LOCUS AY439214 2405 bp mRNA linear HUM 22-MAY-2008
DEFINITION Homo sapiens BNIPXL-beta (BNIPXL) mRNA, complete cds, alternatively
spliced.
ACCESSION AY439214
VERSION AY439214.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2405)
AUTHORS Soh,U.J. and Low,B.C.
TITLE BNIP2 extra long inhibits RhoA and cellular transformation by Lbc
RhoGEF via its BCH domain
JOURNAL J. Cell. Sci. 121 (PT 10), 1739-1749 (2008)
PUBMED 18445682
REFERENCE 2 (bases 1 to 2405)
AUTHORS Soh,J.K.U., Zhou,Y.T. and Low,B.C.
TITLE BNIPXL, an extra long member of the BNIP-2 family
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2405)
AUTHORS Soh,J.K.U., Zhou,Y.T. and Low,B.C.
TITLE Direct Submission
JOURNAL Submitted (16-OCT-2003) Department of Biological Sciences, National
University of Singapore, Blk. S2, 14 Science Drive 4, Singapore
117543, Singapore
FEATURES Location/Qualifiers
source 1..2405
/db_xref="H-InvDB:HIT000254709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="9"
/map="9q21.31"
/tissue_type="brain; kidney"
gene 1..2405
/gene="BNIPXL"
CDS 163..2361
/gene="BNIPXL"
/note="BNIP-2 family; extra long; alternatively spliced"
/codon_start=1
/product="BNIPXL-beta"
/protein_id="AAR15151.1"
/translation="MSKLTLSEGHPETPVDGDLGKQDICSSEASWGDFEYDVMGQNID
EDLLREPEHFLYGGDPPLEEDSLKQSLAPYTPPFDLSYITEPAQSAETIEEAGSPEDE
SLGCRAAEIVLSALPDRRSEGNQAETKNRLPGSQLAVLHIREDPESVYLPVGAGSNIL
SPSNVDWEVETDNSDLPAGGDIGPPNGASKEISELEEEKTIPTKEPEQIKSEYKEERC
TEKNEDRHALHMDYILVNREENSHSKPETCEERESIAELELYVGSKETGLQGTQLASF
PDTCQPASLNERKGLSAEKMSSKSDTRSSFESPAQDQSWMFLGHSEVGDPSLDARDSG
PGWSGKTVEPFSELGLGEGPQLQILEEMKPLESLALEEASGPVSQSQKSKSRGRAGPD
AVTHDNEWEMLSPQPVQKNMIPDTEMEEETEFLELGTRISRPNGLLSEDVGMDIPFEE
GVLSPSAADMRPEPPNSLDLNDTHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEI
DINVDELDTPDEADSFEYTGHEDPTATKDSGQESESIPEYTAEEEREDNRLWRTVVIG
DQEQRIDMKVIEPYRRVISHGGLRGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLF
LYVISTLELMVAEDYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHP
SWFIRTILAVTRPFISSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKY"
misc_feature 1891..2340
/gene="BNIPXL"
/note="Region: sec14p-like lipid-binding domain"
misc_feature 1909..2334
/gene="BNIPXL"
/note="Region: sec14p-like domain"
misc_feature 1960..2355
/gene="BNIPXL"
/note="Bnip2 and Cdc42GAP-like domain; Region: truncated
BCH domain"
BASE COUNT 726 a 517 c 600 g 562 t
ORIGIN
1 gctttgtttg atggtgatcc acatttatcc acagagaatc ctgccttggt tcctgatgct
61 ttgctagcct cagacacttg tctggatata agcgaagctg cctttgacca cagtttcagc
121 gatgcctcag gtctcaacac atccacggga acaatagatg acatgagtaa actgacatta
181 tccgaaggcc atccggaaac gccagttgat ggggacctag ggaagcaaga tatctgctca
241 tctgaagcct cgtggggtga ttttgaatat gatgtaatgg gccagaatat cgatgaagat
301 ttactgagag agcctgaaca cttcctgtat ggtggtgacc ctcctttgga ggaagattct
361 ctgaagcagt cgctggcacc gtacacacct ccctttgatt tgtcttatat cacagaacct
421 gcccagagtg ctgaaacaat agaggaagct gggtctccag aggatgaatc tctgggatgc
481 agagcagcag agatagtgct ttctgcactt cctgatcgaa gaagtgaggg aaaccaggct
541 gagaccaaaa acagactgcc tggatcccag ctggctgtgc tgcatattcg tgaagaccct
601 gagtccgttt atttgccggt aggagcaggc tccaacattt tgtctccatc aaacgttgac
661 tgggaagtag aaacagataa ttctgattta ccagcaggtg gagacatagg accaccaaat
721 ggtgccagca aggaaatatc agaattggaa gaagaaaaaa caattcctac caaagagcct
781 gagcagataa aatcagaata caaggaagaa agatgtacag agaagaatga agatcgtcat
841 gcactacaca tggattacat acttgtaaac cgtgaagaaa attcacactc aaagccagag
901 acctgtgaag aaagagaaag catagctgaa ttagaattgt atgtaggttc caaagaaaca
961 gggctgcagg gaactcagtt agcaagcttc ccagacacat gtcagccagc ctccttaaat
1021 gaaagaaaag gtctctctgc agagaaaatg tcttctaaaa gcgatacgag atcatctttt
1081 gaaagccctg cacaagacca gagttggatg ttcttgggcc atagtgaggt tggtgatcca
1141 tcactggatg ccagggactc agggcctggg tggtccggca agactgtgga gccgttctct
1201 gaactcggct tgggtgaggg tccccagctg cagattctgg aagaaatgaa gcctctagaa
1261 tctttagcac tagaggaagc ctctggtcca gtcagccaat cacagaagag taagagccga
1321 ggcagggctg gcccggatgc agttacccat gacaatgaat gggaaatgct ttcaccacag
1381 cctgttcaga aaaacatgat ccctgacacg gaaatggagg aggagacaga gttccttgag
1441 ctcggaacca ggatatcaag accaaatgga ctactgtcag aggatgtagg aatggacatc
1501 ccctttgaag agggcgtgct gagtcccagt gctgcagaca tgaggcctga acctcctaat
1561 tctctggatc ttaatgacac tcatcctcgg agaatcaagc tcacagcccc aaatatcaat
1621 ctttctctgg accaaagtga aggatctatt ctctctgatg ataacttgga cagcccagat
1681 gaaattgaca tcaatgtgga tgaacttgat acccccgatg aagcagattc ttttgagtac
1741 actggccatg aagatcccac agccaccaaa gattctggcc aagagtcaga gtctattcca
1801 gaatatacgg ccgaagagga acgggaggac aaccggcttt ggaggacagt ggtcattgga
1861 gaccaagagc agcgcattga catgaaggtc atcgagccct acaggagagt catttctcac
1921 ggaggactta gaggatacta tggggacggt ctaaatgcca tcattgtgtt tgccgcctgt
1981 tttctgccag acagcagtcg ggcggattac cactatgtca tggaaaatct tttcctatat
2041 gtaataagta ctttagagtt gatggtagct gaagactata tgattgtgta cttgaatggt
2101 gcaaccccaa gaaggaggat gccagggcta ggctggatga agaaatgcta ccagatgatt
2161 gacagacggt tgaggaagaa tttgaaatca ttcatcattg ttcatccatc ttggttcatc
2221 agaacaatcc ttgctgtgac acgacctttt ataagttcaa aattcagcag taaaattaaa
2281 tatgtcaata gcttatcaga actcagtggg ctgatcccaa tggattgcat ccacattcca
2341 gagagcatca tcaaatattg acttgaagct gaaagaaaag ccttagttgg ccatgctgga
2401 agaag
//