LOCUS AY090737 5035 bp mRNA linear HUM 14-DEC-2002
DEFINITION Homo sapiens contactin 4 (CNTN4) mRNA, complete cds.
ACCESSION AY090737
VERSION AY090737.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5035)
AUTHORS Zeng,L., Zhang,C., Xu,J., Ye,X., Wu,Q., Dai,J., Ji,C., Gu,S.,
Xie,Y. and Mao,Y.
TITLE A novel splice variant of the cell adhesion molecule contactin 4
(CNTN4) is mainly expressed in human brain
JOURNAL J. Hum. Genet. 47 (9), 497-499 (2002)
PUBMED 12202991
REFERENCE 2 (bases 1 to 5035)
AUTHORS Zeng,L., Xu,J., Zhang,C., Xie,Y. and Mao,Y.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) Institute of Genetics, Fudan University,
220 Handan Road, Shanghai, Shanghai 200433, P.R.China
FEATURES Location/Qualifiers
source 1..5035
/db_xref="H-InvDB:HIT000084336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="3"
/map="3p26-p25"
/note="UG0865C01; 2772b11"
gene 1..5035
/gene="CNTN4"
CDS 222..3302
/gene="CNTN4"
/note="highly similar to rat BIG-2"
/codon_start=1
/product="contactin 4"
/protein_id="AAM00025.1"
/translation="MRLPWELLVLQSFILCLADDSTLHGPIFIQEPSPVMFPLDSEEK
KVKLNCEVKGNPKPHIRWKLNGTDVDTGMDFRYSVVEGSLLINNPNKTQDAGTYQCTA
TNSFGTIVSREAKLQFAYLDNFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFN
EYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG
VMGEYEPKIEVQFPETVPTAKGATVKLECFALGNPVPTIIWRRADGKPIARKARRHKS
NGILEIPNFQQEDAGLYECVAENSRGKNVARGQLTFYAQPNWIQKINDIHVAMEENVF
WECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNITIVNLSDAGMYQCLAENKHGV
IFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECKPKASPKPVYTWKKGRDILKE
NERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNLVVKDPTRVMVPPSSMD
VTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDGDHFERVGGQDSAGDLMIRNI
QLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNH
SPITMYVIQARTPFSVGWQAVSTVPELIDGKTFTATVVGLNPWVEYEFRTVAANVIGI
GEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFR
PYGKMIWMLTVLASADASRYVFRNESVHPFSPFEVKVGVFNNKGEGPFSPTTVVYSAE
EEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGYEVKYWRHEDKEENARKIRTV
GNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVNVTTRKPPPSQPPGNIIWNSSD
SKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIETNKTSVELSLPFDEDYIIEI
KPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTLSAISTIMISLTARSSL"
BASE COUNT 1603 a 959 c 1053 g 1420 t
ORIGIN
1 gaaaaagaac agtgtgtcat gaagacaggc acctggaggt gatttgggtg gcattcatga
61 gaaaattcac gttacccgaa tcattgacat agagtaactc cacagcatgt gtcttcaaga
121 gcttccctaa aagattaaag gttatacaaa acttaaaaga agcagcaatt ctattcgctt
181 gttattggac ttgaaactcc ctttgacctc ggaaactgaa gatgaggttg ccatgggaac
241 tgctggtact gcaatcattc attttgtgcc ttgcagatga ttccacactg catggcccga
301 tttttattca agaaccaagt cctgtaatgt tccctttgga ttctgaggag aaaaaagtga
361 agctcaattg tgaagttaaa ggaaatccaa aacctcatat caggtggaag ttaaatggaa
421 cagatgttga cactggtatg gatttccgct acagtgttgt tgaagggagc ttgttgatca
481 ataaccccaa taaaacccaa gatgctggaa cgtaccagtg cacagcgaca aactcgtttg
541 gaacaattgt tagcagagaa gcaaagcttc agtttgctta tcttgacaac tttaaaacaa
601 gaacaagaag cactgtgtct gtccgtcgag gtcaaggaat ggtgctactg tgtggcccgc
661 caccccattc tggagagctg agttatgcct ggatcttcaa tgaataccct tcctatcagg
721 ataatcgccg ctttgtttct caagagactg ggaatctgta tattgccaaa gtagaaaaat
781 cagatgttgg gaattatacc tgtgtggtta ccaataccgt gacaaaccac aaggtcctgg
841 ggccacctac accactaata ttgagaaatg atggagtgat gggtgaatat gagcccaaaa
901 tagaagtgca gttcccagaa acagttccga ctgcaaaagg agcaacggtg aagctggaat
961 gctttgcttt aggaaatcca gtaccaacta ttatctggcg aagagctgat ggaaagccaa
1021 tagcaaggaa agccagaaga cacaagtcaa atggaattct tgagatccct aattttcagc
1081 aggaggatgc tggtttatat gaatgtgtag ctgaaaattc cagagggaaa aatgtagcaa
1141 ggggacagct aactttctat gctcaaccta attggattca aaaaataaat gatattcacg
1201 tggccatgga agaaaatgtc ttttgggaat gtaaagcaaa tggaaggcct aagcctacat
1261 acaagtggct aaaaaatggc gaacctctgc taactcggga tagaattcaa attgagcaag
1321 gaacactcaa cataacaata gtgaacctct cagatgctgg catgtatcag tgtttggcag
1381 agaataaaca tggagttatc ttttccaacg cagagcttag tgttatagct gtaggtccag
1441 atttttcaag aacactcttg aaaagagtaa ctcttgtcaa agtgggaggt gaagttgtca
1501 ttgagtgtaa gccaaaagcg tctccaaaac ctgtttacac ctggaagaaa ggaagggata
1561 tattaaaaga aaatgaaaga attaccattt ctgaagatgg aaacctcaga atcatcaacg
1621 ttactaaatc agacgctggg agttatacct gtatagccac taaccatttt ggaactgcta
1681 gcagtactgg aaacttggta gtgaaagatc caacaagggt aatggtaccc ccttccagta
1741 tggatgtcac tgttggagag agtattgttt taccgtgcca ggtaacgcat gatcactcgc
1801 tagacatcgt gtttacttgg tcatttaatg gacacctgat agactttgac agagatgggg
1861 accactttga aagagttgga gggcaggatt cagctggtga tttgatgatc cgaaacatcc
1921 aactgaagca tgctgggaaa tatgtctgca tggtccaaac aagtgtggac aggctatctg
1981 ctgctgcaga cctgattgta agaggtcctc caggtccccc agaggctgtg acaatagacg
2041 aaatcacgga taccactgct cagctctcct ggagacccgg gcctgacaac cacagcccca
2101 tcaccatgta tgtcattcaa gccaggactc cattctccgt gggctggcag gcagtcagta
2161 cagtcccaga actcattgat gggaagacat tcacagcgac cgtggtgggt ttgaaccctt
2221 gggttgaata tgaattccgc acagttgcag ccaacgtgat tgggattggg gagcccagcc
2281 gcccctcaga gaaacggaga acagaagaag ctctccccga agtcacacca gcgaatgtca
2341 gtggtggcgg aggcagcaaa tctgaactgg ttataacctg ggagacggtc cctgaggaat
2401 tacagaatgg tcgtggcttt ggttatgtgg tggccttccg gccctacggt aaaatgatct
2461 ggatgctgac agtgctggcc tcagctgacg cctctagata cgtgttcagg aatgagagcg
2521 tgcacccctt ctctcccttt gaggttaaag taggtgtctt caacaacaaa ggagaaggcc
2581 ctttcagtcc caccacggtg gtgtattctg cagaagaaga acccaccaaa ccaccagcca
2641 gtatctttgc cagaagtctt tctgccacag atattgaagt tttctgggcc tccccactgg
2701 agaagaatag aggacgaata caaggttatg aggttaaata ttggagacat gaagacaaag
2761 aagaaaatgc tagaaaaata cgaacagttg gaaatcagac atcaacaaaa atcacgaact
2821 taaaaggcag tgtgctgtat cacttagctg tcaaggcata taattctgct gggacaggcc
2881 cctctagtgc aacagtcaat gtgacaaccc gaaagccacc accaagtcaa ccccccggaa
2941 acatcatatg gaattcatca gactccaaaa ttatcctgaa ttgggatcaa gtgaaggccc
3001 tggataatga gtcggaagta aaaggataca aagtcttgta cagatggaac agacaaagca
3061 gcacatctgt cattgaaaca aataaaacat cggtggagct ttctttgcct ttcgatgaag
3121 attatataat agaaattaag ccattcagcg acggaggaga tggcagcagc agtgaacaaa
3181 ttcgaattcc aaagatatca aatgcctacg cgagaggatc tggggcttcc acttcgaatg
3241 catgtacgct gtcagccatc agtacaataa tgatttccct cacagctagg tccagtttat
3301 gacaaaagtt atctgaagga cttgctgttt ataatataag caacatttag ctagttgttt
3361 tgaagacacc cagtactaag taatattgtt gttcaagtac atcttattac tggaataaaa
3421 atgttttttg cttctttacg aatggcatta tacagtactt cctcaaagca aatctagctt
3481 tgtctgaagt ttctttggaa actctgcaat gcactgaaga catctgtaat atgatgttac
3541 caaagcagtt tacatatgtc cttatatgca tattttttat tatatattta gtgttttata
3601 gaatttttta aagttaacat ataatgtaga tattaatttt ttcctcggct gtaaaatgct
3661 atgggcaaca caatcatgca attataattt gaaaatattt cctttaaaga cagagtttga
3721 aactcatctt ggtaaataaa ttgcaaatta ctcgtacagt tttacaagga tctcatggca
3781 gaacagcgga agacttggtc cgtaactcaa ggctgttgta tgcaaactac tcttctagtg
3841 gttaatgcac ttgacatgta cagtatgttt cccatgccgt tgtgattttg acatgtacag
3901 tatgttttca tgccgttgtg aattttgttg ttcaacccaa cttgagatgg tttcaggaat
3961 ggctgcaatc tcaaaagctc aatgtactgc ccaagaggca ccttgtgcaa tattcccatc
4021 cctgaattta gcattgtaca ggaagatttt cttttcactc aactgagtta gcattgtctt
4081 tgtggtagca ttatcttaga cattaaattt gaagtaacat atatcctgta gtaacataga
4141 cccaaagtta ctatagtcaa ccaagtcttt caaaggataa aagatcattt tattatcttt
4201 aactgtatct attttgaatg taaatttaaa aaaagtaatt ctctgtcaat ggattcgtaa
4261 tttctttaca aaatttctta tatataatat gtgtatctct gtaataatag agcccttctt
4321 ttgaatcaaa attacatatg gactttggaa gattgctcct atttcaacaa atagttgctg
4381 caagaatttt taatatgact ctataaaagc tctttagtac aattgtatgg tttcttgatg
4441 attctgtttt gcaataggta gcctagttgc tttatatgct ttaccttcta ggtcttaaaa
4501 tcacacattg gaaaatgaca atatcaacaa aactgtattc ttatgaaaag aactatttgt
4561 tacaatgaga aaggttttgt gagtaaaccc tactggacag tgacataaaa ggcaatggaa
4621 ttttctataa acattttctc atgtaaacat gctgccacct tttcttcttt ctcagagaac
4681 tcaaatttgc tatagtttgt catttttgct tacaaataat ataacttttc aaccttctag
4741 ttatatttat ccaataaagt cataatcggg attccatttg tgtaaaaact agggtggtaa
4801 ccggaaaaaa atattgtcag tatttcaagc tgtgttcctt tcttagtttg atatggttac
4861 ttctatgttg aaataaaatt taaaatcaca tgcaaaaaaa aaatcagcaa aataataaaa
4921 tgaacgaaaa aaaatgacac ccagggagtt cccaacccca gtgtaaatga tatttaccag
4981 tgatctagca tatgtaatct tttttaaagg tattgttaat aaatattctg tcatt
//