LOCUS AY157303 2539 bp mRNA linear HUM 14-APR-2005
DEFINITION Homo sapiens neuronal PAS3 transcript variant 2 (NPAS3) mRNA,
complete cds.
ACCESSION AY157303
VERSION AY157303.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2539)
AUTHORS Kamnasaran,D., Muir,W.J., Ferguson-Smith,M.A. and Cox,D.W.
TITLE Disruption of the neuronal PAS3 gene in a family affected with
schizophrenia
JOURNAL J. Med. Genet. 40 (5), 325-332 (2003)
PUBMED 12746393
REFERENCE 2 (bases 1 to 2539)
AUTHORS Kamnasaran,D., Chen,C.P., Devriendt,K., Mehta,L. and Cox,D.W.
TITLE Defining a holoprosencephaly locus on human chromosome 14q13 and
characterization of potential candidate genes
JOURNAL Genomics 85 (5), 608-621 (2005)
PUBMED 15820313
REFERENCE 3 (bases 1 to 2539)
AUTHORS Kamnasaran,D. and Cox,D.W.
TITLE Cloning and characterization of a novel gene expressed in human
fetal brain
JOURNAL Unpublished
REFERENCE 4 (bases 1 to 2539)
AUTHORS Kamnasaran,D. and Cox,D.W.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2002) Medical Genetics, University of Alberta,
843 Medical Sciences Building, Edmonton, AB T6G 2H7, Canada
FEATURES Location/Qualifiers
source 1..2539
/db_xref="H-InvDB:HIT000250847"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="14"
/map="14q13"
/tissue_type="brain"
/dev_stage="fetus"
gene 1..2539
/gene="NPAS3"
CDS 1671..2132
/gene="NPAS3"
/note="transcription factor"
/codon_start=1
/product="neuronal PAS3 transcript variant 2"
/protein_id="AAO17044.1"
/translation="MRDFANQGDPPWNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEA
HLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEM
AEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVVCFPPASDQFLL"
BASE COUNT 785 a 478 c 489 g 787 t
ORIGIN
1 gattttgtca cctgagactg ctgttactct gaaaatgata gcattaactt gtctaattct
61 gagaaagaca tttgttagct aatgtagact attaatagag caaacataaa actggttggg
121 tattagccta gcaagtatct gaccagagca ttatggcatt acttagatta catagatatt
181 cagtaagata tttcaggtgt gatttctgca gtgaatacag tgtttacacc agaaaacaat
241 gtcaggaatc ctataatgta atagggaata ttattcacca tagtatatta aaagagaacg
301 gagccttgct gctgaaccaa ttttgatctc ttcctttggt cttccttcct tccttgtttc
361 tctctttctt attatttcat aatgaaaaaa aagaatgcta gactcaaata tttacagtgc
421 tttcagaatt caataaaatg catacataaa aatgatttta atagtacctt gatactgaaa
481 atattatcta gctacttatc attgtggtct gatttttaaa tttatttctc atcagacaca
541 atacagagca attcagagca ggtagaattc ttctgtcaga tgctcacaca caacttcagt
601 tgtgccagat tctgccctca gcaatgtgag caaacttcaa acagaaatgc acatgaatag
661 ttgaaggaaa atgctggatc ccacctgttg cctcttctgg gaagtaatat gtctataatg
721 tttataaatt ttaataaccc atacagcgct ttatctttca atattaaatt tatattttcc
781 taaagtttga cttctttggg caatatattt tattctctag tatcttagaa aatcaatcta
841 ctaatgtatg tccattaata aataagtatg ctcttatcaa gcagttatca gcacatttat
901 aaaattacat tgaaatcttc attttaaata tgatgttttc ttcatctaac tgaacatgct
961 gtgatcttta ttgagggctg gaaacatatt tgttgattct gacaaggtga attgtattcg
1021 tgtttacctt ctgctcccca agattataat tgaaatgaat ttttcaaaat agttcctttt
1081 gatgaagatc ccatactgat gaaagttaaa tgaacagaag tattagtttg aaatagatac
1141 acgaatgtaa gcccaactta taaattgatt ctagttgata atatcaagct acgcctgtaa
1201 accttctgtt aggtcttaga aacaataaat acatctcaat gcatggacaa ttgaaggaaa
1261 aaaaccttaa caagtaaaac acaattttta ctcattggac ttgagtttac aaaatgtaag
1321 gccagagtta gagtttatgg ctttagtgga cattttctgg aactcatttt actgtcactc
1381 tctagttttg aaatagtttt tggtagaatt ttggtgggaa aaaaggaaat acaaagaaag
1441 cagtatttga atgatgacag agtcacatat tctaaaccac acattctcac tcctttgatt
1501 tcagtttaca agcattgaga aaggagaaat cccgagatgc tgctcgctcc cgccggggaa
1561 aagaaaactt tgagttctat gaattggcca agttgttgcc tcttcctgca gccattacca
1621 gccagctcga caaggcatcc atcattcgac ttacaattag ctatctgaaa atgagggact
1681 ttgctaacca gggggaccct ccgtggaact tgcgaatgga aggccctcca cctaacacat
1741 cagtaaaagg tgcacagcga aggagaagcc ccagtgcact agccattgaa gtatttgaag
1801 cacatttggg aagccacatt ttgcagtccc tggatggctt tgtatttgca ctaaatcagg
1861 aaggaaaatt tttgtacatt tccgaaacag tctccatcta cctaggcctc tcacaagtgg
1921 agctgacagg cagcagtgtc tttgactatg tccaccccgg agatcacgtg gagatggctg
1981 agcagctggg catgaagctc ccccctgggc ggggtctcct gtcacagggc actgctgagg
2041 acggagccag ctcagcatct tcctcctctc agtcggagac ccccgagcca gtggtttgct
2101 tcccaccagc gagtgatcag tttcttctgt aggacccctg tcaggaagaa catgcctgga
2161 tcctacttca gagagaactc agccagggca aggggctctt gtggcttttt gggtgggtgt
2221 gagttcatag aggggaaaat caatactgta ccaggattta gacaatttag caaaatgcat
2281 gaggcagtac tttggatgat gaataactac agctgcatgg ctaacccatt ggttgtgtaa
2341 agtatgggtt atcatgtttt gtctaaattt tcaggcaaaa tctagcctgt tttgtggcat
2401 taggatcatc attatagtag tatgattttt atgctattat acttacgcta tgtcccgaat
2461 gtttttaagg ccagcaaaat ggaaacagta gagtacttgc ctgaatgcaa ataaacttca
2521 gtttcaactt aaaaaaaaa
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