LOCUS       AY116206                3395 bp    mRNA    linear   HUM 21-MAY-2003
DEFINITION  Homo sapiens monarch-1 splice form III mRNA, complete cds;
            alternatively spliced.
ACCESSION   AY116206
VERSION     AY116206.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Williams,K.L., Taxman,D.J., Linhoff,M.W., Reed,W. and Ting,J.P.
  TITLE     Cutting edge: Monarch-1: a pyrin/nucleotide-binding
            domain/leucine-rich repeat protein that controls classical and
            nonclassical MHC class I genes
  JOURNAL   J. Immunol. 170 (11), 5354-5358 (2003)
   PUBMED   12759408
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Williams,K.L., Linhoff,M.W. and Ting,J.P.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2002) Lineberger Cancer Center, UNC, Mason Farm
            Road, Chapel Hill, NC 27599, USA
FEATURES             Location/Qualifiers
     source          1..3395
                     /db_xref="H-InvDB:HIT000084471"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.4"
     CDS             221..3073
                     /note="contains alternatively spliced exons 7 and 8"
                     /codon_start=1
                     /product="monarch-1 splice form III"
                     /protein_id="AAM75144.1"
                     /translation="MLRTAGRDGLCRLSTYLEELEAVELKKFKLYLGTATELGEGKIP
                     WGSMEKAGPLEMAQLLITHFGPEEAWRLALSTFERINRKDLWERGQREDLVRDTPPGG
                     PSSLGNQSTCLLEVSLVTPRKDPQETYRDYVRRKFRLMEDRNARLGECVNLSHRYTRL
                     LLVKEHSNPMQVQQQLLDTGRGHARTVGHQASPIKIETLFEPDEERPEPPRTVVMQGA
                     AGIGKSMLAHKVMLDWADGKLFQGRFDYLFYINCREMNQSATECSMQDLIFSCWPEPS
                     APLQELIRVPERLLFIIDGFDELKPSFHDPQGPWCLCWEEKRPTELLLNSLIRKKLLP
                     ELSLLITTRPTALEKLHRLLEHPRHVEILGFSEAERKEYFYKYFHNAEQAGQVFNYVR
                     DNEPLFTMCFVPLVCWVVCTCLQQQLEGGGLLRQTSRTTTAVYMLYLLSLMQPKPGAP
                     RLQPPPNQRGLCSLAADGLWNQKILFEEQDLRKHGLDGEDVSAFLNMNIFQKDINCER
                     YYSFIHLSFQEFFAAMYYILDEGEGGAGPDQDVTRLLTEYAFSERSFLALTSRFLFGL
                     LNEETRSHLEKSLCWKVSPHIKMDLLQWIQSKAQSDGSTLQQGSLEFFSCLYEIQEEE
                     FIQQALSHFQVIVVSNIASKMEHMVSSFCLKRCRSAQVLHLYGATYSADGEDRARCSA
                     GAHTLLVQLRPERTVLLDAYSEHLAAALCTNPNLIELSLYRNALGSRGVKLLCQGLRH
                     PNCKLQNLRLKRCRISSSACEDLSAALIANKNLTRMDLSGNGVGFPGMMLLCEGLRHP
                     QCRLQMIQLRKCQLESGACQEMASVLGTNPHLVELDLTGNALEDLGLRLLCQGLRHPV
                     CRLRTLWLWLDSCGLTAKACENLYFTLGINQTLTDLYLTNNALGDTGVRLLCKRLSHP
                     GCKLRVLWLFGMDLNKMTHSRLAALRVTKPYLDIGC"
     misc_feature    869..892
                     /note="Region: P-loop"
     misc_feature    2069..3070
                     /note="Region: leucine rich repeat"
     misc_feature    221..289
                     /note="Region: pyrin domain"
BASE COUNT          786 a          946 c          980 g          683 t
ORIGIN      
        1 attggtgagt ggggcagggc aggagggaac tgaagagtga gaaagcatta tttcagcaaa
       61 aggtctttcc tcccttgctc actcctccaa ccactggctc agcctctccg cccgctgcct
      121 gtgaatgatg caatggaagg tgtgctgggg tcgccctgtg tcccgtgcat aggagcatct
      181 cagcctccag gtcctctcct ttggggctta cggcaccccc atgctacgaa ccgcaggcag
      241 ggacggcctc tgtcgcctgt ccacctactt ggaagaactc gaggctgtgg aactgaagaa
      301 gttcaagtta tacctgggga ccgcgacaga gctgggagaa ggcaagatcc cctggggaag
      361 catggagaag gccggtcccc tggaaatggc ccagctgctc atcacccact tcgggccaga
      421 ggaggcctgg aggttggctc tcagcacctt tgagcggata aacaggaagg acctgtggga
      481 gagaggacag agagaggacc tggtgaggga taccccacct ggtggcccgt cctcacttgg
      541 gaaccagtca acatgccttc tggaagtctc tcttgtcact ccaagaaaag atccccagga
      601 aacctacagg gactatgtcc gcaggaaatt ccggctcatg gaagaccgca atgcgcgcct
      661 aggggaatgt gtcaacctca gccaccggta cacccggctc ctgctggtga aggagcactc
      721 aaaccccatg caggtccagc agcagcttct ggacacaggc cggggacacg cgaggaccgt
      781 gggacaccag gctagcccca tcaagataga gaccctcttt gagccagacg aggagcgccc
      841 cgagccaccg cgcaccgtgg tcatgcaagg cgcggcaggg ataggcaagt ccatgctggc
      901 acacaaggtg atgctggact gggcggacgg gaagctcttc caaggcagat ttgattatct
      961 cttctacatc aactgcaggg agatgaacca gagtgccacg gaatgcagca tgcaagacct
     1021 catcttcagc tgctggcctg agcccagcgc gcctctccag gagctcatcc gagttcccga
     1081 gcgcctcctt ttcatcatcg acggcttcga tgagctcaag ccttctttcc acgatcctca
     1141 gggaccctgg tgcctctgct gggaggagaa acggcccacg gagctgcttc ttaacagctt
     1201 aattcggaag aagctgctcc ctgagctatc tttgctcatc accacacggc ccacggcttt
     1261 ggagaagctc caccgtctgc tggagcaccc caggcatgtg gagatcctgg gcttctctga
     1321 ggcagaaagg aaggaatact tctacaagta tttccacaat gcagagcagg cgggccaagt
     1381 cttcaattac gtgagggaca acgagcctct cttcaccatg tgcttcgtcc ccctggtgtg
     1441 ctgggtggtg tgtacctgcc tccagcagca gctggagggt ggggggctgt tgagacagac
     1501 gtccaggacc accactgcag tgtacatgct ctacctgctg agtctgatgc aacccaagcc
     1561 gggggccccg cgcctccagc ccccacccaa ccagagaggg ttgtgctcct tggcggcaga
     1621 tgggctctgg aatcagaaaa tcctatttga ggagcaggac ctccggaagc acggcctaga
     1681 cggggaagac gtctctgcct tcctcaacat gaacatcttc cagaaggaca tcaactgtga
     1741 gaggtactac agcttcatcc acttgagttt ccaggaattc tttgcagcta tgtactatat
     1801 cctggacgag ggggagggcg gggcaggccc agaccaggac gtgaccaggc tgttgaccga
     1861 gtacgcgttt tctgaaagga gcttcctggc actcaccagc cgcttcctgt ttggactcct
     1921 gaacgaggag accaggagcc acctggagaa gagtctctgc tggaaggtct cgccgcacat
     1981 caagatggac ctgttgcagt ggatccaaag caaagctcag agcgacggct ccaccctgca
     2041 gcagggctcc ttggagttct tcagctgctt gtacgagatc caggaggagg agtttatcca
     2101 gcaggccctg agccacttcc aggtgatcgt ggtcagcaac attgcctcca agatggagca
     2161 catggtctcc tcgttctgtc tgaagcgctg caggagcgcc caggtgctgc acttgtatgg
     2221 cgccacctac agcgcggacg gggaagaccg cgcgaggtgc tccgcaggag cgcacacgct
     2281 gttggtgcag ctcagaccag agaggaccgt tctgctggac gcctacagtg aacatctggc
     2341 agcggccctg tgcaccaatc caaacctgat agagctgtct ctgtaccgaa atgccctggg
     2401 cagccggggg gtgaagctgc tctgtcaagg actcagacac cccaactgca aacttcagaa
     2461 cctgaggctg aagaggtgcc gcatctccag ctcagcctgc gaggacctct ctgcagctct
     2521 catagccaat aagaatttga caaggatgga tctcagtggc aacggcgttg gattcccagg
     2581 catgatgctg ctttgcgagg gcctgcggca tccccagtgc aggctgcaga tgattcagtt
     2641 gaggaagtgt cagctggagt ccggggcttg tcaggagatg gcttctgtgc tcggcaccaa
     2701 cccacatctg gttgagttgg acctgacagg aaatgcactg gaggatttgg gcctgaggtt
     2761 actatgccag ggactgaggc acccagtctg cagactacgg actttgtggc tgtggctgga
     2821 tagctgtggc ctcacagcca aggcttgtga gaatctttac ttcaccctgg ggatcaacca
     2881 gaccttgacc gacctttacc tgaccaacaa cgccctaggg gacacaggtg tccgactgct
     2941 ttgcaagcgg ctgagccatc ctggctgcaa actccgagtc ctctggttat ttgggatgga
     3001 cctgaataaa atgacccaca gtaggttggc agcgcttcga gtaacaaaac cttatttgga
     3061 cattggctgc tgaatggtcc tatctgctgg ctctcccctg agatctggac agaggaagat
     3121 gggagggtgc tcatcacccc cccagcataa tgatcagcct ccttcctaga gacagactca
     3181 tgcagattga gatcaaaagt ccctctgctt gggatcaaat taatgtttga cagagctggc
     3241 caggcgtggt ggctcatgta tgtaatccta gcacttcgag aggccgaggc aggtggatca
     3301 cgaggtcagg agtttgagat tagcctggcc aagatggtga aaccctgtct ctactaaaaa
     3361 taaaaaaaaa ttagccagga aaaaaaaaaa aaaaa
//