LOCUS AY435145 3969 bp mRNA linear HUM 21-JAN-2004
DEFINITION Homo sapiens I-branching beta-1,6-acetylglucosaminyltransferase
family polypeptide 1 mRNA, complete cds.
ACCESSION AY435145
VERSION AY435145.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3969)
AUTHORS Zhang,T., Haws,P. and Wu,Q.
TITLE Multiple variable first exons: a mechanism for cell- and
tissue-specific gene regulation
JOURNAL Genome Res. 14 (1), 79-89 (2004)
PUBMED 14672974
REFERENCE 2 (bases 1 to 3969)
AUTHORS Zhang,T., Haws,P. and Wu,Q.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2003) Department of Human Genetics, University of
Utah Medical School, Eccles Institute of Human Genetics, 15 North
2030E, Salt Lake City, UT 84112, USA
FEATURES Location/Qualifiers
source 1..3969
/db_xref="H-InvDB:HIT000254684"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 1..1209
/note="IGNT1; a member of the I-branching
beta-1,6-acetylglucosaminyltransferase (IGnT) gene
cluster; the genomic organization of the IGnT gene cluster
is similar to that of the protocadherin gene cluster"
/codon_start=1
/product="I-branching
beta-1,6-acetylglucosaminyltransferase family polypeptide
1"
/protein_id="AAR95646.1"
/translation="MMGSWKHCLFSASLISALIFVFVYNTELWENKRFLRAALSNASL
LAEACHQIFEGKVFYPTENALKTTLDEATCYEYMVRSHYVTETLSEEEAGFPLAYTVT
IHKDFGTFERLFRAIYMPQNVYCVHLDQKATDAFKGAVKQLLSCFPNAFLASKKESVV
YGGISRLQADLNCLEDLVASEVPWKYVINTCGQDFPLKTNREIVQYLKGFKGKNITPG
VLPPDHAVGRTKYVHQELLNHKNSYVIKTTKLKTPPPHDMVIYFGTAYVALTRDFANF
VLQDQLALDLLSWSKDTYSPDEHFWVTLNRIPGVPGSMPNASWTGNLRAIKWSDMEDR
HGGCHGHYVHGICIYGNGDLKWLVNSPSLFANKFELNTYPLTVECLELRHRERTLNQS
ETAIQPSWYF"
BASE COUNT 1140 a 812 c 872 g 1145 t
ORIGIN
1 atgatgggct cttggaagca ctgtcttttt agcgcgtctc ttatctctgc cctgattttt
61 gtatttgttt acaatactga gttatgggag aataaacgtt ttctgagggc agctctgtcc
121 aatgcttcac tgttagcaga agcctgtcat cagatttttg aggggaaagt tttttaccca
181 acagaaaatg cattgaaaac tacccttgat gaagctacct gctatgagta catggttcga
241 agccactatg taacagaaac actctctgaa gaagaggctg ggttcccttt agcttacaca
301 gtgaccatcc acaaagactt cggcactttt gagaggctct tcagggcgat ttatatgccc
361 caaaatgtct actgtgtgca cctggatcag aaggcgacgg atgcctttaa aggtgcagtg
421 aaacagttac tcagctgctt cccaaatgct tttctggctt ccaagaagga gtcggttgtc
481 tatgggggga tctccaggct ccaggctgac ctgaactgcc tggaagacct tgtggcctct
541 gaagttccct ggaagtatgt catcaacacc tgcgggcaag actttcccct gaaaaccaac
601 agggaaatag ttcagtatct gaagggattt aaagggaaaa atatcacccc cggagtgctg
661 cctcctgacc acgctgttgg acggactaaa tacgtccacc aagaactgtt aaaccacaaa
721 aattcctacg tgattaaaac aacaaaatta aaaactcctc ctcctcatga catggtgatt
781 tactttggca cggcctacgt ggctctcaca agggactttg ctaacttcgt cctccaagac
841 cagctcgcac ttgacttact ctcctggtcc aaggacacct acagccccga cgaacatttc
901 tgggtgacac tcaacaggat tcccggtgtt cctggctcta tgccaaatgc atcctggact
961 ggaaacctca gagctataaa gtggagtgac atggaagaca gacacggagg ctgccacggc
1021 cactatgtac atggtatttg tatctatgga aacggagact taaagtggct ggttaattca
1081 ccaagcctgt ttgctaacaa gtttgagctt aatacctacc cccttactgt ggaatgccta
1141 gaactgaggc atcgcgaaag aaccctcaat cagagtgaaa ctgcgataca acccagctgg
1201 tatttttgag ctattcatga gctactcatg actgaaggga aactgcagct gggaagagga
1261 gcctgttttt gtgagagact tttgccttcg taatgttaac cgtttcagga ccacgtttat
1321 agcttcagga cctggctacg taattatact taaaatatcc actggacact gtgaaataca
1381 ctaacaggat ggctgggtag agcaatctgg gcactttggc caattttagt cttgctgttt
1441 cttgatgctc acctctatat tagtttattg ttaggatcaa tgataaattt aaatgacctc
1501 agatctttgc accagatact catcatatac aaatgtttta gtaaaaaaga gaattgtaga
1561 taatactgtc taggaaaata agaattaggt ttctttgaag aaggaatctt ttataacacc
1621 ttaacagtca ccactgtgct caaccagaca gatagtgaaa cagctttctg ggtaattcac
1681 caatttcctt taaaacataa gctacctgaa tggagaatac atcttgtttc tgagtttcaa
1741 cactagcatt tttggcttac tcatggacaa agttctgtat atagtataaa gtcattaaca
1801 agaaacagga tatgctttaa gacagaattc actgtctgtt gcttcagtaa aaggacctcg
1861 gggaataaaa catttctctc ttatatgcca gaatgtaggc tggtccctat gtcatgtctt
1921 ccattaagaa cactaaaaag tccttgcaag aatggagata tgcattcaag agaggtgcta
1981 tcacatagat ctagtctgaa gtctggaaca ctttcctctt ctatgacccc tctctcccca
2041 gtattatctt acttgcaaaa tggagaccaa attctatcct gtgaggcttt taattgcacc
2101 atagtatgct ctgagtagct ttacactgcc tggtactgat agtagtggct cgatttttaa
2161 gagccttcaa ttgtagatga acatctctgt tatttatccc tcattcatcc atccgttcat
2221 tcattcagcc ttcaatcaac atctcttgag tgtctattat gtacaggaca tgtactgaga
2281 caaaaaggaa acataagagc tttttcactc taaaaatctt ggcaataatg tcaacaccag
2341 aaagcctcct ctggagaatc ttacagagtg attgtagttt aatacaggaa cacacagggc
2401 tgtgtagcat gataccaggc ccaggagatc agtaattaca aattaagggt taaatcagag
2461 attattcaac agagagggag aaaggaggag acagagggag gacctgttgt gttccagcca
2521 ttctggtatt cctttatgta tctaatttca ttcaaacctc acaacagtct tgtgaggccc
2581 ttatataatt actcccattt tgcagatgaa gtaactgagg cttagaaagg ttaatagcac
2641 cggggaacaa tttctctggg tgagaattgg gactctgttg ctggtcttct cagttcattt
2701 cctgaggtgg atttactgag agaaggtgaa ataaagccat atttagtata ccagagaagg
2761 tagattttaa gaatggtctc agtgttaata ctgagaaaaa gtcctgtcag ttcagaaaaa
2821 atgtgaagtc tactttagta ttcctgtaat actaaaccgt tgagtttcta aatatttatt
2881 tattctaaca aaaagcaatt actacaaatg gatgacacat ttaatgaaca caattttatt
2941 ttttttctgt aactgtgctt gttgaatgtc aatcatattt aaagggaatg actttgaagt
3001 aaaacctttt ttcttgctac tgaaaaaaat ggagttgttt tgggtggtaa agtgttaagg
3061 aatagggaca gctggtcaca caaggaactc ttgaaggcca catgtgaaaa cctgtcactt
3121 gcacagaggc cagtcccact aaggtgacca gagtgggctc caagcacaaa ctgccattgg
3181 ctatagatgg gactgtgtcc ccccaaaatt catgtgttgg agccttaacc ctcaatgtga
3241 tggtatttga gatggggcct ttggtaaggg aagtttagat gaggtcacga gggtaggacc
3301 ctcatgatgg gatgagtccc cttacaagac ctctggcttg ggccgggcgt ggtggctcac
3361 acctgtaatc ccaacacttt gggaggccaa ggcaggtaga tcacttgatg ccaggagttc
3421 cagaccaggc tggccgacat ggtgaaaccc catctctact aaaaaatata aaaattagcc
3481 gggctttgtg gcatgtgcct gtaatcccag ctatttggca ggctgaggca tgagaatcgc
3541 ttgaacccag gaggtggagg ttacagtgag ctgagagtgc cccactgcac tccagcctgg
3601 gtgacagagc gagactttgt cccaaaacaa aataggtgag gggatagcga atgcactcag
3661 ggtcagcagt ggagtttaaa aattgtctct tttcaactta tttaaatgac agcacctgag
3721 aagaggaacc gttttacact ggatgtttct catgtagaac aagaaatctt tctggaattg
3781 atgtttacat gtctgttgtt ggtcatctct cctgtgtctt aaatacttta atgttggaag
3841 agcatagtgt ttgggctagt gggtttctga cagcccatgg gaatgccctg aaactactgt
3901 atctgatgtt tgttttcgat gaggttccat gttttgtttt cttgggaata aattaatata
3961 ttgttttcc
//