LOCUS AY576779 6082 bp mRNA linear HUM 09-MAR-2005 DEFINITION Homo sapiens nucleolar protein with MIF4G domain 1 (NOM1) mRNA, complete cds. ACCESSION AY576779 VERSION AY576779.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6082) AUTHORS Simmons,H.M., Ruis,B.L., Kapoor,M., Hudacek,A.W. and Conklin,K.F. TITLE Identification of NOM1, a nucleolar, eIF4A binding protein encoded within the chromosome 7q36 breakpoint region targeted in cases of pediatric acute myeloid leukemia JOURNAL Gene 347 (1), 137-145 (2005) PUBMED 15715967 REFERENCE 2 (bases 1 to 6082) AUTHORS Conklin,K.F., Simmons,H., Hirsch,B., Ruis,B.L. and Hudacek,A. TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) GCD, University of Minnesota, 515 Delaware St. SE, Minneapolis, MN 55455, USA FEATURES Location/Qualifiers source 1..6082 /db_xref="H-InvDB:HIT000331958" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="7" /map="7q36.3" /note="within common breakpoint region in cases of pediatric leukemia with 7q36;12p13 rearrangements" gene 1..6082 /gene="NOM1" 5'UTR 1..15 /gene="NOM1" CDS 16..2598 /gene="NOM1" /note="contains MIF4G and MA3 domains" /codon_start=1 /product="nucleolar protein with MIF4G domain 1" /protein_id="AAT39521.1" /translation="MAASRSAGEAGPGGSQGRVVRMKRRGGRGPRRGPAGGGEKALKR LKLAVEEFVHATSEGEAPGGCEGRGAPVSFRPGGRKSRKELRKEKRHLRKARRLQRTA GPEQGPGLGGRSGAEEASGHRQDTEERARPAPSRDPSPPRKPRPSRVKAKATAATAKT RPSAAATAAARKRALLAANEEEDREIRKLERCLGLNKRKKKDGSSSVPLSFARDGLDY ILGALESGKNSGLYDSSGEEEEDAGQTLPESDLESDSQDESEEEEEGDVEKEKKAQEA EAQSEDDDEDTEEEQGEEKEKGAQEKRRGKRVRFAEDEEKSENSSEDGDITDKSLCGS GEKYIPPHVRQAEETVDFKKKEELERLKKHVKGLLNRLSEPNMASISGQLEELYMAHS RKDMNDTLTSALMGACVTASAMPSRLMMEHVLLVSILHHTVGIEVGAHFLEAVVRKFD AIYKYGSEGKECDNLFTVIAHLYNFHVVQSLLIFDILKKLIGTFTEKDIELILLMLKN VGFSLRKDDALSLKELITEAQTKASGAGSEFQDQTRIRFMLETMLALKNNDMRKIPGY DPEPVEKLRKLQRALVRNAGSGSETQLRVSWDSVLSAEQTGRWWIVGSAWSGAPMIDN SHHTHLQKQLVGTVSSKILELARKQRMNTDIRRNIFCTIMTSEDFLDAFEKLLKLGLK DQQEREIIHVLMDCCLQEKTYNPFYAFLASKFCEYERRFQMTFQFSIWDKFRDLENLP ATNFSNLVHLVAHLLKTKSLSLSILKVVEFSELDKPRVRFLRKVLSILLMETEVEDLS LIFTRVSDNPKLGVLREGLKLFISHFLLKNAQAHRSADEANVLREKADLATKCLQGKA SLRM" misc_feature 1105..1692 /gene="NOM1" /note="Region: MIF4G domain" misc_feature 1978..2232 /gene="NOM1" /note="Region: MA3 domain" 3'UTR 2599..6082 /gene="NOM1" repeat_region order(2901..3201,3310..3600) /gene="NOM1" /rpt_type=direct regulatory 6047..6053 /regulatory_class="polyA_signal_sequence" /gene="NOM1" BASE COUNT 1727 a 1292 c 1586 g 1477 t ORIGIN 1 cacgcgtttc gaaagatggc ggcgtccagg agcgcgggag aggccggccc gggcggctcc 61 cagggacgcg tggtccgcat gaagcgcaga ggcgggcgcg ggccgcgccg cggtcctgct 121 ggcggtgggg agaaggccct gaagaggctg aagctagcgg tggaggagtt cgtgcacgcg 181 acttcggaag gcgaggctcc cgggggttgc gaggggcgcg gcgccccggt gagctttcgc 241 ccgggaggga gaaaaagccg taaggaactg aggaaggaga agcggcacct gcggaaagca 301 cgccggctgc agaggacggc gggccccgaa cagggtcccg gcctgggagg ccgaagcgga 361 gccgaagaag ccagcggtca ccggcaggac acggaggagc gcgcccgccc agcccctagt 421 cgggacccct cgcctcccag gaagccgcgg ccgtcccggg tcaaggccaa ggccacggcc 481 gccaccgcaa agaccagacc ctccgcagcc gccaccgccg ctgcccggaa acgggcgctt 541 ttagcggcga acgaggagga ggaccgagag atccgaaagc tggagcgttg cctcggtttg 601 aacaagcgca aaaagaagga cggcagcagc tccgtgccgc tgagctttgc acgcgacggt 661 cttgactata ttctgggagc cctggagtct gggaaaaata gcggcttgta cgacagcagt 721 ggtgaggagg aggaagatgc cggacagaca ctccccgaaa gtgacttaga gagtgactcc 781 caggacgaaa gtgaggagga ggaggaggga gacgtagaaa aggaaaagaa ggcgcaggaa 841 gcagaagcgc agagcgagga cgacgacgag gatacagaag aggaacaggg ggaagaaaag 901 gaaaagggag cgcaggagaa aaggaggggg aagagagtcc gttttgcaga agatgaagaa 961 aagagtgaaa attcctcgga ggacggtgac ataacggata agagtctttg tggaagtggt 1021 gaaaagtaca tcccacctca tgtgaggcaa gctgaggaga cagtggactt caagaaaaag 1081 gaagaactag aaaggctgaa gaaacatgta aaaggtctac ttaacaggtt gagtgaaccc 1141 aacatggctt ccatcagtgg gcagctggag gaactgtaca tggcccacag cagaaaggac 1201 atgaatgaca ccctgacctc cgctctcatg ggtgcctgcg tcactgcctc ggccatgccc 1261 agcagactga tgatggagca tgttctctta gtcagcatcc ttcaccacac agttggaatc 1321 gaggtcggtg cccactttct ggaggcagtg gtgaggaagt tcgatgccat ctataaatac 1381 ggaagcgaag ggaaagagtg tgacaacctg ttcaccgtca ttgcccattt atacaacttc 1441 cacgtggtac agtctctcct catcttcgac attttgaaaa aactgattgg aactttcacc 1501 gaaaaagata ttgaactgat cttgttaatg ctgaaaaacg tgggtttttc attgaggaaa 1561 gatgatgctt tatcacttaa ggaattgatc actgaagccc agaccaaagc cagcggggca 1621 ggcagcgagt ttcaggacca gaccaggatt cggtttatgc tagagacgat gttggccctg 1681 aagaacaatg acatgcgcaa aattccaggc tatgaccccg agcccgtgga gaagctgagg 1741 aaactgcaga gagctttggt ccgcaacgcc ggctcaggtt ctgagacgca gcttcgcgtc 1801 tcctgggaca gtgtcttgag tgcggagcag acgggtcgct ggtggattgt ggggtccgcc 1861 tggagtgggg ccccgatgat cgacaacagt caccatacgc acctgcagaa gcagcttgtg 1921 gggacggtca gttcaaagat cctagaactc gcccggaagc agaggatgaa cacagacatc 1981 cggagaaaca tattctgcac aataatgaca agtgaagatt ttttggatgc ttttgaaaag 2041 cttctgaagc ttggacttaa ggatcagcag gagagagaaa tcattcacgt tctcatggat 2101 tgctgccttc aagagaaaac ttacaatccc ttctatgctt tcctggctag caaattctgt 2161 gaatatgaaa ggagatttca gatgactttc cagttcagca tatgggacaa atttcgggac 2221 ttggaaaact tgccagctac gaatttctct aatttggttc atctggtggc ccacttgttg 2281 aagacaaaat cgctttccct ttccatctta aaggtagttg aattcagtga attggacaaa 2341 cccagagtcc gttttttacg aaaagtatta agtatcctat taatggaaac agaagttgaa 2401 gacctcagtt taattttcac aagagtatct gacaacccaa agctgggggt gttacgtgag 2461 ggtttgaagc ttttcatcag ccacttcttg ctaaagaacg cacaggccca cagaagcgcc 2521 gacgaagcca acgtgctgag agagaaagct gaccttgcaa cgaagtgtct gcaaggaaaa 2581 gcttccctga gaatgtagtc agggaaggaa ggagggcagg tggccctttg actgtaaaat 2641 gtccttggta aacccaaagg cttattctgt tgcctgcgtg tgaatgtttg gtagagctat 2701 atcattgtct gttaatgtat tatattttga gatttttttt gatctaaggt tttattgttt 2761 gtatttcaag ccattttcaa ataactatct tgggggtgag aggagaagga gggagggaaa 2821 aggggtcagg cacactggac agggttctct aagcagtgag gctggtgtgt atgattgtct 2881 taaaattttt taatagatat ggccgagcgt gatggctcac ccctgtaatc ccagcacttt 2941 gtgaggccaa ggtgggcgga tcacttgagg ccaggaattt gaaaccagcc tgggcaaaac 3001 cctgtctcta ctaaaaatat aaaaattagc caggcatgat ggcacatgct ggtaatagca 3061 gctactgagg tggctgaggc acaagaattg cttggaccct ggaggtagag gctgcagtga 3121 gccaagattg taccactgta ctccagcctg ggctggacag tgagactttt gacagtgaga 3181 ctgtcaaaaa aaaaaaaaaa attaatagat aaaacaggcc actagagggt gcagttataa 3241 agaaattgat gaggttttta cctttttaaa atattggtta gaagttcaaa aaccatccct 3301 taaaggtgat tgtttttttg agacagagtc ttgctctgtc acccagagtg gagtgcagtg 3361 tcctgtaatc tcagctcact gcaacctcta cctcccgggt tcaagcgatt ctcctgcctc 3421 agcctcttta gctgggacta caggcgcacg ccaccacgcc cggctaattt ttgtatttta 3481 gtagagatgg gtttcaccat gttggcaagg ctggtcttga actcctgacc tcaggtgata 3541 cacccatctc ggcctcccaa agtgctggga ttacaggctt gagccaccac gcccagctta 3601 aatgtgattc ttgatactgt tttaagtatt taggttgcaa ttaactttgg caaagtcagt 3661 cgacataagc cctgtggata tggccttatg tacactgtaa tgcagacagg tgcttttcat 3721 cattcatgta acattctcac acagttgagg atattcatct cctcaccaat tccagattgt 3781 aaatgtacca tcttaaacaa ctctgaggtc accaaacagt agttatttga ctgttaatag 3841 gtgctacttg cttgcaagga tttggagatg taaacatgaa gaaaatatag ttactgcctg 3901 caaagaatta acatccgtct agtgggagaa acaaacacac cccactcact aagtatggaa 3961 aactgattct gggaggaagc agaaatgtcc ctagataaca gcatgtattg cagataccca 4021 aatgtttatt gttttctcag cccttcaatt ttgcttttct ctctcaaatg ctacagactc 4081 aatttaaatc ttacctttga ttgttgaaaa aagtcactaa gatgtgaata cagaatagac 4141 attgagaggt tatatatgtc caaaactcat ctgtccagca gtcaccgtcc tcttcagagt 4201 ggtcacgttg ggcagatggg cacaggtgct ggtgatgcct ctcctgggca aaacgcccca 4261 tttgtggcac tttcagatac tatttattta ctttttaaga gagagacagg ctcactctgt 4321 cacccaggcc agagtgcagt ggcacgatca tagttaccgc agcatcaaat tcctggactg 4381 aagcggtcct tttgcctcag cctcgcggat agctaggacc acaagcagta gagacaagat 4441 ctccgtatgt tatacaggct ggcctcaagt gatcctctta ccttggcctc ccaaacaccg 4501 ggattatagg cgtgagcccc cgtgcctggc ctcaaatttt attttagctc gaccctatgg 4561 cagtttgtgt ttggaaatcg tgatgtgaag tcatcagtat ctgtgcatat ccctaaacta 4621 atggtttaag ctttgaagca tgcgcaagca acatgaacaa ctgaatacag aaagtaactg 4681 aaagcagcac agagactgtg tcgtccctac agacttctaa ccctgcattc agcaacatca 4741 ttcgacccga agccagattc aaaccctatg tcttctagca ggttctgaat ttagaggaca 4801 aataaggtga caggtactaa gagaagagtg aattaagtga aaatcttccc tttgttaagg 4861 agctttttaa caagagtgtc tttgctgggt ggtgattggg atgtaacaga tcagttctac 4921 tggacttgta gcttgatagt gaaataagga gcttgggcta aggtataaat caacacactg 4981 cttccttcct ccagaaggtc ttactgtgaa ggaaaaaatg tcagttgaac taaattgtgc 5041 ttcacgcctc ggtagatttg cattctgatg caagccccca acctcacgga ccaagaggat 5101 ccctggctgc ctgtgaatgg cccacatttg agtggtgcta acttgatgtg agtaggcatt 5161 aattatgggt gcggctacta agatgggaaa aactatcacg acagtggcac cacctgattt 5221 catgatgtac catatgcagt aacccatgtt tgaggtacag aattgaagct gatttttctg 5281 caaaagatga atttctataa acaatcccat ttttatattt tattattaaa acaaaaatac 5341 ctctctttgc tagagagtta tatgtatgac ttaaattatt agctatggtt tgcatttagt 5401 acatggcaga ttgcctgtaa gtctgttcat tttaacaaca tacagggctg ggcacggtgg 5461 ctcacgcctg taatcccagc actttgggag gttgcgggtg gatcacttga ggtcaggagt 5521 tcgagaccag cctggccaac atggcaaaac cccgtctcta tgaaaaatat aaaaattagc 5581 tgggcatggt ggcaggcacc tgtaatccca gctactcggg aggctgaggc aggagaatcg 5641 cttgaacctg ggaggcggat gttgcagtga gcagagatcg tgccattgca ctccagcctg 5701 ggaacaagag tgaaactctc aaaagcagaa acaaaaaccc aacatatatg ggctgttaga 5761 tagtaattgt aatttcgtat aaatagtaaa tgagtacatc ttgattaaaa gctatgaatt 5821 cagaattgct tttaaatata tagggggttt tttgaaattt attacagtgc aattgaaaat 5881 acacttaaaa tactgcagga tgcttagtgc tcagtgttat gtatgaactt gtggacttta 5941 caatgcaggt tgagaactgc taatgtatag aatgactaaa cagctgtctt tcagggtatc 6001 atttttaaag gtataaggaa caaactttaa tgtattgaaa tgcataaata aaatttattt 6061 tttatatttt gtttagaaaa aa //