LOCUS AY501390 2552 bp mRNA linear HUM 17-DEC-2004
DEFINITION Homo sapiens retinoic acid receptor beta 5 (RARB) mRNA, complete
cds.
ACCESSION AY501390
VERSION AY501390.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2552)
AUTHORS Peng,X., Maruo,T., Cao,Y., Punj,V., Mehta,R., Das Gupta,T.K. and
Christov,K.
TITLE A Novel RAR{beta} Isoform Directed by a Distinct Promoter P3 and
Mediated by Retinoic Acid in Breast Cancer Cells
JOURNAL Cancer Res. 64 (24), 8911-8918 (2004)
PUBMED 15604252
REFERENCE 2 (bases 1 to 2552)
AUTHORS Peng,X., Takeshi,M., Cao,Y., Das Gupta,T.K. and Christov,K.T.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2003) Surgical Oncology, University of Illinois
at Chicago, 840 S. Wood St. (M/C 820), Chicago, IL 60612, USA
FEATURES Location/Qualifiers
source 1..2552
/db_xref="H-InvDB:HIT000255021"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p24"
gene 1..2552
/gene="RARB"
5'UTR 1..237
/gene="RARB"
CDS 238..1248
/gene="RARB"
/note="RARbeta isoform 5"
/codon_start=1
/product="retinoic acid receptor beta 5"
/protein_id="AAS85757.1"
/translation="MIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRN
KKKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLD
LGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTP
EQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICG
DRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERV
ITLKMEIPGSMPPLIQEMLENSEGHEPLTPSSSGNTAEHSPSISPSSVENSGVSQSPL
VQ"
BASE COUNT 780 a 548 c 490 g 734 t
ORIGIN
1 atagaaaaaa ttctggaagg tcgtacacag tgaatttctc tgagtgaaaa gattgtggca
61 attgaaacac agagcaccag ctctgaggaa ctcgtcccaa gccccccatc tccacttcct
121 ccccctcgag tgtacaaacc ctgcttcgtc tgccaggaca aatcatcagg gtaccactat
181 ggggtcagcg cctgtgaggg atgtaagggc tttttccgca gaagtattca gaagaatatg
241 atttacactt gtcaccgaga taagaactgt gttattaata aagtcaccag gaatcgatgc
301 caatactgtc gactccagaa gtgctttgaa gtgggaatgt ccaaagaatc tgtcaggaat
361 gacaggaaca agaaaaagaa ggagacttcg aagcaagaat gcacagagag ctatgaaatg
421 acagctgagt tggacgatct cacagagaag atccgaaaag ctcaccagga aactttccct
481 tcactctgcc agctgggtaa atacaccacg aattccagtg ctgaccatcg agtccgactg
541 gacctgggcc tctgggacaa attcagtgaa ctggccacca agtgcattat taagatcgtg
601 gagtttgcta aacgtctgcc tggtttcact ggcttgacca tcgcagacca aattaccctg
661 ctgaaggccg cctgcctgga catcctgatt cttagaattt gcaccaggta taccccagaa
721 caagacacca tgactttctc agacggcctt accctaaatc gaactcagat gcacaatgct
781 ggatttggtc ctctgactga ccttgtgttc acctttgcca accagctcct gcctttggaa
841 atggatgaca cagaaacagg ccttctcagt gccatctgct taatctgtgg agaccgccag
901 gaccttgagg aaccgacaaa agtagataag ctacaagaac cattgctgga agcactaaaa
961 atttatatca gaaaaagacg acccagcaag cctcacatgt ttccaaagat cttaatgaaa
1021 atcacagatc tccgtagcat cagtgctaaa ggtgcagagc gtgtaattac cttgaaaatg
1081 gaaattcctg gatcaatgcc acctctcatt caagaaatgc tggagaattc tgaaggacat
1141 gaacccttga ccccaagttc aagtgggaac acagcagagc acagtcctag catctcaccc
1201 agctcagtgg aaaacagtgg ggtcagtcag tcaccactcg tgcaataaga cattttctag
1261 ctacttcaaa cattccccag taccttcagt tccaggattt aaaatgcaag aaaaaacatt
1321 tttactgctg cttagttttt ggactgaaaa gatattaaaa ctcaagaagg accaagaagt
1381 tttcatatgt atcaatatat atactcctca ctgtgtaact tacctagaaa tacaaacttt
1441 tccaatttta aaaaatcagc catttcatgc aaccagaaac tagttaaaag cttctatttt
1501 cctctttgaa cactcaagat gcatggcaaa gacccagtca aaatgattta cccctggtta
1561 agtttctgaa gactttgtac atacagaagt atggctctgt tctttctata ctgtatgttt
1621 ggtgctttcc ttttgtcttg catactcaaa ataaccatga caccaaggtt atgaaataga
1681 ctactgtaca cgtctaccta ggttcaaaaa gataactgtc ttgctttcat ggaatagtca
1741 agacatcaag gtaaggaaac aggactattg acaggactat tgtacagtat gacaagataa
1801 ggctgaagat attctacttt agttagtatg gaagcttgtc tttgctcttt ctgatgctct
1861 caaactgcat cttttatttc atgttgccca gtaaaagtat acaaattccc tgcactagca
1921 gaagagaatt ctgtatcagt gtaactgcca gttcagttaa tcaaatgtca tttgttcaat
1981 tgttaatgtc actttaaatt aaaagtggtt tattacttgt ttaatgacat aactacacag
2041 ttagttaaaa aaaatttttt tacagtaatg atagcctcca aggcagaaac acttttcagt
2101 gttaagtttt tgtttacttg ttcacaagcc attagggaaa tttcatggga taattagcag
2161 gctggtctac cactggacca tgtaactcta gtgtccttcc tgattcatgc ctgatattgg
2221 gatttttttc cagcccttct tgatgccaag ggctaattat attacatccc aaagaaacag
2281 gcatagaatc tgcctccttt gaccttgttc aatcactatg aagcagagtg aaagctgtgg
2341 tagagtggtt aacagataca agtgtcagtt tcttagttct catttaagca ctactggaat
2401 tttttttttt gatatattag caagtctgtg atgtactttc actggctctg tttgtacatt
2461 gagattgttt gtttaacaat gctttctatg ttcatatact gtttaccttt ttccatggac
2521 tctcctggca aagaataaaa tatatttatt tt
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