LOCUS AY618868 4286 bp mRNA linear HUM 20-JUL-2006
DEFINITION Homo sapiens ubiquitin specific protease 42 (USP42) mRNA, complete
cds.
ACCESSION AY618868
VERSION AY618868.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4286)
AUTHORS Baek,K.-H. and Yoo,K.-J.
TITLE A discovery of a novel deubiquitinating enzyme human USP42
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4286)
AUTHORS Baek,K.-H. and Yoo,K.-J.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2004) Microbiology, Pochon CHA University/CHA
General Hospital, 605 Yeoksam 1-Dong, Kangnam-Gu, Seoul 135-081,
Korea
FEATURES Location/Qualifiers
source 1..4286
/db_xref="H-InvDB:HIT000386112"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="7"
/cell_line="HeLa"
gene 1..4286
/gene="USP42"
CDS 68..4042
/gene="USP42"
/codon_start=1
/product="ubiquitin specific protease 42"
/protein_id="AAT67238.1"
/translation="MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSL
NDVSNHTLSLGPVPGAVVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLK
WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQ
AHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSN
KLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQ
FVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKY
PEYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVS
TSDIRSVLSQQAYVLFYIRSHDVKNGGELTHPTHSPGQSSPRPVISQRVVTNKQAAPG
FIGPQLPSHMIKNPPHLNGTGPLKDTPSSSMSSPNGNSSVNRASPVNASASVQNWSVN
RSSVIPEHPKKQKITISIHNKLPVRQCQSQPNLHSNSLENPTKPVPSSTITNSAVQST
SNASTMSVSSKVTKPIPRSESCSQPVMNGKSKLNSSVLVPYGAESSEDSDEESKGLGK
ENGIGTIVSSHSPGQDAEDEEATPHELQEPMTLNGANSADSDSDPKENGLAPDGASCQ
GQPALHSENPFAKANGLPGKLMPAPLLSLPEDKILETFRLSNKLKGSTDEMSAPGAER
GPPEDRDAEPQPGSPAAESLEEPDAAAGLSSTKKAPPPRDPGTPATKEGAWEAMAVAP
EEPPPSAGEDIVGDTAPPDLCDPGSLTGDASPLSQDAKGMIAEGPRDSALAEAPEGLS
PAPPARSEEPCEQPLLVHPSGDHARDAQDPSQSLGAPEAAERPPAPVLDMAPAGHPEG
DAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVDRGHYRSRRERSSSGEPARESRSK
TEGHRHRRRRTCPRERDRQDRHAPEHHPGHGDRLSPGERRSLGRCSHHHSRHRSGVEL
DWVRHHYTEGERGWGREKFYPDRPRWDRCRYYHDRYALYAARDWKPFHGGREHERAGL
HERPHKDHNRGRRGCEPARERERHRPSSPRAGAPHALAPHPDRFSHDRTALVAGDNCN
LSDRFHEHENGKSRKRRHDSVENSDSHVEKKARRSEQKDPLEEPKAKKHKKSKKKKKS
KDKHRDRDSRHQRDSDLSAACSDADLHRHKKKKKKKKRHSRKSEDFVKDSELHLPRVT
SLETVAQFRRAQGGFPLSGGPPLEGVGPFREETKHLRMESRDDRCRLFEYGQGKRRYL
ELGR"
BASE COUNT 1103 a 1222 c 1139 g 822 t
ORIGIN
1 gtgtgcggcg gcggcggcgg cggccgaggg ggatggagcg agcgccgagc cgggtcagag
61 ttgaacaatg accatagttg acaaagcttc tgaatcttca gacccatcag cctatcagaa
121 tcagcctggc agctccgagg cagtctcacc tggagacatg gatgcaggtt ctgccagctg
181 gggtgctgtg tcttcattga atgatgtgtc aaatcacaca ctttctttag gaccagtacc
241 tggtgctgta gtttattcga gttcatctgt acctgataaa tcaaaaccat caccacaaaa
301 ggatcaagcc ctaggtgatg gcatcgctcc tccacagaaa gttcttttcc catctgagaa
361 gatttgtctt aagtggcaac aaactcatag agttggagct gggctccaga atttgggcaa
421 tacctgtttt gccaatgcag cactgcagtg tttaacctac acaccacctc ttgccaatta
481 catgctatca catgaacact ccaaaacatg tcatgcagaa ggcttttgta tgatgtgtac
541 aatgcaagca catattaccc aggcactcag taatcctggg gacgttatta aaccaatgtt
601 tgtcatcaat gagatgcggc gtatagctag gcacttccgt tttggaaacc aagaagatgc
661 ccatgaattc cttcaataca ctgttgatgc tatgcagaaa gcatgcttga atggcagcaa
721 taaattagac agacacaccc aggccaccac tcttgtttgt cagatatttg gaggatacct
781 aagatctaga gtcaaatgtt taaattgcaa gggcgtttca gatacttttg atccatatct
841 tgatataaca ttggagataa aggctgctca gagtgtcaac aaggcattgg agcagtttgt
901 gaagccggaa cagcttgatg gagaaaactc gtacaagtgc agcaagtgta aaaagatggt
961 tccagcttca aagaggttca ctatccatag atcctctaat gttcttacac tttctctgaa
1021 acgttttgca aattttaccg gtggaaaaat tgctaaggat gtgaaatacc ctgagtatct
1081 tgatattcgg ccatatatgt ctcaacccaa cggagagcca attgtctacg tcttgtatgc
1141 agtgctggtc cacactggtt ttaattgcca tgctggccat tacttctgct acataaaagc
1201 tagcaatggc ctctggtatc aaatgaatga ctccattgta tctaccagtg atattagatc
1261 ggtactcagc caacaagcct atgtgctctt ttatatcagg tcccatgatg tgaaaaatgg
1321 aggtgaactt actcatccca cccatagccc cggccagtcc tctccccgcc ccgtcatcag
1381 tcagcgggtt gtcaccaaca aacaggctgc gccaggcttt atcggaccac agcttccctc
1441 tcacatgata aagaatccac ctcacttaaa tgggactgga ccattgaaag acacgccaag
1501 cagttccatg tcgagtccta acgggaattc cagtgtcaac agggctagtc ctgttaatgc
1561 ttcagcttct gtccaaaact ggtcagttaa taggtcctca gtgatcccag aacatcctaa
1621 gaaacaaaaa attacaatca gtattcacaa caagttgcct gttcgccagt gtcagtctca
1681 acctaacctt catagtaatt ctttggagaa ccctaccaag cccgttccct cttctaccat
1741 taccaattct gcagtacagt ctacctcgaa cgcatctacg atgtcagttt ctagtaaagt
1801 aacaaaaccg atcccccgca gtgaatcctg ctcccagccc gtgatgaatg gcaaatccaa
1861 gctgaactcc agcgtgctgg tgccctatgg cgccgagtcc tctgaggact ctgacgagga
1921 gtcaaagggg ctgggcaagg agaatgggat tggtacgatt gtgagctccc actctcccgg
1981 ccaagatgcc gaagatgagg aggccactcc gcacgagctt caagaaccca tgaccctaaa
2041 cggtgctaat agtgcagaca gcgacagtga cccgaaagaa aacggcctag cgcctgatgg
2101 tgccagctgc caaggccagc ctgccctgca ctcagaaaat ccctttgcta aggcaaacgg
2161 tcttcctgga aagttgatgc ctgctccttt gctgtctctc ccagaagaca aaatcttaga
2221 gaccttcagg cttagcaaca aactgaaagg ctcgacggat gaaatgagtg cacctggagc
2281 agagaggggc cctcccgagg accgcgacgc cgagcctcag cctggcagcc ccgccgccga
2341 atccctggag gagccagatg cggccgccgg cctcagcagc accaagaagg ctccgccgcc
2401 ccgcgatccc ggcacccccg ctaccaaaga aggcgcctgg gaggccatgg ccgtcgcccc
2461 cgaggagcct ccgcccagcg ccggcgagga catcgtgggg gacacagcac cccctgacct
2521 gtgtgatccc gggagcttaa caggcgatgc gagcccgttg tcccaggacg caaaggggat
2581 gatcgcggag ggcccgcggg actcggcgtt ggcggaagcc ccggaagggt tgagtccggc
2641 tccgcctgcg cggtcggagg agccctgcga gcagccactc cttgttcacc ccagcgggga
2701 ccacgcccgg gacgctcagg acccatccca gagcttgggc gcacccgagg ccgcagagcg
2761 gccgccagct cctgtgctgg acatggcccc ggccggtcac ccggaagggg acgctgagcc
2821 tagccccggc gagagggtcg aggacgccgc ggcgccgaaa gccccaggcc cttccccagc
2881 gaaggagaaa atcggcagcc tcagaaaggt ggaccgaggc cactaccgca gccggagaga
2941 gcgctcgtcc agcggggagc ccgccagaga gagcaggagc aagactgagg gccaccgtca
3001 ccggcggcgc cgcacctgcc cccgggagcg cgaccgccag gaccgccacg ccccggagca
3061 ccaccccggc cacggcgaca ggctcagccc tggcgagcgc cgctctctgg gcaggtgcag
3121 tcaccaccac tcccgacacc ggagcggggt ggagctggac tgggtcagac accactacac
3181 cgagggcgag cgtggctggg gccgggagaa gttctacccc gacaggccgc gctgggacag
3241 gtgccggtac taccatgaca ggtacgccct gtacgctgcc cgggactgga agcccttcca
3301 cggcggccgc gagcacgagc gggccgggct gcacgagcgg ccgcacaagg accacaaccg
3361 gggccgtagg ggctgcgagc cggcccggga gagggagcgg caccgcccca gcagcccccg
3421 cgcaggcgcg ccccacgccc tcgccccgca ccccgaccgc ttctcccacg acagaactgc
3481 acttgtagcc ggagacaact gtaacctctc tgatcggttt cacgaacacg aaaatggaaa
3541 gtcccggaaa cggagacacg acagtgtgga gaacagtgac agtcatgttg aaaagaaagc
3601 ccggaggagc gaacagaagg atcctctaga agagcctaaa gcaaagaagc acaaaaaatc
3661 aaagaagaaa aagaaatcca aagacaaaca ccgagaccgc gactccaggc atcagcggga
3721 ctcagacctc tcagcagcgt gctctgacgc tgacctccac agacacaaaa aaaagaagaa
3781 gaaaaagaag agacattcaa gaaaatcaga ggactttgtt aaagattcag aactgcactt
3841 gcccagggtc accagcttgg agactgtcgc ccagttccgg agagcccagg gtggctttcc
3901 tctctctggt ggcccgcctc tggaaggcgt cggacctttc cgtgaggaaa cgaaacactt
3961 acggatggaa agcagggatg acaggtgtcg tctctttgag tatggccagg gtaagaggag
4021 atacttggaa ttaggaagat agaaactatt tcttaataca ttttctttgc aaaggtgatt
4081 aacatgtaga aagaaaacct caggtggcat caaagggcac agttactcag agcacccctg
4141 ccctgcctgg tctggcctca gtgctcatcc ctgcagtgtg gttccgttgc acagttaagc
4201 ccttagcgtt tattgaaggc ctaagtgaca caggactgag ggcagcacta cctgtgtcac
4261 caaagccctg gaacgtacag ctctag
//