LOCUS AY497057 5889 bp mRNA linear HUM 18-FEB-2005 DEFINITION Homo sapiens bromodomain and WD repeat domain containing 3 variant BRWD3-M (BRWD3) mRNA, complete cds, alternatively spliced. ACCESSION AY497057 VERSION AY497057.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5889) AUTHORS Kalla,C., Nentwich,H., Schlotter,M., Mertens,D., Wildenberger,K., Dohner,H., Stilgenbauer,S. and Lichter,P. TITLE Translocation t(X;11)(q13;q23) in B-cell chronic lymphocytic leukemia disrupts two novel genes JOURNAL Genes Chromosomes Cancer 42 (2), 128-143 (2005) PUBMED 15543602 REFERENCE 2 (bases 1 to 5889) AUTHORS Schaffner,C. and Schlotter,M. TITLE Direct Submission JOURNAL Submitted (09-DEC-2003) Div. Molecular Genetics (B060), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, Heidelberg D-69120, Germany FEATURES Location/Qualifiers source 1..5889 /db_xref="H-InvDB:HIT000254963" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="X" /map="Xq13" gene 1..5889 /gene="BRWD3" CDS 1280..5476 /gene="BRWD3" /note="transcription factor; alternatively spliced; contains exons 4b and 12a, but lacks exons 5 and 9" /codon_start=1 /product="bromodomain and WD repeat domain containing 3 variant BRWD3-M" /protein_id="AAS45482.1" /translation="MATKMTGNNLPSGEDKITKLKVTMVAWDRYDTTVITAVNNFLLK VWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFN MIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPL IRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGY VANGDGEVVEQVIGQQTNDQDESILDGIIRELQREQDLRLINEGDVPHLPVNRAYSVN GALRSPNMDISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNEL NNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQHT YQTRSNIEHNSQASCQNSGVQEDSDSSSEEDETVGTSDASVEDPVVEWQSESSSSDSS SEYSDWTADAGINLQPPKRQTRQTTRKICSSSDEENLKSLEERQKKPKQTRKKKGGLV SIAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNL QKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMP DVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYS VHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRD EECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRR ISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAE ERNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLIYE REDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVK ETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNKKSRIYSMMLRLSALFESHIKNIISEY KSAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGKQKQMKLQPKNDQNTSVSHARTS SPFSSPVSDAAEGLSLYLLDDEPDGPFSSSSFGGYSRSGNSHDPGKAKSFRNRVLPVK QDHSLDGPLTNGDGREPRTGIKRKLLSASEEDENMGGEDKEKKETKEKSHLSTSESGE LGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHGNGKRNWK TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGASRGATRAK RARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRS GRVRKMTEKARVSHLMGWNY" misc_feature 1298..1690 /gene="BRWD3" /note="Region: contains three WD40 repeats" misc_feature 3485..3805 /gene="BRWD3" /note="Region: bromo domain" misc_feature 3971..4360 /gene="BRWD3" /note="Region: bromo domain" BASE COUNT 1837 a 1148 c 1371 g 1533 t ORIGIN 1 gatctgggta cccgtagctg ttgtcaccgg ggtgaattgg cttcttccct caaaaggggc 61 agacaacgct ggggtcttaa ctcgtccccg ctttatgctt gtgggaggca gtttttcagg 121 atttccttct cgacccccct tccccccccc cccatatact tgtctagctc tgagccaata 181 gctatcaggc cgagagaaat aaagacggta aagtgttgag gactgggaca caggttgggt 241 ccagttgatg gggagcggag gcttttcctt catcatttgc ctccgcttcc ccctttcttt 301 tcgtccggcc cccagctgat tccgcgccgc ttagattggg aggggaaaga gcaccgaaga 361 agcttcgagg atctgactgt aagagtacac tatggaatgg gtctgctttt gcggctctgc 421 atagaggcag acctccagaa ctacctgtaa attatgtgaa acctccaaat gtggtgaata 481 tcacctctgc caggcaatta accggctgta gtcgctttgg tcatattttc ccttcatctg 541 cttaccagca cattaagatg cataagagaa ttctggggca cttgtcatct gtctactgtg 601 tagcatttga ccgaagcggg agaagaattt ttacaggttc cgatgactgt ttagtaaaaa 661 tttgggctac agatgatgga cgccttcttg ctacacttcg tggacactct gctgaaattt 721 ctgacatggc tgttaactat gaaaacactc ttattgctgc aggcagctgt gataaggtag 781 taagagtatg gtgtcttcga acttgtgcac ccgttgcagt ccttcagggc cattcagctt 841 ctattacttc catacagaga tcgcccggtg aaatttactg agagatccag acctggagtc 901 cagatatctt gttcatcttt cagttctggt ggtatgttca ttacaactgg tagtactgac 961 catgtgatta gaatatatta tttgggttct gaggttcctg agaaaattgc tgaattagag 1021 tcacatacgg ataaagttgt tgctgttcag ttctgtaaca atggagacag aatgacaaga 1081 taatgaaaaa tgataatccc aatattgcca agggttttgg gaaaatggac acttctacaa 1141 ctcgtgatga gattataaat tattaaaaaa acttttcggg gaaacaattt ggcatttaag 1201 atttgttagt ggaagtcgag atggaacggc aagaatttgg cagtatcagc aacaagaatg 1261 gaagagtata gtgctagaca tggctactaa aatgactggc aataatttgc catctggaga 1321 agacaagatc actaaactta aggtgactat ggtggcctgg gatcgctatg ataccacagt 1381 tattactgca gtgaacaatt ttcttttgaa agtgtggaat tctatcacag gacagcttct 1441 tcatacatta tctggacatg atgatgaagt attcgttcta gaagcccatc catttgatca 1501 aaggatcata ctttcagcag gtcatgatgg gaacattttt atttgggacc ttgaccgggg 1561 gaccaaaatt cggaattact ttaacatgat tgaaggccaa ggccatggtg cggtgtttga 1621 ttgtaaattt tcaccagatg gaaaccattt tgcctgcaca gattctcatg gacatttgct 1681 gctttttggt tttggatgca gtaaatacta cgaaaagatt ccagatcaga tgttcttcca 1741 cacggattat cgtcctctta ttcgtgatgc caataactat gtattggatg aacaaaccca 1801 acaagctcct cacctcatgc ctcctccatt tttggtggat gttgatggaa atcctcatcc 1861 cacaaaattc caacggttgg taccaggacg ggaaaattgt aaagatgaac agcttatacc 1921 acagctggga tatgtggcta atggtgatgg tgaggtagta gaacaggtaa ttgggcagca 1981 aaccaatgac caagatgaga gcattcttga tggaataatc agggagctgc agagagaaca 2041 agacctgaga ctaattaatg aaggagatgt tccacattta ccagttaata gagcatactc 2101 tgttaatggt gctctgagaa gtccaaacat ggacatatct tcttccccaa acatcaggct 2161 tcgaagacat agtagtcaaa ttgaaggtgt tagacaaatg cataacaatg ctcctcggag 2221 ccagatggcc actgaaagag atctcatggc gtggagcaga agagtggtgg tcaatgaact 2281 aaataatggg gttagtaggg tacaggaaga atgtcgaact gcaaaaggtg acatagaaat 2341 cagtctttat acagttgaaa agaagaaaaa gccatcttac actactcaaa ggaatgatta 2401 tgagcctagc tgtgggcgtt ctttacgcag gacacagcgc aaacgtcagc atacttacca 2461 aacacggtcc aacatagagc ataattcaca ggcatcatgt caaaattcag gtgtacagga 2521 agactcagac agttcttcag aggaagatga aactgttggc acaagtgacg cttcggtaga 2581 ggatcctgtt gttgaatggc aaagtgaaag ttcttccagt gactcatcaa gtgaatattc 2641 tgattggaca gcagatgctg gaataaattt acaaccccca aaaagacaaa ccagacagac 2701 aacacgtaaa atatgcagca gctctgatga ggaaaatttg aagtccctag aagaaaggca 2761 gaagaaacct aagcagacta gaaagaagaa aggaggactg gtttctatag caggtgagcc 2821 taatgaagaa tggtttgccc ctcagtggat cttggatact ataccccgac gttccccatt 2881 tgtcccacaa atgggagatg agcttatcta ttttaggcaa ggacatgaag cttatgttcg 2941 ggctgtaagg aaatcgaaaa tatacagtgt taatttacaa aaacagccat ggaacaaaat 3001 ggatctcagg gagcaagagt ttgttaagat tgtaggaatc aaatatgagg ttggcccacc 3061 cacactgtgc tgcttgaagc ttgcatttct ggacccaatt tcaggcaaaa tgactggaga 3121 atctttttcc attaagtatc atgacatgcc ggatgtcatt gacttccttg tgctacatca 3181 gttttataat gaagccaaag aaaggaactg gcagattggt gatagattcc gcagtataat 3241 agatgacgcc tggtggtttg ggactgtgga gagtcagcag ccttttcaac cagagtatcc 3301 tgatagttct ttccagtgtt acagtgttca ctgggacaat aatgagagag aaaagatgag 3361 cccatgggat atggagccaa ttccagaagg aactgccttt ccagatgaag ttggtgctgg 3421 tgttcctgtc tcccaggaag aattgactgc tttgctatac aaaccccagg aaggagagtg 3481 gggggctcat tccagagacg aagaatgtga acgggttatt cagggcatca accaccttct 3541 ttccctggat tttgccagcc cttttgctgt tccagtggat ctcagtgcct accccttgta 3601 ttgtactgta gttgcttatc caactgacct caataccatc aggcggagac ttgaaaatcg 3661 cttttacagg agaatatcag cattaatgtg ggaggtacgc tatattgaac ataatgccag 3721 gactttcaat gagccagaca gtcctatagt taaagcagct aaaattgtaa ctgatgtctt 3781 acttcgattt attggggatc agagctgtac tgatatactg gatacttata ataaaattaa 3841 agcagaagaa cgaaacagta ctgatgcaga ggaggataca gaaattgttg atttagattc 3901 agacggtcct ggtacttcat ctggaagaag ggtcaaatgc cgaggcagaa gacagtcttt 3961 aaagtgtaat cctgatgctt ggaaaaaaca atgcaaggaa ctattgagcc tcatttatga 4021 acgtgaagac tcggagccat ttcgacagcc agctgatctt ctttcttacc caggtcatca 4081 ggagcaagag ggagaatcct cagagtctgt tgttccagaa agacaacaag attcatctct 4141 ttctgaggat tatcaagatg ttatagatac tcctgtggac ttcagcactg tgaaagaaac 4201 tttggaagca ggaaactatg gtagtcctct ggaattttat aaggatgttc gccaaatatt 4261 caacaactcc aaagcttata cctctaataa aaagtcaagg atctatagca tgatgctgcg 4321 attatctgcc ttatttgaaa gtcatatcaa aaatatcatc tctgaatata agtcagcaat 4381 ccagagtcag aagaggagaa ggccacggta cagaaaacgt ctaagaagca gcagcagttc 4441 attatctagt agtggagcac ctagtccaaa agggaagcag aaacaaatga agttgcagcc 4501 taaaaatgac cagaatacct cagtatctca tgccaggact agctctcctt tctcatctcc 4561 tgtttcagat gctgctgaag ggctttcact atatctactt gatgatgagc cagatgggcc 4621 attttcttca tcgagcttcg gtggatatag ccgaagtgga aatagccatg acccagggaa 4681 agccaaatca tttcggaata gagttttgcc agttaaacaa gatcactccc ttgatggacc 4741 ccttacaaat ggtgatggca gagagccccg gacaggaatc aagagaaaac tacttagtgc 4801 atcagaagaa gatgaaaaca tgggaggaga agataaagag aaaaaagaaa caaaagagaa 4861 atctcattta tccacctcag agagtggaga gttaggatcc agtttaagtt ctgaaagtac 4921 ctgtggttct gactctgact ctgaatcaac ttccagaaca gatcaagatt acgtagatgg 4981 agaccatgat tatagcaaat tcatacaaac cagacctaaa agaaaactca gaaagcaaca 5041 tggcaatgga aaaagaaatt ggaagaccag aggcacagga ggaagaggca gatggggaag 5101 atggggtaga tggagtagag gaggcagagg aagaggaggc aggggacgag ggagtcgagg 5161 aagaggtgga ggtggcacta gggggagggg aagagggaga ggaggaagag gtgcttctag 5221 aggagctacc agagccaaac gagcacgtat tgcagatgat gaatttgata ccatgttttc 5281 aggacgtttc agtagactgc ctcgaattaa aacaagaaac caaggcagga ggactgtttt 5341 atataatgat gattctgata atgacaattt tgtgtccact gaggatcctc tgaatcttgg 5401 tacatccaga tcaggcagag tgcgtaaaat gacagaaaaa gccagggtta gccatctcat 5461 gggatggaat tattaacagt taataaattt agaataactt aaaaaattca atggccttct 5521 actgcaggga atttaccagg aaatctacaa agcaagttgt gtggggactt ctgcttcctt 5581 tcacattggt gcttttccat ttatgccagt atacatttgt ttcaagactt ttgatctcca 5641 cacttcattt gttcaaataa gccttactca ttaggcctta aattaaaaga aattctgccc 5701 acacacacac aaacacatac acacacatac acacacacag acacacacac acgaaacaca 5761 acacagacac tacagattta ctacattaaa ggagcattca gcttcttaag agtagcatga 5821 catttttatc tcaatagaat agccctcttt tgcttttgta tcacagaagt atagcacctt 5881 cttacagag //