LOCUS AY546099 3286 bp mRNA linear HUM 03-APR-2005
DEFINITION Homo sapiens staufen protein T4 variant mRNA, complete cds;
alternatively spliced.
ACCESSION AY546099
VERSION AY546099.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3286)
AUTHORS Mao,Y., Xie,Y. and Jin,F.
TITLE Cloning and characterization of a splicing variant of human staufen
2 protein
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3286)
AUTHORS Mao,Y., Xie,Y. and Jin,F.
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2004) School of Life Sciences, Institute of
Genetics, 220 Handan Rd., Shanghai 200433, P.R.China
FEATURES Location/Qualifiers
source 1..3286
/db_xref="H-InvDB:HIT000331908"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="20"
CDS 363..1871
/note="RNA binding protein; alternatively spliced"
/codon_start=1
/product="staufen protein T4 variant"
/protein_id="AAS76637.1"
/translation="MKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPL
LYQVELSVGGQQFNGKGKTRQAAKHDAAAKALRILQNEPLPERLEVNGRESEEENLNK
SEISQVFEIALKRNLPVNFESFPLKQVARESGPPHMKNFVTKVSVGEFVGEGEGKSKK
ISKKNAAIAVLEELKKLPPLPAVERVKPRIKKKTKPIVKPQTSPEYGQGINPISRLAQ
IQQAKKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEI
LGFKVPQAQPTKPALKSEEKTPIKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLS
HQQLPAGILPMVPEVAQAVGVSQGHHTKDFTRAAPNPAKATVTAMIARELLYGGTSPT
AETILKNNISSGHVPHGPLTRPSEQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSS
QPPLISHGIGKDVESCHDMAALNILKLLSELDQQSTEMPRTGNGPMSVCGRC"
BASE COUNT 892 a 818 c 756 g 820 t
ORIGIN
1 acttcctgcc gggctgcggg cgcctgagcg ctcttcagcg tttgcgcggc ggctgcgcgt
61 ctctctcggc tcccgcttcc tttgaccgcc tccccccccc ggcccggcgg cgcccgcctc
121 ctccacggcc actccgcctc ttccctccct tcgtcccttc ttcctctccc ttttttcctt
181 cttccttccc ctcctcgccg ccaccgccca ggaccgccgg ccgggggacg agctcggagc
241 agcagccaga gtttattaac cacttaacct ctcagaactg aacaaagaca acattgttcc
301 tggaacgccc tctttttaaa aaagaaagca taacccctac tgtagaacta aatgcactgt
361 gcatgaaact tggaaaaaaa ccaatgtata agcctgttga cccttactct cggatgcagt
421 ccacctataa ctacaacatg agaggaggtg cttatccccc gaggtacttt tacccatttc
481 cagttccacc tttactttat caagtggaac tttctgtggg aggacagcaa tttaatggca
541 aaggaaagac aagacaggct gcgaaacacg atgctgctgc caaagcgttg aggatcctgc
601 agaatgagcc cctgccagag aggctggagg tgaatggaag agaatccgaa gaagaaaatc
661 tcaataaatc tgaaataagt caagtgtttg agattgcact taaacggaac ttgcctgtga
721 atttcgagtc tttccctctg aaacaggtgg cccgggagag tggcccaccc cacatgaaga
781 actttgtgac caaggtttcg gttggggagt ttgtggggga aggtgaaggg aaaagcaaga
841 agatttcaaa gaaaaatgcc gccatagctg ttcttgagga gctgaagaag ttaccgcccc
901 tgcctgcagt tgaacgagta aagcctagaa tcaaaaagaa aacaaaaccc atagtcaagc
961 cacagacaag cccagaatat ggccagggga tcaatccgat tagccgactg gcccagatcc
1021 agcaggcaaa aaaggagaag gagccagagt acacgctcct cacagagcga ggcctcccgc
1081 gccgcaggga gtttgtgatg caggtgaagg ttggaaacca cactgcagaa ggaacgggca
1141 ccaacaagaa ggtggccaag cgcaatgcag ccgagaacat gctggagatc cttggtttca
1201 aagtcccgca ggcgcagccc accaaacccg cactcaagtc agaggagaag acacccataa
1261 agaaaccagg ggatggaaga aaagtaacct tttttgaacc tggctctggg gatgaaaatg
1321 ggactagtaa taaagaggat gagttcagga tgccttatct aagtcatcag cagctgcctg
1381 ctggaattct tcccatggtg cccgaggtcg cccaggctgt aggagttagt caaggacatc
1441 acaccaaaga ttttaccagg gcagctccga atcctgccaa ggccacggta actgccatga
1501 tagcccgaga gttgttgtat gggggcacct cgcccacagc cgagaccatt ttaaagaata
1561 acatctcttc aggccacgta ccccatggac ctctcacgag accctctgag caactggact
1621 atctttccag agtccaggga ttccaggttg aatacaaaga cttccccaaa aacaacaaga
1681 acgaatttgt atctcttatc aattgctcct ctcagccacc tctgatcagc catggtatcg
1741 gcaaggatgt ggagtcctgc catgatatgg ctgcgctgaa catcttaaag ttgctgtctg
1801 agttggacca acaaagtaca gagatgccaa gaacaggaaa cggaccaatg tctgtgtgtg
1861 ggaggtgctg aaccttttct ggccatgaac cattataaaa tcccaacata tatactgaaa
1921 atactgaaac tgctttgaaa atttggaatt tctgatacct ccagtgggcc gagagacacg
1981 gtgggtaaag gatgtgggca gcagcaggga agacaacaga aacacaagga ggcggctgtg
2041 gccgggctgg actgtgcggg ggtttgttgt gatggccact cggtgacctg gcggtcccta
2101 cgcaatagca gctgcctgtg gggaagaggg gctgcccagc cagctggttc tcccgggaca
2161 ccagcagatc cacaccctgg gcacctccgt gtttggtctt ttttttcccc tgtgtgaaag
2221 aagaaacggc acgacccctt ctcaagctgg ctcactcaga cacattggga caaaccctgg
2281 acagccatgc cagagagagg cctttgaccg gccccagagc taaaagcacc agagaaaatc
2341 aaatgcttcc tactcagcgt gacccaactt ttctagtgtg ccacggcccc accacctcct
2401 gcagtaccca caccatcacc actgctttct cttccaacag tgatctgtat tcttagtttc
2461 attattttct tttgattgat atgacactat ataaaatttt catttgagaa tttctcaatt
2521 gtatctagtt aaatagcaca gtttggaaac ttgtctgaga ctgactttat caataatcta
2581 accgacaaag atcatatcca tgtgtatgtg gttagacatt tttatttcat tgactaaccc
2641 aggacagttt cagtgatgca aattgtgtgc cctctggttc agctgaaaca gtcctggact
2701 ttcaaaaacc ttgaataagt ctcccacagt tgtataaatt ggacaattta ggaattttaa
2761 actttagatg atcatttggt tccattttta tttcattttt atttttgtta atgcaaacag
2821 gacttaaatg aactttgatc tctgttttaa agattattaa aaaacattgt gtatctatac
2881 atatggctct tgaggactta gctttcacta cactacagga tatgatctcc atgtagtcca
2941 tataaacctg cagagtgatt ttccagagtg ctcgatactg ttaattacat ctccattagg
3001 gctgaaaaga atgacctacg tttctgtata cagctgtgtt gcttttgatg ttgtgttact
3061 gtacacagaa gtgtgtgcac tgaggctctg cgtgtggtcc gtatggaaag cctggtagcc
3121 ctgcgagtta agtactgctt ccattcattg tttacgctgg aatttttctc cccatggaat
3181 gtaagtaaaa cttaagtgtt tgtcatcaat aaatggtaat actaaatttt tttgttaatt
3241 tattctcaaa tgccactact gctaggttgg tcccctccca acttgc
//