LOCUS AY304584 3335 bp mRNA linear HUM 08-JUL-2009 DEFINITION Homo sapiens TIRAP3b (TIRAP3) mRNA, complete cds. ACCESSION AY304584 VERSION AY304584.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3335) AUTHORS Palsson-McDermott,E.M., Doyle,S.L., McGettrick,A.F., Hardy,M., Husebye,H., Banahan,K., Gong,M., Golenbock,D., Espevik,T. and O'Neill,L.A. TITLE TAG, a splice variant of the adaptor TRAM, negatively regulates the adaptor MyD88-independent TLR4 pathway JOURNAL Nat. Immunol. 10 (6), 579-586 (2009) PUBMED 19412184 REFERENCE 2 (bases 1 to 3335) AUTHORS Hardy,M.P., McGettrick,A.F., Ejdeback,M. and O'Neill,L.A.J. TITLE Identification of a novel variant of the Toll-like receptor adaptor protein TIRAP3 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3335) AUTHORS Hardy,M.P., McGettrick,A.F. and O'Neill,L.A.J. TITLE Direct Submission JOURNAL Submitted (23-MAY-2003) Biochemistry, Trinity College Dublin, College Green, Dublin 2, Ireland FEATURES Location/Qualifiers source 1..3335 /db_xref="H-InvDB:HIT000251567" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q22" gene 1..3335 /gene="TIRAP3" 5'UTR 1..222 /gene="TIRAP3" CDS 223..1437 /gene="TIRAP3" /note="adaptor; membrane-anchored isoform" /codon_start=1 /product="TIRAP3b" /protein_id="AAQ97433.1" /translation="MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDN AKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASK NGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKS VIDYQTHFRLREAQGRSRAEDLNTRVAYWHSVDTSPGYHESDSKKSEDLSLCNVAEHS NTTEGPTGKQEGAQSVEEMFEEEAEEEVFLKFVILHAEDDTDEALRVQNLLQDDFGIK PGIIFAEMPCGRQHLQNLDDAVNGSAWTILLLTENFLRDTWCNFQFYTSLMNSVNRQH KYNSVIPMRPLNNPLPRERTPFALQTINALEEESRGFPTQVERIFQESVYKTQQTIWK ETRNMVQRQFIA" 3'UTR 1438..3335 /gene="TIRAP3" regulatory 1526..1531 /regulatory_class="polyA_signal_sequence" /gene="TIRAP3" regulatory 3246..3251 /regulatory_class="polyA_signal_sequence" /gene="TIRAP3" BASE COUNT 955 a 690 c 711 g 979 t ORIGIN 1 aggccttttc cgcttctctt ttacctcccc aggtccgccc gtctgcgccc ctcacaggaa 61 gccggagggt cgctctgatc ccgaatctcc cacaggcgtg aacctgctct gctgtgtatc 121 tttgcggggt ggcctgcgct gaggcctgcc gcgcgcggtg agtccgcgca gacctgaccc 181 tgcgtctcgc agctcggttg aggccgccgc cgccttctcg ggatgccgcg gccggggtcc 241 gcgcagcgct gggcggccgt cgcgggccgt tgggggtgca ggctgctcgc actgctgcta 301 ctggtgcctg gacccggcgg cgcctctgag atcaccttcg agcttcctga caacgccaag 361 cagtgcttct acgaggacat cgctcagggc accaagtgca ccctggagtt ccaggtgatt 421 actggtggtc actatgatgt agattgtcga ttagaagatc ctgatggtaa agtgttatac 481 aaagagatga agaaacagta tgatagtttt accttcacag cctccaaaaa tgggacatac 541 aaattttgct tcagcaatga attttctact ttcacacata aaactgtata ttttgatttt 601 caagttggag aagacccacc tttgtttcct agtgagaacc gagtcagtgc tcttacccag 661 atggaatctg cctgtgtttc aattcacgaa gctctgaagt ctgtcatcga ttatcagact 721 catttccgtt taagagaagc tcaaggccga agccgagcag aggatctaaa tacaagagtg 781 gcctattggc acagtgtgga tacaagtcca ggatatcatg agtcagattc caagaagtct 841 gaagatctat ccttgtgtaa tgttgctgag cacagcaata caacagaggg gccaacagga 901 aagcaggagg gagctcagag cgtggaagag atgtttgaag aagaagctga agaagaggtg 961 ttcctcaaat ttgtgatatt gcatgcagaa gatgacacag atgaagccct cagagtccag 1021 aatctgctac aagatgactt tggtatcaaa cccggaataa tctttgctga gatgccatgt 1081 ggcagacagc atttacagaa tttagatgat gctgtaaatg ggtctgcatg gacaatctta 1141 ttactgactg aaaacttttt aagagatact tggtgtaatt tccagttcta tacgtcccta 1201 atgaactccg ttaacaggca gcataaatac aactctgtta tacccatgcg gcccctgaac 1261 aatccccttc cccgagaaag gactcccttt gccctccaaa ccatcaatgc cttagaggaa 1321 gaaagtcgtg gatttcctac acaagtagaa agaatttttc aggagtctgt gtataagaca 1381 caacaaacta tatggaaaga gacaagaaat atggtacaaa gacaatttat tgcctgagat 1441 gaaacatata acatgtggct ggctcttgtt ttgtaaacca aatgattaat cttcacttga 1501 gaaagcagtt tctaggaaat gtttaaataa aagagagtct tcaccttaaa gaaacctatg 1561 gagcacaaga aagataaatt tctgcaggac agcctataaa attgtggtac tttttgatgt 1621 ttcagtaaac ttgacattgt cagagtttca aggacttttc tttcacaatt ttcctagttc 1681 atggatatga aaaaggaatt ctcaatccat attccttgta ttgaaccttg aacaaaaact 1741 tgtatgacag acatttttaa aaatgtgaca acacttttat tctctgaatt ttgatctcaa 1801 aggacacaga aaaaaaatgg ccccaggaga tctgatcaca cttcctcctg aggcacctct 1861 catggatgtt gcaataagca ttcgggtact atcacccaga aatatgaatt gccagaatag 1921 aacatttagc atgttaagcg ttgatgcata taaaatcaga aatagatgtg agaatggtgg 1981 aactttttaa aagaacccag tcaaatgtat tttctgctga aatctgcata tttggaggca 2041 tttcccacca ccgattcaca gcccatttga tagtgtggta gttagggact tcgtggagtg 2101 gtgttcagac gtcccctggg gcttaaatct cttcatatta gtcatcattt gtaactatgg 2161 ctttatttgc agagcttcta aaaggcgtat aactgtgtga gtggccagat attcactttt 2221 taaatcaaaa acctctctta tggaagcttt aaaagtttcc gtcacacaca attctcttct 2281 caggaagtat ttctcattta ggtcttcaaa gtagcctgac tgtgtgcatg tgtgtgtgtg 2341 ataggttatt tataaagact ttggatagaa ggagatgtat tttattacct cctattctag 2401 agccccatgc tcctaacaag ccagagaggc cccaaacagg attgtttctt tcctccacag 2461 cccttctgcc catctgagat tgagggagca tcgtccactt gagatcaggg atggggtgga 2521 gaatgggtca tgtcatgtaa tgagaaaagc cctcttcggg atcatgagac ttggttctag 2581 tccaatttct gccactgagg atgaatgtaa ctgtgggcaa actatttacc ctcctttatc 2641 tgtgaaatga aagggttgaa ttgatggatc tctaaaggct tttgtcctct atgaggatgt 2701 gaaaaactag ggaccacaaa agggaacaag caaaaaagtt tggattcgat aaagtgatat 2761 gtaatagttg cagaaggctt tatatatgct tataatgaaa agatattttt tgtatattga 2821 cagcataatt tatttttaat gctgtcatta cacttaaagt cacaggaaaa aaatatacat 2881 gcttactcag gctttcttaa aaataaattt ttatagagat ccttgagtaa agacattttg 2941 cttaatttct tttttcttat tccccacttg tatatcccct accagtaccg ggatctgcac 3001 acatcttttt gcagttacct cttcatagcc atgaaccaaa acgttctatg aggagcatgc 3061 aagtaagtca agcctcctat tctgttagta cttattagag gaggagatgg ttttcattgc 3121 atagtgacat tttcttagcc ttaacgttct gatagtagct tactactcac ttctcttttt 3181 cagttttcat aataagtatt catttttttg ccataatgct tcctgtaaag ccaattttat 3241 atactaataa aacatgaact gcccactctt catgcctgcc aaacttgggg caattgatgc 3301 taaatggtat ttttaaaata aatgttttta ttctt //