LOCUS AY356353 1402 bp mRNA linear HUM 25-JUL-2016
DEFINITION Homo sapiens cajalin 2 mRNA, partial cds.
ACCESSION AY356353
VERSION AY356353.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1402)
AUTHORS Xu,H. and Hebert,M.D.
TITLE A novel EB-1/AIDA-1 isoform, AIDA-1c, interacts with the Cajal body
protein coilin
JOURNAL BMC Cell Biol. 6 (1), 23 (2005)
PUBMED 15862129
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 1402)
AUTHORS Hebert,M.D. and Matera,A.G.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2003) Biochemistry, University of Mississippi
Medical Center, 2500 North State Street, Jackson, MS 39216, USA
FEATURES Location/Qualifiers
source 1..1402
/db_xref="H-InvDB:HIT000252115"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="12"
CDS <1..1101
/note="coilin associated protein; localized in the Cajal
body; contains phosphotyrosine binding domain; interacts
with the Cajal body marker protein, coilin as well as
SmB'; may be isoform of EB-1 gene; similar to accession
numbers AF145204 and NM_152788"
/codon_start=1
/product="cajalin 2"
/protein_id="AAQ56189.1"
/translation="GERRFKPHVCVLGGQSPPALADPGSRPARAARVLKINLIGHRKR
ILASLGDRLHDDPPQKPPRSITLREPSGNHTPPQLSPSLSQSTYTTGGSLDVPHIIMQ
GDARRRRNENYFDDIPRSKLERQMAQTGDWGEPSITLRPPNEATASTPVQYWQHHPEK
LIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMKKVPTIILSVSYK
GVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYCHVFTAFDVNL
AYEIILTLGQAFEVAYQLALQARKGGHSSTLPESFENKPSKPIPKPRVSIRKSVQIDP
SEQKTLANLPWIVEPGQEAKRGINTKYETTIF"
BASE COUNT 367 a 402 c 321 g 312 t
ORIGIN
1 ggggagcgga ggttcaagcc acatgtctgc gtcctcgggg gccagagccc gccagccctc
61 gcggatcccg gctcgcggcc agcccgagcg gctcgggttt taaaaatcaa tttgattggc
121 cacaggaaac gtattttggc atctctggga gacaggctgc acgacgatcc cccacagaag
181 ccccctcggt ccatcaccct cagggaaccc agtggtaatc acactcctcc tcagttgtct
241 ccatcactta gccaaagcac ttacaccact ggtggctccc tagacgttcc tcacattatc
301 atgcagggcg atgcaaggag gagaagaaat gaaaactact ttgatgatat tccccgatca
361 aaactggaga ggcagatggc tcaaacagga gactggggag aaccttccat taccttgcga
421 cctccgaatg aagccacagc ctctaccccg gtacagtact ggcagcatca cccagaaaag
481 cttatcttcc agtcgtgtga ttacaaagct ttttatttag gttctatgct gataaaagag
541 cttaggggga cagaatcaac ccaagatgct tgtgcaaaaa tgcgggctaa ctgtcagaag
601 tctacagagc aaatgaagaa ggtccctact attattcttt ctgtctcata taaaggagtc
661 aaatttattg atgcaacaaa taagaacata attgctgagc atgaaattcg taatatctcc
721 tgtgctgccc aggacccaga agacctctca acatttgcct atatcacaaa agatttgaag
781 tctaatcacc actactgtca tgtgtttact gcctttgatg tgaatttagc ctatgaaatc
841 atcctaaccc tgggacaggc attcgaagtc gcttaccagc tagcactaca agcaagaaaa
901 gggggacact cctccacact tccagaaagc tttgaaaaca aaccctccaa acccatcccc
961 aagccccgcg ttagcattcg caagtccgtg cagatcgacc catctgagca aaagactctg
1021 gccaatctac cgtggattgt ggagccgggc caagaagcca agaggggcat taataccaag
1081 tatgaaacca cgattttctg atactcgccg tcctcctgtc ctcgcggtgc cttgctcgcc
1141 aagcggtccc ggagcaggct ttccttcgcg cctccgcgtc cacccagccc aggaggaaga
1201 ctgctctgag cgtgcggcct tgttacgggc gaaaggccac tggccattcc tggggaagtt
1261 ctttctgcac cagtgatgga aaacgcaaga ctttccagtc gcaacccctg agaggcgtga
1321 gttgagatgg gttttccctg atgctcccga ctcccctccc caccacctcc caaggtattt
1381 ctgatgactc cgccccagta ct
//