LOCUS AY198415 4675 bp mRNA linear HUM 11-AUG-2003
DEFINITION Homo sapiens PR domain-containing protein 1 beta (PRDM1) mRNA,
complete cds.
ACCESSION AY198415
VERSION AY198415.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4675)
AUTHORS Gyory,I., Fejer,G., Ghosh,N., Seto,E. and Wright,K.L.
TITLE Identification of a functionally impaired positive regulatory
domain I binding factor 1 transcription repressor in myeloma cell
lines
JOURNAL J. Immunol. 170 (6), 3125-3133 (2003)
PUBMED 12626569
REFERENCE 2 (bases 1 to 4675)
AUTHORS Gyory,I. and Wright,K.L.
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2002) Department of Interdisciplinary Oncology,
H. Lee Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL
33612, USA
FEATURES Location/Qualifiers
source 1..4675
/db_xref="H-InvDB:HIT000085223"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6q21-q22.1"
gene 1..4675
/gene="PRDM1"
CDS 147..2222
/gene="PRDM1"
/note="PRDI-BF1 beta; contains ZNF domain"
/codon_start=1
/product="PR domain-containing protein 1 beta"
/protein_id="AAO45624.1"
/translation="MEKIYSRGELHHFIDGFNEEKSNWMRYVNPAHSPREQNLAACQN
GMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSSLKQPSTEKN
ELCPKNVPKREYSVKEILKLDSNPSKGKDLYRSNISPLTSEKDLDDFRRRGSPEMPFY
PRVVYPIRAPLPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSP
HSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLGSYPGYAPLPHLPPAFIPSYNAHY
PKFLLPPYGMNCNGLSAVSSMNGINNFGLFPRLCPVYSNLLGGGSLPHPMLNPTSLPS
SLPSDGARRLLQPEHPREVLVPAPHSAFSFTGAAASMKDKACSPTSGSPTAGTAATAE
HVVQPKATSAAMAAPSSDEAMNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTF
GQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSS
TSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCSQCHKNYIHLC
SLKVHLKGNCAAAPAPGLPLEDLTRINEEIEKFDISDNADRLEDVEDDISVISVVEKE
ILAVVRKEKEETGLKVSLQRNMGNGLLSSGCSLYESSDLPLMKLPPSNPLPLVPVKVK
QETVEPMDP"
BASE COUNT 1338 a 1139 c 925 g 1273 t
ORIGIN
1 cagtagcatc gcccatttgc cattcactgc agtagcaaaa gtagtactct gtggtgggtt
61 aatcggtttg aggcagctcc ttaaatgaac atttgtgttt catttttctg ttattttccc
121 gaacatgaaa agacgataaa actgaaatgg aaaagatcta ttccagaggg gagcttcacc
181 acttcattga cggctttaat gaagagaaaa gcaactggat gcgctatgtg aatccagcac
241 actctccccg ggagcaaaac ctggctgcgt gtcagaacgg gatgaacatc tacttctaca
301 ccattaagcc catccctgcc aaccaggaac ttcttgtgtg gtattgtcgg gactttgcag
361 aaaggcttca ctacccttat cccggagagc tgacaatgat gaatctcaca caaacacaga
421 gcagtctaaa gcaaccgagc actgagaaaa atgaactctg cccaaagaat gtcccaaaga
481 gagagtacag cgtgaaagaa atcctaaaat tggactccaa cccctccaaa ggaaaggacc
541 tctaccgttc taacatttca cccctcacat cagaaaagga cctcgatgac tttagaagac
601 gtgggagccc cgaaatgccc ttctaccctc gggtcgttta ccccatccgg gcccctctgc
661 cagaagactt tttgaaagct tccctggcct acgggatcga gagacccacg tacatcactc
721 gctcccccat tccatcctcc accactccaa gcccctctgc aagaagcagc cccgaccaaa
781 gcctcaagag ctccagccct cacagcagcc ctgggaatac ggtgtcccct gtgggccccg
841 gctctcaaga gcaccgggac tcctacgctt acttgaacgc gtcctacggc acggaaggtt
901 tgggctccta ccctggctac gcacccctgc cccacctccc gccagctttc atcccctcgt
961 acaacgctca ctaccccaag ttcctcttgc ccccctacgg catgaattgt aatggcctga
1021 gcgctgtgag cagcatgaat ggcatcaaca actttggcct cttcccgagg ctgtgccctg
1081 tctacagcaa tctcctcggt gggggcagcc tgccccaccc catgctcaac cccacttctc
1141 tcccgagctc gctgccctca gatggagccc ggaggttgct ccagccggag catcccaggg
1201 aggtgcttgt cccggcgccc cacagtgcct tctcctttac cggggccgcc gccagcatga
1261 aggacaaggc ctgtagcccc acaagcgggt ctcccacggc gggaacagcc gccacggcag
1321 aacatgtggt gcagcccaaa gctacctcag cagcgatggc agcccccagc agcgacgaag
1381 ccatgaatct cattaaaaac aaaagaaaca tgaccggcta caagaccctt ccctacccgc
1441 tgaagaagca gaacggcaag atcaagtacg aatgcaacgt ttgcgccaag actttcggcc
1501 agctctccaa tctgaaggtc cacctgagag tgcacagtgg agaacggcct ttcaaatgtc
1561 agacttgcaa caagggcttt actcagctcg cccacctgca gaaacactac ctggtacaca
1621 cgggagaaaa gccacatgaa tgccaggtct gccacaagag atttagcagc accagcaatc
1681 tcaagaccca cctgcgactc cattctggag agaaaccata ccaatgcaag gtgtgccctg
1741 ccaagttcac ccagtttgtg cacctgaaac tgcacaagcg tctgcacacc cgggagcggc
1801 cccacaagtg ctcccagtgc cacaagaact acatccatct ctgtagcctc aaggttcacc
1861 tgaaagggaa ctgcgctgcg gccccggcgc ctgggctgcc cttggaagat ctgacccgaa
1921 tcaatgaaga aatcgagaag tttgacatca gtgacaatgc tgaccggctc gaggacgtgg
1981 aggatgacat cagtgtgatc tctgtagtgg agaaggaaat tctggccgtg gtcagaaaag
2041 agaaagaaga aactggcctg aaagtgtctt tgcaaagaaa catggggaat ggactcctct
2101 cctcagggtg cagcctttat gagtcatcag atctacccct catgaagttg cctcccagca
2161 acccactacc tctggtacct gtaaaggtca aacaagaaac agttgaacca atggatcctt
2221 aagattttca gaaaacactt attttgtttc ttaagttatg acttggtgag tcagggtgcc
2281 tgtaggaagt ggcttgtaca taatcccagc tctgcaaagc tctctcgaca gcaaatggtt
2341 tcccctcacc tctggaatta aagaaggaac tccaaagtta ctgaaatctc agggcatgaa
2401 caaggcaaag gccatatata tatatatata tatatctgta tacatattat atatacttat
2461 ttacacctgt gtctatatat ttgcccctgt gtattttgaa tatttgtgtg gacatgtttg
2521 catagccttc ccattactaa gactattacc tagtcataat tattttttca atgataatcc
2581 ttcataattt attatacaat ttatcattca gaaagcaata attaaaaaag tttacaatga
2641 ctggaaagat tccttgtaat ttgagtataa atgtattttt gtcttgtggc cattctttgt
2701 agataatttc tgcacatctg tataagtacc taagatttag ttaaacaaat atatgacttc
2761 agtcaacctc tctctctaat aatggtttga aaatgaggtt tgggtaattg ccaatgttgg
2821 acagttgatg tgttcattcc tgggatccta tcatttgaac agcattgtac ataacttggg
2881 ggtatgtgtg caggattacc caagaataac ttaagtagaa gaaacaagaa agggaatctt
2941 gtatattttt gttgatagtt catgtttttc ccccagccac aattttaccg gaagggtgac
3001 aggaaggctt taccaacctg tctctccctc caaaagagca gaatcctccc accgccctgc
3061 cctccccacc gagtcctgtg gccattcaga gcggccacat gacttttgca tccattgtat
3121 tatcagaaaa tgtgaagaag aaaaaaatgc catgttttaa aaccactgcg aaaatttccc
3181 caaagcatag gtggctttgt gtgtgtgcga tttgggggct tgagtctggg tggtgttttg
3241 ttgttggttt ttgttgcttt tttttttttt ttttttttaa tgtcaaaatt gcacaaacat
3301 ggtgctctac caggaaggat tcgaggtaga taggctcagg ccacacttta aaaacaaaca
3361 cacaaacaac aaaaaacggg tattctagtc atcttggggt aaaagcgggt aatgaacatt
3421 cctatcccca acacatcaat tgtatttttt ctgtaaaact cagattttcc tcagtatttg
3481 tgtttttaca ttttatggtt aatttaatgg aagatgaaag ggcattgcaa agttgttcaa
3541 caacagttac ctcattgagt gtgtccagta gtgcaggaaa tgatgtctta tctaatgatt
3601 tgcttctcta gaggagaaac cgagtaaatg tgctccagca agatagactt tgtgttattc
3661 tatcttttat tctgctaagc ccaaagatta catgttggtg ttcaaagtgt agcaaaaaat
3721 gatgtatatt tataaatcta tttataccac tatatcatat gtatatatat ttataaccac
3781 ttaaattgtg agccaagcca tgtaaaagat ctactttttc taagggcaaa aaaaaaaaaa
3841 aaaaaaaaag aacactcctt tctgagactt tgcttaatac ttggtgacct cacaatcacg
3901 tcggtatgat tgggcaccct tgcctactgt aagagaccct aaaaccttgg tgcagtggtg
3961 gggaccacaa aacaaccagg gaggaagaga tacatcattt tttagtatta aggaccatct
4021 aagacagctc tatttttttt ttgccacttt atgattatgt ggtcacaccc aagtcacaga
4081 aataaaaaac tgactttacc gctgcaattt ttctgttttc ctccttacta aatactgata
4141 cattactcca atctatttta taattatatt tgacattttg ttcacatcaa ctaatgttca
4201 cctgtagaag agaacaaatt tcgaataatc cagggaaacc caagagcctt actggtcttc
4261 tgtaacttcc aagactgaca gctttttatg tatcagtgtt tgataaacac agtccttaac
4321 tgaaggtaaa ccaaagcatc acgttgacat tagaccaaat acttttgatt cccaactact
4381 cgtttgttct ttttctcctt ttgtgctttc ccatagtgag aatttttata aagacttctt
4441 gcttctctca ccatccatcc ttctcttttc tgcctcttac atgtgaatgt tgagcccaca
4501 atcaacagtg gttttatttt ttcctctact caaagttaaa actgaccaaa gttactggct
4561 ttttactttg ctagaacaac aaactatctt atgtttacat actggtttac aatgttattt
4621 atgtgcaaat tgtcaaaatg taaattaaat ataaatgttc atgctttacc aaaat
//