LOCUS AY581149 7179 bp mRNA linear HUM 14-OCT-2008
DEFINITION Homo sapiens colon cancer secreted protein 1 (CCSP1) mRNA, complete
cds, alternative transcript.
ACCESSION AY581149
VERSION AY581149.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7179)
AUTHORS Fink,S.P., Platzer,P., Xin,B., Mikkola,D., Nosrati,A.,
Willson,J.K.V., Wilson,K. and Markowitz,S.
TITLE Colon Cancer Secreted Protein-1 (CCSP-1), a Novel Candidate
Serological Marker of Colon Neoplasia
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7179)
AUTHORS Fink,S.P., Platzer,P., Xin,B., Mikkola,D., Nosrati,A.,
Willson,J.K.V., Wilson,K. and Markowitz,S.
TITLE Direct Submission
JOURNAL Submitted (23-MAR-2004) Medicine, Case Western Reserve
University/HHMI, 11001 Cedar Ave, Cleveland, OH 44106, USA
FEATURES Location/Qualifiers
source 1..7179
/db_xref="H-InvDB:HIT000331965"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="15"
/map="15q24"
gene 1..7179
/gene="CCSP1"
/note="short transcript"
CDS 360..4445
/gene="CCSP1"
/codon_start=1
/product="colon cancer secreted protein 1"
/protein_id="AAU06220.1"
/translation="MGAAGRQDFLFKAMLTISWLTLTCFPGATSTVAAGCPDQSPELQ
PWNPGHDQDHHVHIGQGKTLLLTSSATVYSIHISEGGKLVIKDHDEPIVLRTRHILID
NGGELHAGSALCPFQGNFTIILYGRADEGIQPDPYYGLKYIGVGKGGALELHGQKKLS
WTFLNKTLHPGGMAEGGYFFERSWGHRGVIVHVIDPKSGTVIHSDRFDTYRSKKESER
LVQYLNAVPDGRILSVAVNDEGSRNLDDMARKAMTKLGSKHFLHLGFRHPWSFLTVKG
NPSSSVEDHIEYHGHRGSAAARVFKLFQTEHGEYFNVSLSSEWVQDVEWTEWFDHDKV
SQTKGGEKISDLWKAHPGKICNRPIDIQATTMDGVNLSTEVVYKKGQDYRFACYDRGR
ACRSYRVRFLCGKPVRPKLTVTIDTNVNSTILNLEDNVQSWKPGDTLVIASTDYSMYQ
AEEFQVLPCRSCAPNQVKVAGKPMYLHIGEEIDGVDMRAEVGLLSRNIIVMGEMEDKC
YPYRNHICNFFDFDTFGGHIKFALGFKAAHLEGTELKHMGQQLVGQYPIHFHLAGDVD
ERGGYDPPTYIRDLSIHHTFSRCVTVHGSNGLLIKDVVGYNSLGHCFFTEDGPEERNT
FDHCLGLLVKSGTLLPSDRDSKMCKMITEDSYPGYIPKPRQDCNAVSTFWMANPNNNL
INCAAAGSEETGFWFIFHHVPTGPSVGMYSPGYSEHIPLGKFYNNRAHSNYRAGMIID
NGVKTTEASAKDKRPFLSIISARYSPHQDADPLKPREPAIIRHFIAYKNQDHGAWLRG
GDVWLDSCRFADNGIGLTLASGGTFPYDDGSKQEIKNSLFVGESGNVGTEMMDNRIWG
PGGLDHSGRTLPIGQNFPIRGIQLYDGPINIQNCTFRKFVALEGRHTSALAFRLNNAW
QSCPHNNVTGIAFEDVPITSRVFFGEPGPWFNQLDMDGDKTSVFHDVDGSVSEYPGSY
LTKNDNWLVRHPDCINVPDWRGAICSGCYAQMYIQAYKTSNLRMKIIKNDFPSHPLYL
EGALTRSTHYQQYQPVVTLQKGYTIHWDQTAPAELAIWLINFNKGDWIRVGLCYPRGT
TFSILSDVHNRLLKQTSKTGVFVRTLQMDKVEQSYPGRSHYYWDEDSGLLFLKLKAQN
EREKFAFCSMKGCERIKIKALIPKNAGVSDCTATAYPKFTERAVVDVPMPKKLFGSQL
KTKDHFLEVKMESSKQHFFHLWNDFAYIEVDGKKYPSSEDGIQVVVIDGNQGRVVSHT
SFRNSILQGIPWQLFNYVATIPDNSIVLMASKGRYVSRGPWTRVLEKLGADRGLKLKE
QMAFVGFKGSFRPIWVTLDTEDHKAKIFQVVPIPVVKKKKL"
BASE COUNT 1729 a 1888 c 1938 g 1624 t
ORIGIN
1 gagctagcgc tcaagcagag cccagcgcgg tgctatcgga cagagcctgg cgagcgcaag
61 cggcgcgggg agccagcggg gctgagcgcg gccagggtct gaacccagat ttcccagact
121 agctaccact ccgcttgccc acgccccggg agctcgcggc gcctggcggt cagcgaccag
181 acgtccgggg ccgctgcgct cctggcccgc gaggcgtgac actgtctcgg ctacagaccc
241 agagagaaaa gcttcattct ggaggggaag gagttttgag tgccaaggat gaaattccac
301 ccatcactcg gtctctgagc tgcaggacac aggcaggaca acgggagcac actgccagga
361 tgggagctgc tgggaggcag gacttcctct tcaaggccat gctgaccatc agctggctca
421 ctctgacctg cttccctggg gccacatcca cagtggctgc tgggtgccct gaccagagcc
481 ctgagttgca accctggaac cctggccatg accaagacca ccatgtgcat atcggccagg
541 gcaagacact gctgctcacc tcttctgcca cggtctattc catccacatc tcagagggag
601 gcaagctggt cattaaagac cacgacgagc cgattgtttt gcgaacccgg cacatcctga
661 ttgacaacgg aggagagctg catgctggga gtgccctctg ccctttccag ggcaatttca
721 ccatcatttt gtatggaagg gctgatgaag gtattcagcc ggatccttac tatggtctga
781 agtacattgg ggttggtaaa ggaggcgctc ttgagttgca tggacagaaa aagctctcct
841 ggacatttct gaacaagacc cttcacccag gtggcatggc agaaggaggc tatttttttg
901 aaaggagctg gggccaccgt ggagttattg ttcatgtcat cgaccccaaa tcaggcacag
961 tcatccattc tgaccggttt gacacctata gatccaagaa agagagtgaa cgtctggtcc
1021 agtatttgaa cgcggtgccc gatggcagga tcctttctgt tgcagtgaat gatgaaggtt
1081 ctcgaaatct ggatgacatg gccaggaagg cgatgaccaa attgggaagc aaacacttcc
1141 tgcaccttgg atttagacac ccttggagtt ttctaactgt gaaaggaaat ccatcatctt
1201 cagtggaaga ccatattgaa tatcatggac atcgaggctc tgctgctgcc cgggtattca
1261 aattgttcca gacagagcat ggcgaatatt tcaatgtttc tttgtccagt gagtgggttc
1321 aagacgtgga gtggacggag tggttcgatc atgataaagt atctcagact aaaggtgggg
1381 agaaaatttc agacctctgg aaagctcacc caggaaaaat atgcaatcgt cccattgata
1441 tacaggccac tacaatggat ggagttaacc tcagcaccga ggttgtctac aaaaaaggcc
1501 aggattatag gtttgcttgc tacgaccggg gcagagcctg ccggagctac cgtgtacggt
1561 tcctctgtgg gaagcctgtg aggcccaaac tcacagtcac cattgacacc aatgtgaaca
1621 gcaccattct gaacttggag gataatgtac agtcatggaa acctggagat accctggtca
1681 ttgccagtac tgattactcc atgtaccagg cagaagagtt ccaggtgctt ccctgcagat
1741 cctgcgcccc caaccaggtc aaagtggcag ggaaaccaat gtacctgcac atcggggagg
1801 agatagacgg cgtggacatg cgggcggagg ttgggcttct gagccggaac atcatagtga
1861 tgggggagat ggaggacaaa tgctacccct acagaaacca catctgcaat ttctttgact
1921 tcgatacctt tgggggccac atcaagtttg ctctgggatt taaggcagca cacttggagg
1981 gcacggagct gaagcatatg ggacagcagc tggtgggtca gtacccgatt cacttccacc
2041 tggccggtga tgtagacgaa aggggaggtt atgacccacc cacatacatc agggacctct
2101 ccatccatca tacattctct cgctgcgtca cagtccatgg ctccaatggc ttgttgatca
2161 aggacgttgt gggctataac tctttgggcc actgcttctt cacggaagat gggccggagg
2221 aacgcaacac ttttgaccac tgtcttggcc tccttgtcaa gtctggaacc ctcctcccct
2281 cggaccgtga cagcaagatg tgcaagatga tcacagagga ctcctaccca gggtacatcc
2341 ccaagcccag gcaagactgc aatgctgtgt ccaccttctg gatggccaat cccaacaaca
2401 acctcatcaa ctgtgccgct gcaggatctg aggaaactgg attttggttt atttttcacc
2461 acgtaccaac gggcccctcc gtgggaatgt actccccagg ttattcagag cacattccac
2521 tgggaaaatt ctataacaac cgagcacatt ccaactaccg ggctggcatg atcatagaca
2581 acggagtcaa aaccaccgag gcctctgcca aggacaagcg gccgttcctc tcaatcatct
2641 ctgccagata cagccctcac caggacgccg acccgctgaa gccccgggag ccggccatca
2701 tcagacactt cattgcctac aagaaccagg accacggggc ctggctgcgc ggcggggatg
2761 tgtggctgga cagctgccgg tttgctgaca atggcattgg cctgaccctg gccagtggtg
2821 gaaccttccc gtatgacgac ggctccaagc aagagataaa gaacagcttg tttgttggcg
2881 agagtggcaa cgtggggacg gaaatgatgg acaataggat ctggggccct ggcggcttgg
2941 accatagcgg aaggaccctc cctataggcc agaattttcc aattagagga attcagttat
3001 atgatggccc catcaacatc caaaactgca ctttccgaaa gtttgtggcc ctggagggcc
3061 ggcacaccag cgccctggcc ttccgcctga ataatgcctg gcagagctgc ccccataaca
3121 acgtgaccgg cattgccttt gaggacgttc cgattacttc cagagtgttc ttcggagagc
3181 ctgggccctg gttcaaccag ctggacatgg atggggataa gacatctgtg ttccatgacg
3241 tcgacggctc cgtgtccgag taccctggct cctacctcac gaagaatgac aactggctgg
3301 tccggcaccc agactgcatc aatgttcccg actggagagg ggccatttgc agtgggtgct
3361 atgcacagat gtacattcaa gcctacaaga ccagtaacct gcgaatgaag atcatcaaga
3421 atgacttccc cagccaccct ctttacctgg agggggcgct caccaggagc acccattacc
3481 agcaatacca accggttgtc accctgcaga agggctacac catccactgg gaccagacgg
3541 cccccgccga actcgccatc tggctcatca acttcaacaa gggcgactgg atccgagtgg
3601 ggctctgcta cccgcgaggc accacattct ccatcctctc ggatgttcac aatcgcctgc
3661 tgaagcaaac gtccaagacg ggcgtcttcg tgaggacctt gcagatggac aaagtggagc
3721 agagctaccc tggcaggagc cactactact gggacgagga ctcagggctg ttgttcctga
3781 agctgaaagc tcagaacgag agagagaagt ttgctttctg ctccatgaaa ggctgtgaga
3841 ggataaagat taaagctctg attccaaaga acgcaggcgt cagtgactgc acagccacag
3901 cttaccccaa gttcaccgag agggctgtcg tagacgtgcc gatgcccaag aagctctttg
3961 gttctcagct gaaaacaaag gaccatttct tggaggtgaa gatggagagt tccaagcagc
4021 acttcttcca cctctggaac gacttcgctt acattgaagt ggatgggaag aagtacccca
4081 gttcggagga tggcatccag gtggtggtga ttgacgggaa ccaagggcgc gtggtgagcc
4141 acacgagctt caggaactcc attctgcaag gcataccatg gcagcttttc aactatgtgg
4201 cgaccatccc tgacaattcc atagtgctta tggcatcaaa gggaagatac gtctccagag
4261 gcccatggac cagagtgctg gaaaagcttg gggcagacag gggtctcaag ttgaaagagc
4321 aaatggcatt cgttggcttc aaaggcagct tccggcccat ctgggtgaca ctggacactg
4381 aggatcacaa agccaaaatc ttccaagttg tgcccatccc tgtggtgaag aagaagaagt
4441 tgtgaggaca gctgccgccc ggtgccacct cgtggtagac tatgacggtg actcttggca
4501 gcagaccagt gggggatggc tgggtccccc agcccctgcc agcagctgcc tgggaaggcc
4561 gtgtttcagc cctgatgggc caagggaagg ctatcagaga ccctggtgct gccacctgcc
4621 cctactcaag tgtctacctg gagcccctgg ggcggtgctg gccaatgctg gaaacattca
4681 ctttcctgca gcctcttggg tgcttctctc ctatctgtgc ctcttcagtg ggggtttggg
4741 gaccatatca ggagacctgg gttgtgctga cagcaaagat ccactttggc aggagccctg
4801 acccagctag gaggtagtct ggagggctgg tcattcacag atccccatgg tcttcagcag
4861 acaagtgagg gtggtaaatg taggagaaag agccttggcc ttaaggaaat ctttactcct
4921 gtaagcaaga gccaacctca caggattagg agctggggta gaactggcta tccttgggga
4981 agaggcaagc cctgcctctg gccgtgtcca cctttcagga gactttgagt ggcaggtttg
5041 gacttggact agatgactct caaaggccct tttagttctg agattccaga aatctgctgc
5101 atttcacatg gtacctggaa cccaacagtt catggatatc cactgatatc catgatgctg
5161 ggtgccccag cgcacacggg atggagaggt gagaactaat gcctagcttg aggggtctgc
5221 agtccagtag ggcaggcagt caggtccatg tgcactgcaa tgccaggtgg agaaatcaca
5281 gagaggtaaa atggaggcca gtgccatttc agaggggagg ctcaggaagg cttcttgctt
5341 acaggaatga aggctggggg cattttgctg gggggagatg aggcagcctc tggaatggct
5401 cagggattca gccctccctg ccgctgcctg ctgaagctgg tgactacggg gtcgcccttt
5461 gctcacgtct ctctggccca ctcatgatgg agaagtgtgg tcagagggga gcaatgggct
5521 ttgctgctta tgagcacaga ggaattcagt ccccaggcag ccctgcctct gactccaaga
5581 gggtgaagtc cacagaagtg agctcctgcc ttagggcctc atttgctctt catccaggga
5641 actgagcaca gggggcctcc aggagaccct agatgtgctc gtactccctc ggcctgggat
5701 ttcagagctg gaaatataga aaatatctag cccaaagcct tcattttaac agatggggaa
5761 agtgagcccc caagatggga aagaaccaca cagctaaggg agggcctggg gagccccacc
5821 ctagcccttg ctgccacacc acattgcctc aacaaccggc cccagagtgc ccaggcactc
5881 ctgaggtagc ttctggaaat ggggacaagt cccctcgaag gaaaggaaat gactagagta
5941 gaatgacagc tagcagatct cttccctcct gctcccagcg cacacaaacc cgccctcccc
6001 ttggtgttgg cggtccctgt ggccttcact ttgttcacta cctgtcagcc cagcctgggt
6061 gcacagtagc tgcaactccc cattggtgct acctggctct cctgtctctg cagctctaca
6121 ggtgaggccc agcagaggga gtagggctcg ccatgtttct ggtgagccaa tttggctgat
6181 cttgggtgtc tgaacagcta ttgggtccac cccagtccct ttcagctgct gcttaatgcc
6241 ctgctctctc cctggcccac cttatagaga gcccaaagag ctcctgtaag agggagaact
6301 ctatctgtgg tttataatct tgcacgaggc accagagtct ccctgggtct tgtgatgaac
6361 tacatttatc ccctttcctg ccccaaccac aaactctttc cttcaaagag ggcctgcctg
6421 gctccctcca cccaactgca cccatgagac tcggtccaag agtccattcc ccaggtggga
6481 gccaactgtc agggaggtct ttcccaccaa acatctttca gctgctggga ggtgaccata
6541 gggctctgct tttaaagata tggctgcttc aaaggccaga gtcacaggaa ggacttcttc
6601 cagggagatt agtggtgatg gagaggagag ttaaaatgac ctcatgtcct tcttgtccac
6661 ggttttgttg agttttcact cttctaatgc aagggtctca cactgtgaac cacttaggat
6721 gtgatcactt tcaggtggcc aggaatgttg aatgtctttg gctcagttca tttaaaaaag
6781 atatctattt gaaagttctc agagttgtac atatgtttca cagtacagga tctgtacata
6841 aaagtttctt tcctaaacca ttcaccaaga gccaatatct aggcattttc ttggtagcac
6901 aaattttctt attgcttaga aaattgtcct ccttgttatt tctgtttgta agacttaagt
6961 gagttaggtc tttaaggaaa gcaacgctcc tctgaaatgc ttgtcttttt tctgttgccg
7021 aaatagctgg tcctttttcg ggagttagat gtatagagtg tttgtatgta aacatttctt
7081 gtaggcatca ccatgaacaa agatatattt tctatttatt tattatatgt gcacttcaag
7141 aagtcactgt cagagaaata aagaattgtc ttaaatgtc
//