LOCUS AY161136 6018 bp mRNA linear HUM 14-JUL-2003
DEFINITION Homo sapiens SNF2 histone linker PHD RING helicase (SHPRH) gene,
complete cds.
ACCESSION AY161136
VERSION AY161136.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6018)
AUTHORS Sood,R., Makalowska,I., Galdzicki,M., Hu,P., Eddings,E.,
Robbins,C.M., Moses,T., Namkoong,J., Chen,S. and Trent,J.M.
TITLE Cloning and characterization of a novel gene, SHPRH, encoding a
conserved putative protein with SNF2/helicase and PHD-finger
domains from the 6q24 region
JOURNAL Genomics 82 (2), 153-161 (2003)
PUBMED 12837266
REFERENCE 2 (bases 1 to 6018)
AUTHORS Sood,R.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2002) CGB, NHGRI/NIH, 50 South Drive, Bethesda,
MD 20892, USA
FEATURES Location/Qualifiers
source 1..6018
/db_xref="H-InvDB:HIT000250859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..6018
/gene="SHPRH"
CDS 352..5403
/gene="SHPRH"
/codon_start=1
/product="SNF2 histone linker PHD RING helicase"
/protein_id="AAO26201.1"
/translation="MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPC
PGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVGIFSPLSVKLNIV
ISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDV
EKQKKEPMSICDKGILVESSFSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLE
AGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPDVLEEDEDDPESEPEGQDIDEL
YHFVKQTHQQETQSIQVDVQHPALIPVLRPYQREAVNWMLQQECFRSSPATESALHFL
WREIVTSEGLKLYYNPYTGCIIREYPNSGPQLLGGILADEMGLGKTVEVLALILTHTR
QDVKQDALTLPEGKVVNYFIPSHYFGGKLKKTEIQNIEFEPKEKVQCPPTRVMILTAV
KEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRMLKCLIFEGLVKQIKGHGFSGTF
TLGKNYKEEDICDKTKKQAVGSPRKIQKETRKSGNKDTDSEYLPSDTSDDDDDPYYYY
YKSRRNRSKLRKKLVPSTKKGKSQPFINPDSQGHCPATSDSGITDVAMSKSTCISEFN
QEHETEDCAESLNHADSDVPPSNTMSPFNTSDYRFECICGELDQIDRKPRVQCLKCHL
WQHAKCVNYDEKNLKIKPFYCPHCLVAMEPVSTRATLIISPSSICHQWVDEINRHVRS
SSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHSNSEDGRRLRNQ
KRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCISGTPVQRGLE
DLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQIQI
PPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLSSLDRRTVTSILY
PLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGL
AGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPP
TLRDGRLEEEAKQLRXHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVI
HRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQ
KLVREAVKNLEGPPSRNVIXSATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTV
KGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDE
GSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLH
IIEPHEVEQNRIKLLNDKAVXTSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEPCPICA
RQLGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSE
KANQEEDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNN
MEFAQISRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAH
ELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNSSAKHSEASVLTV
ADLADLFTKETEELE"
BASE COUNT 1873 a 1196 c 1345 g 1598 t
ORIGIN
1 cccgggaagc tcaagggctg agagggagcc gctgcgcgag tcttccccac ctcttcccga
61 tcccggacta gcgaacttcg gaccaccacg tccctccggg gataaagtgg ggtcgtggga
121 aaggaggctg tgcttctcct catgcactgg ggcctgcggt gtttgtctcg agcgtccaac
181 acactaggat ccgggagtcc gtcgtcacgc tccttggcct cgcggtcgct tgtttgctcg
241 gcctgctggg agcgatccgg cgctgacagc cccgctcaga ctccgggagc cgcttgtggg
301 tctttcggaa gataactgaa gttcacagtt accagccaag aaaacttgaa aatgagcagc
361 cgacggaaac gtgctcctcc agtgagggta gatgaggaaa agaggcagca gcttcattgg
421 aatatgcatg aggacagaag gaatgaacct atcatcataa gtgatgatga cgagcagccc
481 tgcccaggtt cagatacctc ttctgctcat tatatcattc taagtgatag tctaaaggaa
541 gaagtggctc acagagataa gaagaggtgt tcaaaagtgg tgagcttctc aaaaccaatt
601 gaaaaagaag agactgttgg tattttttcc cctttgtctg taaagttaaa tattgtgatt
661 tctccctatc attttgataa ttcctggaaa gcatttctag gagaattaac tcttcagctt
721 cttcctgcac agagtttaat tgaaaatttt tccgaaagga gtattacatt gatgagttca
781 gagtcaagca atcagttcct gatttatgtt cattcaaaag gtgaagatgt agagaaacaa
841 aaaaaagaac cgatgagtat ttgtgacaag ggtattctgg tggagtcatc cttcagtggt
901 gaaatgttag aagatttggg gtggctacaa aagaagagaa gaataaaact ctatcagaaa
961 ccagaaggaa atcacattat caaggttgga atttatcttt tggaagctgg cctagcaaaa
1021 ctagacttct tgagtgatgc aaattcaaga atgaaaaagt tcaatcagct catgaagaaa
1081 gtaatggaaa agttacacaa ttctattatt ccagatgtgt tggaagagga tgaagatgat
1141 ccggagagtg agccagaggg acaagacatt gacgagctgt atcactttgt gaaacaaaca
1201 catcagcaag aaacgcagtc catccaagtg gatgtccagc atcctgcatt gatccctgtg
1261 ttgagaccct accaaagaga ggctgtcaat tggatgctac aacaagagtg tttcagaagc
1321 agtcctgcta ctgaaagtgc cctgcacttc ttatggcgag agattgttac atctgagggt
1381 ctgaaactct actataatcc atatacaggc tgcatcattc gtgagtaccc aaattctggg
1441 ccgcagttgc ttggtggaat tttagcagat gagatgggtc ttggaaagac agtggaggtt
1501 ttggctctga ttctgacaca tactcgacaa gatgtcaagc aagatgctct cactcttccc
1561 gagggaaaag tggtgaatta ttttattccg tcacattatt ttggaggaaa actgaaaaag
1621 acagaaatcc agaatatcga atttgaacca aaagaaaaag ttcaatgccc tcctacacgt
1681 gtgatgatac tgacagctgt gaaagaaatg aatggaaaaa aaggagtgtc catcctttcc
1741 atctataagt atgtcagttc tatatataga tacgatgttc aacggaacag gagtcttttg
1801 aaacggatgc tgaaatgttt aatttttgaa ggtctcgtga aacagatcaa aggccatggt
1861 ttttctggga cttttacatt gggaaagaat tacaaggaag aggatatatg tgataaaaca
1921 aaaaagcagg cagtagggag tccaaggaaa attcagaaag aaactagaaa atcagggaac
1981 aaggacacag attctgaata cttgccatca gacacctctg atgatgatga tgatccttac
2041 tattattatt ataagtccag gagaaatcgc agtaaattga ggaaaaagct tgttccatcc
2101 acaaaaaaag gaaaaagtca accatttatc aatcccgatt cacaaggtca ctgtccagct
2161 actagcgact ctggaataac tgatgttgct atgtctaaaa gtacatgtat ctctgaattc
2221 aaccaagaac atgaaacaga ggactgtgct gaatctctaa atcatgctga tagtgatgta
2281 ccaccttcta ataccatgag tccctttaac acctctgatt accgctttga gtgtatatgt
2341 ggtgaacttg atcagataga tcgtaagcct cgtgttcaat gcctgaagtg tcacctgtgg
2401 caacatgcaa agtgtgtgaa ttatgatgag aaaaatctga agatcaagcc tttttactgc
2461 ccccactgcc ttgttgcaat ggaaccagtg tcaacaagag caactctgat catctctcca
2521 agttccatct gtcaccagtg ggtggatgag atcaacaggc atgtgaggtc gtcatctctt
2581 cgagtcttgg tatatcaagg agtgaagaaa gatggctttt tacaacctca ttttttggca
2641 gaacaggata tagttatcat tacctatgat gtactgcgtt cagaattaaa ttatgtcgat
2701 atcccacata gcaatagtga ggatgggcgt cgcctacgga accagaagcg ctatatggct
2761 atcccgagcc ccctggtagc tgtggagtgg tggaggatct gccttgatga agctcagatg
2821 gttgagtgtc ccacagtaaa agctgcagaa atggcccagc gtttgagtgg gattaatcga
2881 tggtgtatca gtggcactcc agtacagaga ggattagagg atctttttgg gttagtggtc
2941 tttcttggta ttgaacctta ctgtgtcaaa cactggtggg ttcgacttct ctatcggcct
3001 tactgcaaga agaatcctca gcatctctac agctttattg ccaagatact gtggaggtct
3061 gcaaagaaag atgtgattga ccaaatccaa ataccaccac aaaccgaaga aatacactgg
3121 ctccactttt ctccagtgga aaggcatttc tatcaccgtc agcatgaggt gtgctgccag
3181 gatgtggtgg taaaactcag gaagatttct gactgggctc tgaagctcag cagcctagac
3241 agaaggactg tcacctctat cctgtatcca ttgctgaggc tcagacaggc ctgctgtcac
3301 ccacaggctg ttcgtggaga gttcttgcca ctccaaaaaa gcaccatgac aatggaagag
3361 ctgctgacat ctttgcagaa gaaatgtgga actgaatgtg aagaagcaca tcgacagcta
3421 gtttgtgctc tcaatggctt agcaggcatt catattatta aaggtgagta tgccttggca
3481 gcagaattgt acagagaagt gttgcgctcc tcggaggaac acaaaggaaa actcaaaact
3541 gattcacttc aaagacttca tgctacccat aacttgatgg aattgttgat agccaggcac
3601 ccagggatac cacctacctt gcgtgatggc cgacttgagg aagaggccaa acagctgcga
3661 grgcactaca tgagcaagtg taatacagaa gttgctgaag cccagcaagc tttatatcct
3721 gtgcagcaga ccatccatga gcttcaaaga aagattcatt ctaattctcc ttggtggcta
3781 aatgtgatcc acagagcaat agaatttact attgatgagg agctagttca gcgagtgcga
3841 aatgaaataa ccagcaacta caagcaacaa actggcaagc tttctatgtc agagaagttc
3901 cgtgattgca gaggtcttca gttcttactt acaacacaaa tggaagagct aaataaatgc
3961 cagaagctag taagagaggc tgtaaaaaac ctggagggac ctccatctcg taatgttatt
4021 grgtctgcaa cagtctgtca cctccgacca gccagacttc ctctcaactg ctgtgtcttt
4081 tgtaaagctg atgaattgtt cacagagtat gaatcaaagc tattttccaa cacagtcaaa
4141 ggccagactg caatatttga ggagatgata gaagatgaag aaggactggt ggatgatcga
4201 gcacctacca ccacccgggg tctctgggca ataagtgaga cagagcgatc tatgaaagca
4261 atactatcat ttgcaaaatc acataggttt gatgttgaat ttgttgatga aggaagcact
4321 tcaatggatc tctttgaagc atggaagaag gaatataagt tgcttcatga atattggatg
4381 gctctgagga atcgtgtrtc tgctgttgay gaacttgcaa tggctacaga acgactaaga
4441 gtgcgtgatc ctagggagcc aaagcctaat ccgcctgttc ttcatatcat tgaaccacat
4501 gaggtagaac aaaaccgaat aaaactacta aatgataaag ctgttrctac atcacagctt
4561 cagaaaaaac ttgggcagct tctttaccta actaatttgg agaagtctca agataaaaca
4621 tcgggaggtg ttaatccaga accttgtcca atctgtgctc gacagctagg aaaacagtgg
4681 gcggtactga cctgtggtca ctgtttctgt aatgaatgca tttctataat tattgaacaa
4741 tacagcgtgg gatctcacag aagctccatt aagtgtgcaa tctgccgcca gaccacatct
4801 cacaaagaaa tctcgtatgt ctttacctca gagaaagcaa accaggagga ggacatccct
4861 gtgaagggca gccattctac aaaagtggaa gctgtggtca gaactctgat gaaaatacag
4921 cttagagatc caggggccaa agcactcgtt ttctcaacgt ggcaagatgt attagatatt
4981 atttcaaaag ctcttactga caacaacatg gaatttgcac aaatcagtcg tgttaagaca
5041 tttcaggaga acctttcagc atttaaacgt gatccccaaa tcaatatttt gctgctgccc
5101 ctgcacacag gttctaatgg attaactatc attgaagcaa ctcatgttct cttggtggag
5161 cccatattga accctgccca tgagcttcag gccataggga gggtgcaccg aattggacag
5221 acaaaaccta ctattgtaca cagattctta attaaagcaa caatagaaga aagaatgcag
5281 gcaatgctga aaactgctga gagaagtcac acgaactcat cagcaaagca ttcagaggcc
5341 tctgtcttga ctgtggctga cctggcagac ctatttacca aagaaactga rgagcttgaa
5401 tgaactacac ttgattcatt ccatggactt tagtgtatta ataaactttc atagctgtag
5461 agcaaagtta caagttttaa aaacccagta gataacagta acactgttcc tagttgaatg
5521 aatttgttta ttgttctggt tatacagtgg cttagtactt attgagtcct tttcaatata
5581 ctgtttccaa aagatctata aagattctta attttacact cctaataaaa catttatttt
5641 ttgtcccaaa tagtatctat atctgatgat gcaagggaat taagagaggt aatgtgtact
5701 tttcttatga taagatcact cataaaacag ttggaataag aaagtaaact agtctagttt
5761 tatatgacct ggtatattga acaaacatag atctcagttt tggaagggcc ttcagtatct
5821 ttagcacatg attcaccaat atcttgttag taatatttta agtagatggt gaattatatt
5881 aacccatttt ttgagtaggc ttataccata actttacacc tagtaatttt gcagtaatac
5941 aactccttac aataagttaa tgttagacag ttatttgttt cttctgcatc ttgctactga
6001 aaacaaaaac aaaaaaaa
//