LOCUS AY116207 3221 bp mRNA linear HUM 21-MAY-2003 DEFINITION Homo sapiens monarch-1 splice form IV mRNA, complete cds; alternatively spliced. ACCESSION AY116207 VERSION AY116207.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3221) AUTHORS Williams,K.L., Taxman,D.J., Linhoff,M.W., Reed,W. and Ting,J.P. TITLE Cutting edge: Monarch-1: a pyrin/nucleotide-binding domain/leucine-rich repeat protein that controls classical and nonclassical MHC class I genes JOURNAL J. Immunol. 170 (11), 5354-5358 (2003) PUBMED 12759408 REFERENCE 2 (bases 1 to 3221) AUTHORS Williams,K.L., Linhoff,M.W. and Ting,J.P.Y. TITLE Direct Submission JOURNAL Submitted (29-MAY-2002) Lineberger Cancer Center, UNC, Mason Farm Road, Chapel Hill, NC 27599, USA FEATURES Location/Qualifiers source 1..3221 /db_xref="H-InvDB:HIT000084472" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="19" /map="19q13.4" CDS 221..2899 /note="contains alternatively spliced exons 7, 8 and 9" /codon_start=1 /product="monarch-1 splice form IV" /protein_id="AAM75145.1" /translation="MLRTAGRDGLCRLSTYLEELEAVELKKFKLYLGTATELGEGKIP WGSMEKAGPLEMAQLLITHFGPEEAWRLALSTFERINRKDLWERGQREDLVRDTPPGG PSSLGNQSTCLLEVSLVTPRKDPQETYRDYVRRKFRLMEDRNARLGECVNLSHRYTRL LLVKEHSNPMQVQQQLLDTGRGHARTVGHQASPIKIETLFEPDEERPEPPRTVVMQGA AGIGKSMLAHKVMLDWADGKLFQGRFDYLFYINCREMNQSATECSMQDLIFSCWPEPS APLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTELLLNSLIRKKLLP ELSLLITTRPTALEKLHRLLEHPRHVEILGFSEAERKEYFYKYFHNAEQAGQVFNYVR DNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVYMLYLLSLMQPKPGAP RLQPPPNQRGLCSLAADGLWNQKILFEEQDLRKHGLDGEDVSAFLNMNIFQKDINCER YYSFIHLSFQEFFAAMYYILDEGEGGAGPDQDVTRLLTEYAFSERSFLALTSRFLFGL LNEETRSHLEKSLCWKVSPHIKMDLLQWIQSKAQSDGSTLQQGSLEFFSCLYEIQEEE FIQQALSHFQVIVVSNIASKMEHMVSSFCLKRCRSAQVLHLYGATYSADGEDRARCSA GAHTLLVQLRPERTVLLDAYSEHLAAALCTNPNLIELSLYRNALGSRGVKLLCQGLRH PNCKLQNLRLKRCRISSSACEDLSAALIANKNLTRMDLSGNGVGFPGMMLLCEGLRHP QCRLQMIQLRKCQLESGACQEMASVLGTNPHLVELDLTGNALEDLGLRLLCQGLRHPV CRLRTLWWLFGMDLNKMTHSRLAALRVTKPYLDIGC" misc_feature 869..892 /note="Region: P-loop" misc_feature 2069..2896 /note="Region: leucine rich repeat" misc_feature 221..289 /note="Region: pyrin domain" BASE COUNT 749 a 891 c 936 g 645 t ORIGIN 1 attggtgagt ggggcagggc aggagggaac tgaagagtga gaaagcatta tttcagcaaa 61 aggtctttcc tcccttgctc actcctccaa ccactggctc agcctctccg cccgctgcct 121 gtgaatgatg caatggaagg tgtgctgggg tcgccctgtg tcccgtgcat aggagcatct 181 cagcctccag gtcctctcct ttggggctta cggcaccccc atgctacgaa ccgcaggcag 241 ggacggcctc tgtcgcctgt ccacctactt ggaagaactc gaggctgtgg aactgaagaa 301 gttcaagtta tacctgggga ccgcgacaga gctgggagaa ggcaagatcc cctggggaag 361 catggagaag gccggtcccc tggaaatggc ccagctgctc atcacccact tcgggccaga 421 ggaggcctgg aggttggctc tcagcacctt tgagcggata aacaggaagg acctgtggga 481 gagaggacag agagaggacc tggtgaggga taccccacct ggtggcccgt cctcacttgg 541 gaaccagtca acatgccttc tggaagtctc tcttgtcact ccaagaaaag atccccagga 601 aacctacagg gactatgtcc gcaggaaatt ccggctcatg gaagaccgca atgcgcgcct 661 aggggaatgt gtcaacctca gccaccggta cacccggctc ctgctggtga aggagcactc 721 aaaccccatg caggtccagc agcagcttct ggacacaggc cggggacacg cgaggaccgt 781 gggacaccag gctagcccca tcaagataga gaccctcttt gagccagacg aggagcgccc 841 cgagccaccg cgcaccgtgg tcatgcaagg cgcggcaggg ataggcaagt ccatgctggc 901 acacaaggtg atgctggact gggcggacgg gaagctcttc caaggcagat ttgattatct 961 cttctacatc aactgcaggg agatgaacca gagtgccacg gaatgcagca tgcaagacct 1021 catcttcagc tgctggcctg agcccagcgc gcctctccag gagctcatcc gagttcccga 1081 gcgcctcctt ttcatcatcg acggcttcga tgagctcaag ccttctttcc acgatcctca 1141 gggaccctgg tgcctctgct gggaggagaa acggcccacg gagctgcttc ttaacagctt 1201 aattcggaag aagctgctcc ctgagctatc tttgctcatc accacacggc ccacggcttt 1261 ggagaagctc caccgtctgc tggagcaccc caggcatgtg gagatcctgg gcttctctga 1321 ggcagaaagg aaggaatact tctacaagta tttccacaat gcagagcagg cgggccaagt 1381 cttcaattac gtgagggaca acgagcctct cttcaccatg tgcttcgtcc ccctggtgtg 1441 ctgggtggtg tgtacctgcc tccagcagca gctggagggt ggggggctgt tgagacagac 1501 gtccaggacc accactgcag tgtacatgct ctacctgctg agtctgatgc aacccaagcc 1561 gggggccccg cgcctccagc ccccacccaa ccagagaggg ttgtgctcct tggcggcaga 1621 tgggctctgg aatcagaaaa tcctatttga ggagcaggac ctccggaagc acggcctaga 1681 cggggaagac gtctctgcct tcctcaacat gaacatcttc cagaaggaca tcaactgtga 1741 gaggtactac agcttcatcc acttgagttt ccaggaattc tttgcagcta tgtactatat 1801 cctggacgag ggggagggcg gggcaggccc agaccaggac gtgaccaggc tgttgaccga 1861 gtacgcgttt tctgaaagga gcttcctggc actcaccagc cgcttcctgt ttggactcct 1921 gaacgaggag accaggagcc acctggagaa gagtctctgc tggaaggtct cgccgcacat 1981 caagatggac ctgttgcagt ggatccaaag caaagctcag agcgacggct ccaccctgca 2041 gcagggctcc ttggagttct tcagctgctt gtacgagatc caggaggagg agtttatcca 2101 gcaggccctg agccacttcc aggtgatcgt ggtcagcaac attgcctcca agatggagca 2161 catggtctcc tcgttctgtc tgaagcgctg caggagcgcc caggtgctgc acttgtatgg 2221 cgccacctac agcgcggacg gggaagaccg cgcgaggtgc tccgcaggag cgcacacgct 2281 gttggtgcag ctcagaccag agaggaccgt tctgctggac gcctacagtg aacatctggc 2341 agcggccctg tgcaccaatc caaacctgat agagctgtct ctgtaccgaa atgccctggg 2401 cagccggggg gtgaagctgc tctgtcaagg actcagacac cccaactgca aacttcagaa 2461 cctgaggctg aagaggtgcc gcatctccag ctcagcctgc gaggacctct ctgcagctct 2521 catagccaat aagaatttga caaggatgga tctcagtggc aacggcgttg gattcccagg 2581 catgatgctg ctttgcgagg gcctgcggca tccccagtgc aggctgcaga tgattcagtt 2641 gaggaagtgt cagctggagt ccggggcttg tcaggagatg gcttctgtgc tcggcaccaa 2701 cccacatctg gttgagttgg acctgacagg aaatgcactg gaggatttgg gcctgaggtt 2761 actatgccag ggactgaggc acccagtctg cagactacgg actttgtggt ggttatttgg 2821 gatggacctg aataaaatga cccacagtag gttggcagcg cttcgagtaa caaaacctta 2881 tttggacatt ggctgctgaa tggtcctatc tgctggctct cccctgagat ctggacagag 2941 gaagatggga gggtgctcat caccccccca gcataatgat cagcctcctt cctagagaca 3001 gactcatgca gattgagatc aaaagtccct ctgcttggga tcaaattaat gtttgacaga 3061 gctggccagg cgtggtggct catgtatgta atcctagcac ttcgagaggc cgaggcaggt 3121 ggatcacgag gtcaggagtt tgagattagc ctggccaaga tggtgaaacc ctgtctctac 3181 taaaaataaa aaaaaattag ccaggaaaaa aaaaaaaaaa a //