LOCUS AY497048 6108 bp mRNA linear HUM 18-FEB-2005 DEFINITION Homo sapiens bromodomain and WD repeat domain containing 3 variant BRWD3-C (BRWD3) mRNA, complete cds, alternatively spliced. ACCESSION AY497048 VERSION AY497048.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6108) AUTHORS Kalla,C., Nentwich,H., Schlotter,M., Mertens,D., Wildenberger,K., Dohner,H., Stilgenbauer,S. and Lichter,P. TITLE Translocation t(X;11)(q13;q23) in B-cell chronic lymphocytic leukemia disrupts two novel genes JOURNAL Genes Chromosomes Cancer 42 (2), 128-143 (2005) PUBMED 15543602 REFERENCE 2 (bases 1 to 6108) AUTHORS Schaffner,C. and Schlotter,M. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) Div. Molecular Genetics (B060), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, Heidelberg D-69120, Germany FEATURES Location/Qualifiers source 1..6108 /db_xref="H-InvDB:HIT000254954" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="X" /map="Xq13" gene 1..6108 /gene="BRWD3" CDS 1499..5695 /gene="BRWD3" /note="transcription factor; alternatively spliced; contains exons 1, 2, 3, 4a, and 12a, but lacks exon 9" /codon_start=1 /product="bromodomain and WD repeat domain containing 3 variant BRWD3-C" /protein_id="AAS45473.1" /translation="MATKMTGNNLPSGEDKITKLKVTMVAWDRYDTTVITAVNNFLLK VWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNIFIWDLDRGTKIRNYFN MIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPL IRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGY VANGDGEVVEQVIGQQTNDQDESILDGIIRELQREQDLRLINEGDVPHLPVNRAYSVN GALRSPNMDISSSPNIRLRRHSSQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNEL NNGVSRVQEECRTAKGDIEISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQRKRQHT YQTRSNIEHNSQASCQNSGVQEDSDSSSEEDETVGTSDASVEDPVVEWQSESSSSDSS SEYSDWTADAGINLQPPKRQTRQTTRKICSSSDEENLKSLEERQKKPKQTRKKKGGLV SIAGEPNEEWFAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNL QKQPWNKMDLREQEFVKIVGIKYEVGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMP DVIDFLVLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYS VHWDNNEREKMSPWDMEPIPEGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRD EECERVIQGINHLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRR ISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAE ERNSTDAEEDTEIVDLDSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLIYE REDSEPFRQPADLLSYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVK ETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNKKSRIYSMMLRLSALFESHIKNIISEY KSAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPKGKQKQMKLQPKNDQNTSVSHARTS SPFSSPVSDAAEGLSLYLLDDEPDGPFSSSSFGGYSRSGNSHDPGKAKSFRNRVLPVK QDHSLDGPLTNGDGREPRTGIKRKLLSASEEDENMGGEDKEKKETKEKSHLSTSESGE LGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHGNGKRNWK TRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRGRGGRGASRGATRAK RARIADDEFDTMFSGRFSRLPRIKTRNQGRRTVLYNDDSDNDNFVSTEDPLNLGTSRS GRVRKMTEKARVSHLMGWNY" misc_feature 1517..1909 /gene="BRWD3" /note="Region: contains three WD40 repeats" misc_feature 3704..4024 /gene="BRWD3" /note="Region: bromo domain" misc_feature 4190..4579 /gene="BRWD3" /note="Region: bromo domain" BASE COUNT 1899 a 1223 c 1425 g 1561 t ORIGIN 1 tctctctctc tctcactcac tcactctctc tctccctctc cctctcctct ccttcctcct 61 ccgcctcctc agctcttggg ctagaatatc tatgggtcga aacgtgatgc gatgaattcg 121 agagagagcg aaactaggac gaggagtgcg gcggaagcgg cgggactccc gggcatgggg 181 gcttcaccac aatagaggca gcgcccccac ccgcccccgc cagcccctcc ggagcgaagc 241 ccccaaaccc cctcgggaaa aggatggcgg cagcacctac ccagatcgaa gccgagctgt 301 attacctgat cgctaggttc ttgcagtctg gaccctgcaa caaatccgct caggtgctag 361 tgcaggagct cgaggagcat cagctgattc cgcgccgctt agattgggag gggaaagagc 421 accgaagaag cttcgaggat ctggtggcag caaatgcaca cattcctcca gactacctcc 481 ttaaaatttg tgagagaatt ggtcctttac tagataaaga gatccctcag agtgttcctg 541 gggtacagac attattaggt gttggtcggc agtctctgct acgggatgcc aaagactgta 601 agagtacact atggaatggg tctgcttttg cggctctgca tagaggcaga cctccagaac 661 tacctgtaaa ttatgtgaaa cctccaaatg tggtgaatat cacctctgcc aggcaattaa 721 ccggctgtag tcgctttggt catattttcc cttcatctgc ttaccagcac attaagatgc 781 ataagagaat tctggggcac ttgtcatctg tctactgtgt agcatttgac cgaagcggga 841 gaagaatttt tacaggttcc gatgactgtt tagtaaaaat ttgggctaca gatgatggac 901 gccttcttgc tacacttcgt ggacactctg ctgaaatttc tgacatggct gttaactatg 961 aaaacactct tattgctgca ggcagctgtg ataaggtagt aagagtatgg tgtcttcgaa 1021 cttgtgcacc cgttgcagtc cttcagggcc attcagcttc tattacttcc atacagagat 1081 cgcccggtga aatttactga gagatccaga cctggagtcc agatatcttg ttcatctttc 1141 agttctggtg gtatgttcat tacaactggt agtactgacc atgtgattag aatatattat 1201 ttgggttctg aggttcctga gaaaattgct gaattagagt cacatacgga taaagttgtt 1261 gctgttcagt tctgtaacaa tggagacaga atgacaagat aatgaaaaat gataatccca 1321 atattgccaa gggttttggg aaaatggaca cttctacaac tcgtgatgag attataaatt 1381 attaaaaaaa cttttcgggg aaacaatttg gcatttaaga tttgttagtg gaagtcgaga 1441 tggaacggca agaatttggc agtatcagca acaagaatgg aagagtatag tgctagacat 1501 ggctactaaa atgactggca ataatttgcc atctggagaa gacaagatca ctaaacttaa 1561 ggtgactatg gtggcctggg atcgctatga taccacagtt attactgcag tgaacaattt 1621 tcttttgaaa gtgtggaatt ctatcacagg acagcttctt catacattat ctggacatga 1681 tgatgaagta ttcgttctag aagcccatcc atttgatcaa aggatcatac tttcagcagg 1741 tcatgatggg aacattttta tttgggacct tgaccggggg accaaaattc ggaattactt 1801 taacatgatt gaaggccaag gccatggtgc ggtgtttgat tgtaaatttt caccagatgg 1861 aaaccatttt gcctgcacag attctcatgg acatttgctg ctttttggtt ttggatgcag 1921 taaatactac gaaaagattc cagatcagat gttcttccac acggattatc gtcctcttat 1981 tcgtgatgcc aataactatg tattggatga acaaacccaa caagctcctc acctcatgcc 2041 tcctccattt ttggtggatg ttgatggaaa tcctcatccc acaaaattcc aacggttggt 2101 accaggacgg gaaaattgta aagatgaaca gcttatacca cagctgggat atgtggctaa 2161 tggtgatggt gaggtagtag aacaggtaat tgggcagcaa accaatgacc aagatgagag 2221 cattcttgat ggaataatca gggagctgca gagagaacaa gacctgagac taattaatga 2281 aggagatgtt ccacatttac cagttaatag agcatactct gttaatggtg ctctgagaag 2341 tccaaacatg gacatatctt cttccccaaa catcaggctt cgaagacata gtagtcaaat 2401 tgaaggtgtt agacaaatgc ataacaatgc tcctcggagc cagatggcca ctgaaagaga 2461 tctcatggcg tggagcagaa gagtggtggt caatgaacta aataatgggg ttagtagggt 2521 acaggaagaa tgtcgaactg caaaaggtga catagaaatc agtctttata cagttgaaaa 2581 gaagaaaaag ccatcttaca ctactcaaag gaatgattat gagcctagct gtgggcgttc 2641 tttacgcagg acacagcgca aacgtcagca tacttaccaa acacggtcca acatagagca 2701 taattcacag gcatcatgtc aaaattcagg tgtacaggaa gactcagaca gttcttcaga 2761 ggaagatgaa actgttggca caagtgacgc ttcggtagag gatcctgttg ttgaatggca 2821 aagtgaaagt tcttccagtg actcatcaag tgaatattct gattggacag cagatgctgg 2881 aataaattta caacccccaa aaagacaaac cagacagaca acacgtaaaa tatgcagcag 2941 ctctgatgag gaaaatttga agtccctaga agaaaggcag aagaaaccta agcagactag 3001 aaagaagaaa ggaggactgg tttctatagc aggtgagcct aatgaagaat ggtttgcccc 3061 tcagtggatc ttggatacta taccccgacg ttccccattt gtcccacaaa tgggagatga 3121 gcttatctat tttaggcaag gacatgaagc ttatgttcgg gctgtaagga aatcgaaaat 3181 atacagtgtt aatttacaaa aacagccatg gaacaaaatg gatctcaggg agcaagagtt 3241 tgttaagatt gtaggaatca aatatgaggt tggcccaccc acactgtgct gcttgaagct 3301 tgcatttctg gacccaattt caggcaaaat gactggagaa tctttttcca ttaagtatca 3361 tgacatgccg gatgtcattg acttccttgt gctacatcag ttttataatg aagccaaaga 3421 aaggaactgg cagattggtg atagattccg cagtataata gatgacgcct ggtggtttgg 3481 gactgtggag agtcagcagc cttttcaacc agagtatcct gatagttctt tccagtgtta 3541 cagtgttcac tgggacaata atgagagaga aaagatgagc ccatgggata tggagccaat 3601 tccagaagga actgcctttc cagatgaagt tggtgctggt gttcctgtct cccaggaaga 3661 attgactgct ttgctataca aaccccagga aggagagtgg ggggctcatt ccagagacga 3721 agaatgtgaa cgggttattc agggcatcaa ccaccttctt tccctggatt ttgccagccc 3781 ttttgctgtt ccagtggatc tcagtgccta ccccttgtat tgtactgtag ttgcttatcc 3841 aactgacctc aataccatca ggcggagact tgaaaatcgc ttttacagga gaatatcagc 3901 attaatgtgg gaggtacgct atattgaaca taatgccagg actttcaatg agccagacag 3961 tcctatagtt aaagcagcta aaattgtaac tgatgtctta cttcgattta ttggggatca 4021 gagctgtact gatatactgg atacttataa taaaattaaa gcagaagaac gaaacagtac 4081 tgatgcagag gaggatacag aaattgttga tttagattca gacggtcctg gtacttcatc 4141 tggaagaagg gtcaaatgcc gaggcagaag acagtcttta aagtgtaatc ctgatgcttg 4201 gaaaaaacaa tgcaaggaac tattgagcct catttatgaa cgtgaagact cggagccatt 4261 tcgacagcca gctgatcttc tttcttaccc aggtcatcag gagcaagagg gagaatcctc 4321 agagtctgtt gttccagaaa gacaacaaga ttcatctctt tctgaggatt atcaagatgt 4381 tatagatact cctgtggact tcagcactgt gaaagaaact ttggaagcag gaaactatgg 4441 tagtcctctg gaattttata aggatgttcg ccaaatattc aacaactcca aagcttatac 4501 ctctaataaa aagtcaagga tctatagcat gatgctgcga ttatctgcct tatttgaaag 4561 tcatatcaaa aatatcatct ctgaatataa gtcagcaatc cagagtcaga agaggagaag 4621 gccacggtac agaaaacgtc taagaagcag cagcagttca ttatctagta gtggagcacc 4681 tagtccaaaa gggaagcaga aacaaatgaa gttgcagcct aaaaatgacc agaatacctc 4741 agtatctcat gccaggacta gctctccttt ctcatctcct gtttcagatg ctgctgaagg 4801 gctttcacta tatctacttg atgatgagcc agatgggcca ttttcttcat cgagcttcgg 4861 tggatatagc cgaagtggaa atagccatga cccagggaaa gccaaatcat ttcggaatag 4921 agttttgcca gttaaacaag atcactccct tgatggaccc cttacaaatg gtgatggcag 4981 agagccccgg acaggaatca agagaaaact acttagtgca tcagaagaag atgaaaacat 5041 gggaggagaa gataaagaga aaaaagaaac aaaagagaaa tctcatttat ccacctcaga 5101 gagtggagag ttaggatcca gtttaagttc tgaaagtacc tgtggttctg actctgactc 5161 tgaatcaact tccagaacag atcaagatta cgtagatgga gaccatgatt atagcaaatt 5221 catacaaacc agacctaaaa gaaaactcag aaagcaacat ggcaatggaa aaagaaattg 5281 gaagaccaga ggcacaggag gaagaggcag atggggaaga tggggtagat ggagtagagg 5341 aggcagagga agaggaggca ggggacgagg gagtcgagga agaggtggag gtggcactag 5401 ggggagggga agagggagag gaggaagagg tgcttctaga ggagctacca gagccaaacg 5461 agcacgtatt gcagatgatg aatttgatac catgttttca ggacgtttca gtagactgcc 5521 tcgaattaaa acaagaaacc aaggcaggag gactgtttta tataatgatg attctgataa 5581 tgacaatttt gtgtccactg aggatcctct gaatcttggt acatccagat caggcagagt 5641 gcgtaaaatg acagaaaaag ccagggttag ccatctcatg ggatggaatt attaacagtt 5701 aataaattta gaataactta aaaaattcaa tggccttcta ctgcagggaa tttaccagga 5761 aatctacaaa gcaagttgtg tggggacttc tgcttccttt cacattggtg cttttccatt 5821 tatgccagta tacatttgtt tcaagacttt tgatctccac acttcatttg ttcaaataag 5881 ccttactcat taggccttaa attaaaagaa attctgccca cacacacaca aacacataca 5941 cacacataca cacacacaga cacacacaca cgaaacacaa cacagacact acagatttac 6001 tacattaaag gagcattcag cttcttaaga gtagcatgac atttttatct caatagaata 6061 gccctctttt gcttttgtat cacagaagta tagcaccttc ttacagag //