LOCUS AY309009 2601 bp mRNA linear HUM 05-JUN-2005
DEFINITION Homo sapiens mu opioid receptor splice variant hMOR-1Y (OPRM1)
mRNA, complete cds, alternatively spliced.
ACCESSION AY309009
VERSION AY309009.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2601)
AUTHORS Pan,L., Xu,J., Yu,R., Xu,M.M., Pan,Y.X. and Pasternak,G.W.
TITLE Identification and characterization of six new alternatively
spliced variants of the human mu opioid receptor gene, Oprm
JOURNAL Neuroscience 133 (1), 209-220 (2005)
PUBMED 15893644
REFERENCE 2 (bases 1 to 2601)
AUTHORS Pan,L., Xu,J., Pasternak,G.W. and Pan,Y.-X.
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2003) Neurology, Memorial Sloan-Kettering Cancer
Center, 1275 York Ave., New York, NY 10021, USA
FEATURES Location/Qualifiers
source 1..2601
/db_xref="H-InvDB:HIT000331767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6q24-q25"
gene 1..2601
/gene="OPRM1"
CDS 51..1259
/gene="OPRM1"
/note="contains alternative exon 4; alternatively spliced"
/codon_start=1
/product="mu opioid receptor splice variant hMOR-1Y"
/protein_id="AAQ77393.1"
/translation="MDSSAAPTNASNCTDALAYSSCSPAPSPGSWVNLSHLDGNLSDP
CGPNRTDLGGRDSLCPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMK
TATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTL
CTMSVDRYIAVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGSID
CTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRN
LRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLN
PVLYAFLDENFKRCFREFCIPTSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQIRDP
ISNLPRVSVF"
BASE COUNT 734 a 669 c 528 g 670 t
ORIGIN
1 cggtgctcct ggctacctcg cacagcggtg cccgcccggc cgtcagtacc atggacagca
61 gcgctgcccc cacgaacgcc agcaattgca ctgatgcctt ggcgtactca agttgctccc
121 cagcacccag ccccggttcc tgggtcaact tgtcccactt agatggcaac ctgtccgacc
181 catgcggtcc gaaccgcacc gacctgggcg ggagagacag cctgtgccct ccgaccggca
241 gtccctccat gatcacggcc atcacgatca tggccctcta ctccatcgtg tgcgtggtgg
301 ggctcttcgg aaacttcctg gtcatgtatg tgattgtcag atacaccaag atgaagactg
361 ccaccaacat ctacattttc aaccttgctc tggcagatgc cttagccacc agtaccctgc
421 ccttccagag tgtgaattac ctaatgggaa catggccatt tggaaccatc ctttgcaaga
481 tagtgatctc catagattac tataacatgt tcaccagcat attcaccctc tgcaccatga
541 gtgttgatcg atacattgca gtctgccacc ctgtcaaggc cttagatttc cgtactcccc
601 gaaatgccaa aattatcaat gtctgcaact ggatcctctc ttcagccatt ggtcttcctg
661 taatgttcat ggctacaaca aaatacaggc aaggttccat agattgtaca ctaacattct
721 ctcatccaac ctggtactgg gaaaacctgc tgaagatctg tgttttcatc ttcgccttca
781 ttatgccagt gctcatcatt accgtgtgct atggactgat gatcttgcgc ctcaagagtg
841 tccgcatgct ctctggctcc aaagaaaagg acaggaatct tcgaaggatc accaggatgg
901 tgctggtggt ggtggctgtg ttcatcgtct gctggactcc cattcacatt tacgtcatca
961 ttaaagcctt ggttacaatc ccagaaacta cgttccagac tgtttcttgg cacttctgca
1021 ttgctctagg ttacacaaac agctgcctca acccagtcct ttatgcattt ctggatgaaa
1081 acttcaaacg atgcttcaga gagttctgta tcccaacctc ttccaacatt gagcaacaaa
1141 actccactcg aattcgtcag aacactagag accacccctc cacggccaat acagtggata
1201 gaactaatca tcagatcaga gatccaatat caaaccttcc cagggtgtct gtattctgac
1261 aactgtccac tgaggcaatt tccatacagc gcaaagtgga gtggcgattt ggcagttatc
1321 aagggacctc cagccaagtt tgttgctgac caacttgccg ggtcgtcttg aaaagggggc
1381 ttacaggtgt tccaagcccg tgttttatcc tgaagtatcc ctcaacacag aaaaacgacc
1441 tcataacaca aaatacacca gcttaaaaat agcctttgaa ttatttttca cattaatcaa
1501 aactttacag aggagataaa cactgatttt ttattttatt ttattttatt ttattttatt
1561 ttattgccat tcattcaacc gtttgcacag agagaaagaa gacagaaatc tgactggtaa
1621 gaaattgtta cccttttgcc agcatgccag gcttctgggt tccctttccc tgagcggccc
1681 tagtgatccg gcttgcggca ccatcgccta cgggccaagc tgcatcataa aggaaatttt
1741 ttttttttca ttctggccag agcaaaacac atgtgataaa acataggcat tagctactct
1801 gcttagcacc aaatatcaga ctagcttaaa tttgccccca gatgggttcc atcatcttta
1861 atccgacctc tgacttgcag ttttcaccac gtgctctctg gcaaaacagt tgccctgagt
1921 aacagaaaag ataggaaagg aaaaggagag agagaaaaac gtgccagtgg aaggggtggg
1981 gaaggtgaaa tgatcaagga ggccagagaa agactcacct attgcagcaa cactgtagaa
2041 gttcaggcag ctgcttctcg gtagcaaaag gatcttttcc ggcaatccta ttagctctca
2101 agtttcccct tttagggagg aaaaagctcc ccatgtcccg cgatcctgta catgtccaac
2161 cctgccatcc acagccatca gcaaagagtg caagacagat taatccaaag agaatagcaa
2221 ttaatatccc atagcatcaa agctgttctt agccaagagg gactttaacg agaggggtct
2281 ctaacaccct aaatcttaga agagacccta accatcctaa gtagggcctc taaccccgct
2341 ttataaactt ttaattgact cccatcttaa cagttgcaat ccatggagga atgcttgata
2401 acctcggtga taagataaaa aaccaagcat actagaagtg ttctctaaaa ttaaaaatac
2461 agtagttgct agagaaaaat tttagtccaa aaatccaact atagaaacat agaatgtgag
2521 aggtagcaca taagaaataa gtcatgggga ttttatttca tggaccagca atatgatgat
2581 aaaagccatc taaccaaggg c
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