LOCUS AY037299 6059 bp mRNA linear HUM 01-OCT-2001
DEFINITION Homo sapiens nRip11 mRNA, complete cds.
ACCESSION AY037299
VERSION AY037299.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6059)
AUTHORS Prekeris,R., Davies,J.M. and Scheller,R.H.
TITLE Rip11 and nRip11 are Rab11/25 interacting proteins
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6059)
AUTHORS Prekeris,R., Davies,J.M. and Scheller,R.H.
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2001) Molecular and Cellular Physiology, Stanford
University, Beckman Center B151, Stanford, CA 94305, USA
FEATURES Location/Qualifiers
source 1..6059
/db_xref="H-InvDB:HIT000083552"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 441..1979
/note="KIAA0941; RAB11 and RAB25 interacting protein;
involved in regulation of polarized endosomal trafficking"
/codon_start=1
/product="nRip11"
/protein_id="AAK68635.1"
/translation="MMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSGTNDTYTIIQLGK
EKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLVGLDKFLGQVA
INLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMFDLSMKDKT
RSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPKKPFLLG
PQRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPHRRTL
SFDTSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETWDS
SMNLFSKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAF
SENRQDYFDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRS
LTYEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGK
FSNS"
BASE COUNT 1941 a 1046 c 1167 g 1905 t
ORIGIN
1 gggcgggcgg gaggcgcgga ggcagcggag gctgctcggc cgcaaggagg caggcgggag
61 gccaggggtg cagaattggg gcggggggct cccttcaccc ccgcagccct ccgcccgggt
121 ccgtgtggcc aggcctcacg tgcccgcagg cctggggaag gtggagacag gggcgggggt
181 ccgcgcagag gcctgcacgg cgcggccagg tgatggtggg cctctgtgtt tctccagacg
241 aaaggggacc cccggagcgg ccgtgcccct gggctgcccc cgcgaggcgt tttgacatca
301 gccataggga agtcggggag ccctgagcct gcctgtttcc gttaagtgtc cttaggatgc
361 agtgattaag gaattaggct ctccctccgg gaggggcact gcctgtgcta gggaactcgg
421 gggcagagaa acaggacagg atgatgctgt ccgagcaagc ccaaaagtgg tttccaaccc
481 acgtgcaggt cacagtgctc caagccaaag atctgaagcc aaaaggcaaa agtggtacca
541 atgacacata cactataatt cagctgggca aggaaaagta ctccacctct gtagctgaga
601 aaacccttga gccagtttgg aaggaggagg cctctttcga gctacctgga ttgctaattc
661 agggaagtcc agagaaatac attcttttcc ttatagttat gcacaggtcc ctggtgggtc
721 tggataaatt tttagggcag gtggcaatca atctcaatga catctttgag gacaaacaaa
781 gaaggaaaac agagtggttt agattagaat ccaaacaagg aaaacgaatc aaaaacaggg
841 gtgagataaa ggtcaatatt cagtttatga ggaacaatat gaccgcaagt atgtttgact
901 tatcaatgaa ggacaaaacc agatctcctt ttgcaaagtt aaaagataag atgaagggta
961 gaaaaaatga tggaacattt tctgatacgt cttctgcaat cattccaagt actcacatgc
1021 ccgatgccaa tagtgaattt tcaagtggtg aaatacagat gaaatccaaa ccaaaaaagc
1081 cttttctctt gggtcctcag cgactctcgt cagcgcattc aatgtctgat ttatctgggt
1141 cccatatgtc ttctgagaaa ctgaaggctg gcaccatagg tcaaacacat cttctcggac
1201 accagttaga ttcctttgga acagttccag aaagtggaag tctcaaatct ccacacagaa
1261 gaacattaag ctttgatact tctaaaatga accaacctga cagcattgtg gatgaaggtg
1321 aattgtgttt cggaagacaa aatgacccat ttacaaatgt gactgcttca ttaccccaaa
1381 aatttgcaac actgccaagg aagaaaaatc catttgaaga aagcagcgaa acatgggaca
1441 gcagcatgaa tttattttca aaaccaattg aaataagaaa agaaaataaa agagagaaaa
1501 gggagaaagt tagcctgttt gaaagagtga ctggaaaaaa agatagcaga agatctgata
1561 aacttaacaa tgggggatct gatagccctt gtgacttgaa atcacctaat gcatttagtg
1621 aaaatcgcca ggactatttt gattatgagt caaccaatcc atttacagca aaattcaggg
1681 cttcaaatat aatgccatct tcaagttttc atatgagtcc aacaagcaat gaagacctca
1741 ggaaaatccc ggacagcaac ccctttgatg ccactgcagg gtatcgtagt ctgacctatg
1801 aagaggttct acaggagctg gtgaaacaca aagaactcct taggaggaaa gacacccaca
1861 tccgggaact cgaggactac atcgacaacc tccttgtaag ggtaatggaa gaaacgccca
1921 gtattctcag agtgccatat gaaccatcca ggaaagctgg caaattctct aacagttaat
1981 aaagccaatt gtattgtatt gataattgga caaagagaga gaaagaaaga aggaaggaag
2041 gaaaaacttg ttactgaaag agactacact atcaggtttc attacatatt ctcctttatt
2101 gtgaagagta gttttacctg taaatattag cagggactat caagagtgac ctttgaagca
2161 agctaaatca tttaaatgtt taaattgaaa atgggccaga ttctcaatga ataagtggtt
2221 ccttaggact cactcaggtg ctggtactga cccactaatc tgccataggc ccagaaatat
2281 cttcagaagt acgtgagttg ttcctcagga atagattttt cataaagcag aattgatcct
2341 gtggctggtt tctcagaaat cagtttgtag aaatatttag cttcaggaat actgctcgtt
2401 ataaacacta ctaaaaaaac agtttatatt ttatatacac atatgtacat gaatatatat
2461 atattcatgt atcttgtata taaaatatag gcatatacct catatataca tgtgttttta
2521 gaacatttag aaacaattga ttgcctctaa agttaggcta ccaatttctt gatttgaaaa
2581 tgtgtgtgct ctattgatgc aagacaagtc atccttccta ctgtcatggt ttgttataga
2641 gaagctgctt caaatcactc ttgactacat ggaccttggt ttcaaagtga gctgctatat
2701 attattctag catcaaagtt tttctctttc cccaaaagtg atgatctcaa gtcctttttt
2761 aaagaatgac aaattttagg agacttcatt aacttcataa cagcatgaat ttatttgaat
2821 taattaacat ttgagtttgt ttaaggtata agcagaagat aagctaatat agcttgtttt
2881 gttgaaattc tgcatgcctt taaatcacta gcaaagcaaa tattataaag ttatatctga
2941 aaataattgt gggaagtatg tgattgcctg gtgtgtctga taacccaaag cagcgggcag
3001 attccaggaa tgaagaatta ggcttggttt caggttacat aaataataga gcagatggtt
3061 gcctttgggt cttgaaccaa aataagactt actaaaggaa gagtgagttt ttagaagaga
3121 actttacgag cgtgacatta tgcattactc cacatccacc ctttaagaat tgatttatta
3181 caaaattatg ttctatttta aagtccactc ccccaaaata ctgatttctt ccatggatta
3241 tttttatatg atttgtacaa attttttctg aaatttaagt tgacaagcaa tgttataaaa
3301 atattgctaa tcttctgctt atttttcagc ctttaaagtc tgaaatacta taaaacactg
3361 agagtatcta tgtctttctg aatttaaaat gaaaattcat gtccatatgg agacttacat
3421 attccccaat ctttccatga attgcatttt tttctaatac ttatctctgt taagactcca
3481 ttgaaagtta aacaaaaagc cgatataata gtttgggttt tttttttttg cttattttag
3541 tattttgaat cagagaatac ttggccaagc tcgtatttgt aaactaaaac cccttgttat
3601 ttgtatcttc tgcatttcag ttttactgta agaacataca ttttgaaatt atgaacattt
3661 ttttcataaa aattaaatgc tttaagaaat ggagaaggaa aaatagcttt tatcaatttt
3721 tttctcctca agattctgta ataaacctca aagtctggtg tagaatggta ttttcccgtt
3781 tgaggtcttg gtagtttttt tttttttttt aaacatggtg ccacttttaa ttaactaaat
3841 gttacaaaat tctcagcatt tgtttttgtc tggtagtatt attgagtctt ttcatacact
3901 tcttaaaatg tgaaaatcta tgttttcagt attatgacag tatctgcaga tactataata
3961 atatgctttg gccaaatttg ctgtttatag agtgaaccaa gatgtcagtt ttgtattggg
4021 gatatgtttt acataaatag aactcattta aaagtatggt tcaagtactg ctcttctttt
4081 tatggggaaa ttgattttta aggagcgatt cttttcctat ataaaagcta ttgaggctta
4141 gctttattca tacatgagtg atttggttat aactcaatca aaatttttat ctttaaatct
4201 gagacaagta ttatatttaa aactagatct attaatacat tcatcactgc ctgaaaattt
4261 gctgttctaa tgtttgtgaa ttttcactca ttacctagag taaacttatt gcatattttc
4321 ataatcagtc aaaataataa aactaaaaac aaaaagtaaa aattagttcc caagtaaata
4381 tatcagtgtt tcctgtgttt gggcagaagt gcaaagtagt tttaatttct cacgttgtag
4441 aaaaagaggc caaaaaggtc accttagttt atttttccaa aacataactt taggtattct
4501 aatgtatttt gttagttgct tagaaatgga aataaaatat atgtgcttat taaataatgc
4561 acagtacact agattataga gtttattttt gcttttatgc tttaaagaat gcatgcccaa
4621 aacactacta ccaacaggag gattttttaa aatcacagaa ttgatattta tctcaagact
4681 atcttaagct aatgtacttc tgttacataa ttaaactatt tctgctatta tttttaaagc
4741 agtattattt tataaccaat tctaaaattc agctttaaaa atattgaaca taccttccta
4801 ccacttacgc ttcaagtttc atttattgaa taccagggtc atatcttaga attgtatata
4861 aaacaacatg taacccattc atgaaaaacg tttttaagta ttgctttttg ctgctatgtt
4921 ctgcattgag cctagttttg ccattgtccc ctgaatgtag tattatctat agattataca
4981 taactacatc tattgctttt ggtggtaaat caagatttag ttgtaatttt ccagctgtga
5041 aaatgttgcc ttgtatttaa aagggtttca tgaatggaaa cctaagtaaa actaagctca
5101 ttagtgacag acttgttttc ttcttgttat tcctccagca actccctcac caccacgcct
5161 ccctgcctac catccccgga agggtgctta ttctttaaca aagagaatct aaaaaaaaaa
5221 acaaaaaact gttgtctaat atatctacag taaatgttac actagagctt ttattttcct
5281 ctgtagcttt tcagaagaag caatttacct tggatttgta aatcaagctg aaactttttt
5341 gatgttcatg tactcatatg tcttgtaggt ggtaggtgtc acttgtgtgt atgtgtaagt
5401 gaagtatgat gcatgctcat tcacttggtc cctttgaaat aagggaaagg atcacagtgc
5461 tgctgggcca tgatggtatg tagaagggtc tgtcagcaca catggaaagc ccccatttgc
5521 acagatgtag aactttaata atccagatgc aatcattgga agtatttaat atgcaattgg
5581 tagcacctta gctaattaat ctgcatatga agcattttct gatatattta ataagaggta
5641 tagaagctct tcaagcatta aaatagagtt gatgtttcat tccatttgtt ttatccatca
5701 aaaaatgcac tctcacagtg gagttgaagt ctaatacatg atacatgtgg gcctgttagt
5761 cttcgaagct tccagatggt ttgtgttttg aggtacaaaa aaatgctgca gatctagaaa
5821 tgcatatatt tagcgggtat ttgaaagata gaagcattat ttataactga agagtataac
5881 acttatcttc ttaagtaaat gctctcataa cttgtataca tttttgcagg tacaaattca
5941 aaagtatgta agcattgtat aatgtgacaa ttgtataatt tatgtaatct gatgcatgaa
6001 tcagaatttt tatataatat atgattattg acttatagtt gattaaagtg tttaaactt
//