattgg aagatttaaa agaactcagt cctcggttgg
2401 ggaagagttt gcaagaagtt ctagatgatg ctgctgatga cattggagat gcgctctgca
2461 tacgcttttc tatacactgg gaccaaaatg atgttgactt aattccaaat gggatctcca
2521 tacctgtgga ccaaaccaac aagagagact atgtttctaa gtatattgat tacattttca
2581 acgtctctgt aaaagcagtt tatgaggaat ttcagagagg attttataga gtctgtgaga
2641 aggagatact tagacatttc taccctgaag aactaatgac agcaatcatt ggaaatactg
2701 attatgactg gaaacagttt gaacagaatt caaagtatga gcaaggatac caaaaatcac
2761 atcctactat acagttgttt tggaaggctt tccacaaact aaccttggat gaaaagaaaa
2821 aattcctctt tttccttaca ggacgtgata ggctgcatgc aagaggcata cagaaaatgg
2881 aaatagtatt tcgctgtcct gaaactttca gtgaaagaga tcacccaaca tcaataactt
2941 gtcataatat tctctccctc cctaagtatt ctacaatgga aagaatggag gaagcacttc
3001 aagtagccat caacaacaac agaggatttg tctcacccat gctcacacag tcataatcac
3061 ctctgagaga ctcagggtgg gctttctcac acttggatcc ttctgttctt ccttacacct
3121 aaataataca agagattaat gaatagtggt tagaagtagt tgagggagag attgggggaa
3181 tggggagatg atgatgatgg tcaaagggtg caaaatctca cacaagactg aggcaggaga
3241 atagggtaca gagataggga tctaaggatg acttggacac actccctggc actgaagagt
3301 ctgaacactg gcctgtgatt ggtccattcc aggaccttca tttgcataag gtatcaaacc
3361 acatcagcct ctgattggcc atgggccaga cctgcactct ggccaatgat tggttcattc
3421 caggacattc atttgcataa ggagtcaaac cacaccagtc ttggattggc tgtgagccaa
3481 ttcacctcag tctctaattg gctgtgagtc agtctttcat ttacataggg tgtaaccatc
3541 aagaaacctc tacagggtac ttaagcccca gaagattttg ctaccagggc tcttgagcca
3601 cttgctctag cccactccca ccctgtggaa tgtactttca cttttgctgc ttcactgcct
3661 tgtgctccaa taaatccact ccttcaccac cc
//