LOCUS AY497051 5645 bp mRNA linear HUM 18-FEB-2005 DEFINITION Homo sapiens bromodomain and WD repeat domain containing 3 variant BRWD3-F (BRWD3) mRNA, complete cds, alternatively spliced. ACCESSION AY497051 VERSION AY497051.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5645) AUTHORS Kalla,C., Nentwich,H., Schlotter,M., Mertens,D., Wildenberger,K., Dohner,H., Stilgenbauer,S. and Lichter,P. TITLE Translocation t(X;11)(q13;q23) in B-cell chronic lymphocytic leukemia disrupts two novel genes JOURNAL Genes Chromosomes Cancer 42 (2), 128-143 (2005) PUBMED 15543602 REFERENCE 2 (bases 1 to 5645) AUTHORS Schaffner,C. and Schlotter,M. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) Div. Molecular Genetics (B060), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, Heidelberg D-69120, Germany FEATURES Location/Qualifiers source 1..5645 /db_xref="H-InvDB:HIT000254957" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="X" /map="Xq13" gene 1..5645 /gene="BRWD3" CDS 1036..5232 /gene="BRWD3" /note="transcription factor; alternatively spliced; contains exons 1, 2, 3, 4a, and 12a, but lacks exons 3, 5, 7, and 8" /codon_start=1 /product="bromodomain and WD repeat domain containing 3 variant BRWD3-F" /protein_id="AAS45476.1" /translation="MATKMTGNNLPSGEDKITKLKVTMVAWDRYDTTVITAVNNFLLK VWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFN MIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPL IRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGY VANGDGEVVEQVIGQQTNDQDESILDGIIRELQREQDLRLINEGDVPHLPVNRAYSVN GALRSPNMDISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNEL NNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQHT YQTRSNIEHNSQASCQNSGVQEDSDSSSEEDETVGTSDASVEDPVVEWQSESSSSDSS SEYSDWTADAGINLQPPKRQTRQTTRKICSSSDEENLKSLEERQKKPKQTRKKKGGLV SIAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNL QKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMP DVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYS VHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRD EECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRR ISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAE ERNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLIYE REDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVK ETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNKKSRIYSMMLRLSALFESHIKNIISEY KSAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGKQKQMKLQPKNDQNTSVSHARTS SPFSSPVSDAAEGLSLYLLDDEPDGPFSSSSFGGYSRSGNSHDPGKAKSFRNRVLPVK QDHSLDGPLTNGDGREPRTGIKRKLLSASEEDENMGGEDKEKKETKEKSHLSTSESGE LGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHGNGKRNWK TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGASRGATRAK RARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRS GRVRKMTEKARVSHLMGWNY" misc_feature 1036..1446 /gene="BRWD3" /note="Region: contains three WD40 repeats" misc_feature 3241..3561 /gene="BRWD3" /note="Region: bromo domain" misc_feature 3727..4116 /gene="BRWD3" /note="Region: bromo domain" BASE COUNT 1791 a 1120 c 1310 g 1424 t ORIGIN 1 tctctctctc tctcactcac tcactctctc tctccctctc cctctcctct ccttcctcct 61 ccgcctcctc agctcttggg ctagaatatc tatgggtcga aacgtgatgc gatgaattcg 121 agagagagcg aaactaggac gaggagtgcg gcggaagcgg cgggactccc gggcatgggg 181 gcttcaccac aatagaggca gcgcccccac ccgcccccgc cagcccctcc ggagcgaagc 241 ccccaaaccc cctcgggaaa aggatggcgg cagcacctac ccagatcgaa gccgagctgt 301 attacctgat cgctaggttc ttgcagtctg gaccctgcaa caaatccgct cagctgattc 361 cgcgccgctt agattgggag gggaaagagc accgaagaag cttcgaggat ctgactgtaa 421 gagtacacta tggaatgggt ctgcttttgc ggctctgcat agaggcagac ctccagaact 481 acctgtaaat tatgtgaaac ctccaaatgt ggttttgtcc atcaactaaa ggcacaaaca 541 gatacctcac ttctactggt gctgatggaa caatctgttt ctggcaatgg catgtaaaaa 601 caatgaagtt tagagatcgc ccggtgaaat ttactgagag atccagacct ggagtccaga 661 tatcttgttc atctttcagt tctggtggta tgttcattac aactggtagt actgaccatg 721 tgattagaat atattatttg ggttctgagg ttcctgagaa aattgctgaa ttagagtcac 781 atacggataa agttgttgct gttcagttct gtaacaatgg agacagaatg acaagataat 841 gaaaaatgat aatcccaata ttgccaaggg ttttgggaaa atggacactt ctacaactcg 901 tgatgagatt ataaattatt aaaaaaactt ttcggggaaa caatttggca tttaagattt 961 gttagtggaa gtcgagatgg aacggcaaga atttggcagt atcagcaaca agaatggaag 1021 agtatagtgc tagacatggc tactaaaatg actggcaata atttgccatc tggagaagac 1081 aagatcacta aacttaaggt gactatggtg gcctgggatc gctatgatac cacagttatt 1141 actgcagtga acaattttct tttgaaagtg tggaattcta tcacaggaca gcttcttcat 1201 acattatctg gacatgatga tgaagtattc gttctagaag cccatccatt tgatcaaagg 1261 atcatacttt cagcaggtca tgatgggaac atttttattt gggaccttga ccgggggacc 1321 aaaattcgga attactttaa catgattgaa ggccaaggcc atggtgcggt gtttgattgt 1381 aaattttcac cagatggaaa ccattttgcc tgcacagatt ctcatggaca tttgctgctt 1441 tttggttttg gatgcagtaa atactacgaa aagattccag atcagatgtt cttccacacg 1501 gattatcgtc ctcttattcg tgatgccaat aactatgtat tggatgaaca aacccaacaa 1561 gctcctcacc tcatgcctcc tccatttttg gtggatgttg atggaaatcc tcatcccaca 1621 aaattccaac ggttggtacc aggacgggaa aattgtaaag atgaacagct tataccacag 1681 ctgggatatg tggctaatgg tgatggtgag gtagtagaac aggtaattgg gcagcaaacc 1741 aatgaccaag atgagagcat tcttgatgga ataatcaggg agctgcagag agaacaagac 1801 ctgagactaa ttaatgaagg agatgttcca catttaccag ttaatagagc atactctgtt 1861 aatggtgctc tgagaagtcc aaacatggac atatcttctt ccccaaacat caggcttcga 1921 agacatagta gtcaaattga aggtgttaga caaatgcata acaatgctcc tcggagccag 1981 atggccactg aaagagatct catggcgtgg agcagaagag tggtggtcaa tgaactaaat 2041 aatggggtta gtagggtaca ggaagaatgt cgaactgcaa aaggtgacat agaaatcagt 2101 ctttatacag ttgaaaagaa gaaaaagcca tcttacacta ctcaaaggaa tgattatgag 2161 cctagctgtg ggcgttcttt acgcaggaca cagcgcaaac gtcagcatac ttaccaaaca 2221 cggtccaaca tagagcataa ttcacaggca tcatgtcaaa attcaggtgt acaggaagac 2281 tcagacagtt cttcagagga agatgaaact gttggcacaa gtgacgcttc ggtagaggat 2341 cctgttgttg aatggcaaag tgaaagttct tccagtgact catcaagtga atattctgat 2401 tggacagcag atgctggaat aaatttacaa cccccaaaaa gacaaaccag acagacaaca 2461 cgtaaaatat gcagcagctc tgatgaggaa aatttgaagt ccctagaaga aaggcagaag 2521 aaacctaagc agactagaaa gaagaaagga ggactggttt ctatagcagg tgagcctaat 2581 gaagaatggt ttgcccctca gtggatcttg gatactatac cccgacgttc cccatttgtc 2641 ccacaaatgg gagatgagct tatctatttt aggcaaggac atgaagctta tgttcgggct 2701 gtaaggaaat cgaaaatata cagtgttaat ttacaaaaac agccatggaa caaaatggat 2761 ctcagggagc aagagtttgt taagattgta ggaatcaaat atgaggttgg cccacccaca 2821 ctgtgctgct tgaagcttgc atttctggac ccaatttcag gcaaaatgac tggagaatct 2881 ttttccatta agtatcatga catgccggat gtcattgact tccttgtgct acatcagttt 2941 tataatgaag ccaaagaaag gaactggcag attggtgata gattccgcag tataatagat 3001 gacgcctggt ggtttgggac tgtggagagt cagcagcctt ttcaaccaga gtatcctgat 3061 agttctttcc agtgttacag tgttcactgg gacaataatg agagagaaaa gatgagccca 3121 tgggatatgg agccaattcc agaaggaact gcctttccag atgaagttgg tgctggtgtt 3181 cctgtctccc aggaagaatt gactgctttg ctatacaaac cccaggaagg agagtggggg 3241 gctcattcca gagacgaaga atgtgaacgg gttattcagg gcatcaacca ccttctttcc 3301 ctggattttg ccagcccttt tgctgttcca gtggatctca gtgcctaccc cttgtattgt 3361 actgtagttg cttatccaac tgacctcaat accatcaggc ggagacttga aaatcgcttt 3421 tacaggagaa tatcagcatt aatgtgggag gtacgctata ttgaacataa tgccaggact 3481 ttcaatgagc cagacagtcc tatagttaaa gcagctaaaa ttgtaactga tgtcttactt 3541 cgatttattg gggatcagag ctgtactgat atactggata cttataataa aattaaagca 3601 gaagaacgaa acagtactga tgcagaggag gatacagaaa ttgttgattt agattcagac 3661 ggtcctggta cttcatctgg aagaagggtc aaatgccgag gcagaagaca gtctttaaag 3721 tgtaatcctg atgcttggaa aaaacaatgc aaggaactat tgagcctcat ttatgaacgt 3781 gaagactcgg agccatttcg acagccagct gatcttcttt cttacccagg tcatcaggag 3841 caagagggag aatcctcaga gtctgttgtt ccagaaagac aacaagattc atctctttct 3901 gaggattatc aagatgttat agatactcct gtggacttca gcactgtgaa agaaactttg 3961 gaagcaggaa actatggtag tcctctggaa ttttataagg atgttcgcca aatattcaac 4021 aactccaaag cttatacctc taataaaaag tcaaggatct atagcatgat gctgcgatta 4081 tctgccttat ttgaaagtca tatcaaaaat atcatctctg aatataagtc agcaatccag 4141 agtcagaaga ggagaaggcc acggtacaga aaacgtctaa gaagcagcag cagttcatta 4201 tctagtagtg gagcacctag tccaaaaggg aagcagaaac aaatgaagtt gcagcctaaa 4261 aatgaccaga atacctcagt atctcatgcc aggactagct ctcctttctc atctcctgtt 4321 tcagatgctg ctgaagggct ttcactatat ctacttgatg atgagccaga tgggccattt 4381 tcttcatcga gcttcggtgg atatagccga agtggaaata gccatgaccc agggaaagcc 4441 aaatcatttc ggaatagagt tttgccagtt aaacaagatc actcccttga tggacccctt 4501 acaaatggtg atggcagaga gccccggaca ggaatcaaga gaaaactact tagtgcatca 4561 gaagaagatg aaaacatggg aggagaagat aaagagaaaa aagaaacaaa agagaaatct 4621 catttatcca cctcagagag tggagagtta ggatccagtt taagttctga aagtacctgt 4681 ggttctgact ctgactctga atcaacttcc agaacagatc aagattacgt agatggagac 4741 catgattata gcaaattcat acaaaccaga cctaaaagaa aactcagaaa gcaacatggc 4801 aatggaaaaa gaaattggaa gaccagaggc acaggaggaa gaggcagatg gggaagatgg 4861 ggtagatgga gtagaggagg cagaggaaga ggaggcaggg gacgagggag tcgaggaaga 4921 ggtggaggtg gcactagggg gaggggaaga gggagaggag gaagaggtgc ttctagagga 4981 gctaccagag ccaaacgagc acgtattgca gatgatgaat ttgataccat gttttcagga 5041 cgtttcagta gactgcctcg aattaaaaca agaaaccaag gcaggaggac tgttttatat 5101 aatgatgatt ctgataatga caattttgtg tccactgagg atcctctgaa tcttggtaca 5161 tccagatcag gcagagtgcg taaaatgaca gaaaaagcca gggttagcca tctcatggga 5221 tggaattatt aacagttaat aaatttagaa taacttaaaa aattcaatgg ccttctactg 5281 cagggaattt accaggaaat ctacaaagca agttgtgtgg ggacttctgc ttcctttcac 5341 attggtgctt ttccatttat gccagtatac atttgtttca agacttttga tctccacact 5401 tcatttgttc aaataagcct tactcattag gccttaaatt aaaagaaatt ctgcccacac 5461 acacacaaac acatacacac acatacacac acacagacac acacacacga aacacaacac 5521 agacactaca gatttactac attaaaggag cattcagctt cttaagagta gcatgacatt 5581 tttatctcaa tagaatagcc ctcttttgct tttgtatcac agaagtatag caccttctta 5641 cagag //