LOCUS AY138900 1658 bp mRNA linear HUM 14-APR-2003 DEFINITION Homo sapiens small conductance calcium-activated potassium channel subfamily N member 3 variant 1B (KCNN3) mRNA, complete cds; alternatively spliced. ACCESSION AY138900 VERSION AY138900.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1658) AUTHORS Tomita,H., Shakkottai,V.G., Gutman,G.A., Sun,G., Bunney,W.E., Cahalan,M.D., Chandy,G.K. and Gargus,J.J. TITLE Novel truncated isoform of SK3 potassium channel is a potent dominant-negative regulator of SK currents: implications in schizophrenia JOURNAL Mol. Psychiatry (2002) In press REFERENCE 2 (bases 1 to 1658) AUTHORS Tomita,H., Shakkottai,V.G., Gutman,G.A., Sun,G., Bunney,W.E., Cahalan,M.D., Chandy,G.K. and Gargus,J.J. TITLE Direct Submission JOURNAL Submitted (02-AUG-2002) Physiology and Biophysics, University of California Irvine, 288 Irvine Hall, UCI, Irvine, CA 92697-4561, USA FEATURES Location/Qualifiers source 1..1658 /db_xref="H-InvDB:HIT000084709" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="1" /map="1q21" gene 1..1658 /gene="KCNN3" /gene_synonym="SK3" /gene_synonym="SKCA3" exon 1..371 /gene="KCNN3" /gene_synonym="SK3" /gene_synonym="SKCA3" /note="alternate" /number=1B CDS 378..1634 /gene="KCNN3" /gene_synonym="SK3" /gene_synonym="SKCA3" /note="alternatively spliced" /codon_start=1 /product="small conductance calcium-activated potassium channel subfamily N member 3 variant 1B" /protein_id="AAN46636.1" /translation="MFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIA MTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRL YLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWII AAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMG AGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLL KKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELND RSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLRQQQQQLLSAIIEARGVSVAVGTT HTPISDSPIGVSSTSFPTPYTSSSSC" BASE COUNT 376 a 509 c 426 g 347 t ORIGIN 1 gaggactcag aataaacctg ctgctgcttc gtaaacatct cctgataaaa atggctacag 61 gtgttacctg ggcagagcag ctgggcgccg ccttggaatc agctggggga gcacctctcc 121 ttgggacggg atgacagggc ttcccaggcg gtccccacaa gcccgcgccc cagctcagcc 181 ccagttctcc cctcccacct caactcctcc ttgggataaa taaagatgag tgtgtgtgtg 241 agtgcgcgcc cggatggaga acagcaggca ctggctttag cggggagctg gccccactgc 301 tccagcctct cagtccagcc ccaagacgga ggagggggtt tccctcccag agggagtgga 361 gatggaggaa ggactccatg ttttcgttgg ccctgaaatg ccttatcagt ctgtccacca 421 tcatcctttt gggcttgatc atcgcctacc acacacgtga agtccagctc ttcgtgatcg 481 acaacggcgc ggatgactgg cggatagcca tgacctacga gcgcatcctg tacatcagcc 541 tggagatgct ggtgtgcgcc atccacccca ttcctggcga gtacaagttc ttctggacgg 601 cacgcctggc cttctcctac acaccctccc gggcggaggc cgatgtggac atcatcctgt 661 ctatccccat gttcctgcgc ctgtacctga tcgcccgagt catgctgctg cacagcaagc 721 tcttcaccga tgcctcgtcc cgcagcatcg gggccctcaa caagatcaac ttcaacaccc 781 gctttgtcat gaagacgctc atgaccatct gccctggcac tgtgctgctc gtgttcagca 841 tctctctgtg gatcattgct gcctggaccg tccgtgtctg tgaaaggtac catgaccagc 901 aggacgtaac tagtaacttt ctgggtgcca tgtggctcat ctccatcaca ttcctttcca 961 ttggttatgg ggacatggtg ccccacacat actgtgggaa aggtgtctgt ctcctcactg 1021 gcatcatggg tgcaggctgc actgcccttg tggtggccgt ggtggcccga aagctggaac 1081 tcaccaaagc ggagaagcac gttcataact tcatgatgga cactcagctc accaagcgga 1141 tcaagaatgc tgcagccaat gtccttcggg aaacatggtt aatctataaa cacacaaagc 1201 tgctaaagaa gattgaccat gccaaagtga ggaaacacca gaggaagttc ctccaagcta 1261 tccaccagtt gaggagcgtc aagatggaac agaggaagct gagtgaccaa gccaacactc 1321 tggtggacct ttccaagatg cagaatgtca tgtatgactt aatcacagaa ctcaatgacc 1381 ggagcgaaga cctggagaag cagattggca gcctggagtc gaagctggag catctcaccg 1441 ccagcttcaa ctccctgccg ctgctcatcg ccgacaccct gcgccagcag cagcagcagc 1501 tcctgtctgc catcatcgag gcccggggtg tcagcgtggc agtgggcacc acccacaccc 1561 caatctccga tagccccatt ggggtcagct ccacctcctt cccgaccccg tacacaagtt 1621 caagcagttg ctaaataaat ctccccactc cagaagca //