LOCUS AL834263 5252 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp761K187 (from clone DKFZp761K187).
ACCESSION AL834263
VERSION AL834263.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5252)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the
Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
sequencing consortium of the German Genome Project.
This clone (DKFZp761K187) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp761K187
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..5252
/db_xref="H-InvDB:HIT000028993"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="761 (synonym: hamy2). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp761K187"
/tissue_type="amygdala"
/note="PHD finger protein 2 isoform a"
/db_xref="taxon:9606"
CDS <2..3304
/codon_start=1
/gene="DKFZp761K187"
/product="hypothetical protein"
/db_xref="GOA:O75151"
/db_xref="H-InvDB:HIT000028993.17"
/db_xref="HGNC:HGNC:8920"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR003347"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR019786"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR041070"
/db_xref="PDB:3KQI"
/db_xref="PDB:3PTR"
/db_xref="PDB:3PU3"
/db_xref="PDB:3PU8"
/db_xref="PDB:3PUA"
/db_xref="PDB:3PUS"
/db_xref="UniProtKB/Swiss-Prot:O75151"
/protein_id="CAD38938.1"
/translation="ATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDI
DIYHCPNCEKTHGKSTLKKKRTWHKHGPGQAPDVKPVQNGSQLFIKELRSRTFPSAED
VVARVPGSQLTLGYMEEHGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDV
TDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVE
NYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASAN
ISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGH
FLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGKHLLEAFKGSHKSGKQLPP
HLVQGAKILNGAFRSWTKKQALAEHEDELPEHFKPSQLIKDLAKEIRLSENASKAVRP
EVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSKIPKPP
KPPKPPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKA
TKSVLSVPNKDVVHMQNDVERLEIREQTKSKSEAKWKYKNSKPDSLLKMEEEQKLEKS
PLAGNKDNKFSFSFSNKKLLGSKALRPPTSPGVFGALQNFKEDKPKPVRDEYEYVSDD
GELKIDEFPIRRKKNAPKRDLSFLLDKKAVLPTPVTKPKLDSAAYKSDDSSDEGSLHI
DTDTKPGRNARVKKESGSSAAGILDLLQASEEVGALEYNPSSQPPASPSTQEAIQGML
SMANLQASDSCLQTTWGAGQAKGSSLAAHGARKNGGGSGKSAGKRLLKRAAKNSVDLD
DYEEEQDHLDACFKDSDYVYPSLESDEDNPIFKSRSKKRKGSDDAPYSPTARVGPSVP
RQDRPVREGTRVASIETGLAAAAAKLSQQEEQKSKKKKSAKRKLTPNTTSPSTSTSIS
AGTTSTSTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSLADHEY
TAAGTFTGAQAGRTSQPMAPGVFLTQRRPSASSPNNNTAAKGKRTKKGMATAKQRLGK
ILKIHRNGKLLL"
BASE COUNT 1311 a 1424 c 1409 g 1108 t
ORIGIN
1 ggcgacggtg cccgtgtact gcgtctgccg gctcccctac gacgttaccc gcttcatgat
61 cgagtgcgac gcctgcaagg actggttcca cggcagctgt gttggggtgg aagaggagga
121 ggcgcccgac atcgacatat accactgccc aaactgtgag aaaacccatg ggaagtccac
181 cttaaagaag aagcggacct ggcacaaaca cggcccgggg caagcgcctg acgtcaagcc
241 cgtgcagaat ggcagccagc tcttcatcaa ggagctgcgg agccggacct ttcccagtgc
301 tgaagacgtg gtggcccgtg tgccaggaag tcagctcacg ctgggctaca tggaggagca
361 cggcttcacc gagcccatcc tcgtccctaa gaaagacggg ctgggtctgg ctgtcccggc
421 ccccacgttc tatgtcagtg acgtcgagaa ctacgtgggg ccggaacgga gtgtggatgt
481 gacagatgtc accaagcaga aggactgcaa gatgaagctg aaggagtttg tggactatta
541 ctacagcacc aaccgcaagc gggtcctcaa cgtcaccaac ctcgagttct ctgacacccg
601 aatgtccagc ttcgtggagc cacctgacat tgtaaagaaa ctgtcatggg tagaaaacta
661 ctggccagat gatgcattgc tggccaagcc caaagtgacc aagtactgcc taatctgcgt
721 gaaggacagt tacaccgact tccacatcga ctctgggggc gcctctgcct ggtaccacgt
781 gctcaagggg gagaagacct tctatctcat caggccggcc tcggccaaca tctccctgta
841 tgagcgctgg cggtctgcct ctaaccacag cgagatgttc tttgctgacc aggtcgacaa
901 atgctacaag tgcatcgtca agcagggcca gaccctcttc atcccctcag gctggatcta
961 cgccacactc acccctgtgg actgcctggc cttcgcggga catttcctcc acagcctgag
1021 tgtggagatg cagatgagag catatgaagt ggaaaggagg ttgaaactgg gcagcctgac
1081 tcagtttccc aactttgaaa ctgcgtgctg gtacatgggg aagcacctgc tggaggcatt
1141 caaaggctct cacaaatctg ggaagcagct gccccctcat ctagtccaag gagctaaaat
1201 tctcaatggt gctttccgat cgtggacgaa gaagcaggct ttggcagagc atgaggacga
1261 gctcccggag cacttcaaac cttcacagct aatcaaagac ctggccaaag agatccggct
1321 cagtgagaat gcctccaaag ccgtccgacc ggaagtgaat actgtcgcct cgtcagatga
1381 ggtgtgtgac ggggaccggg agaaggagga gcccccgtct cccattgagg ccaccccgcc
1441 tcaatccctc ctggagaaag tgtccaaaaa aaagactccc aaaactgtga agatgcccaa
1501 gccatccaaa atccccaagc ccccgaagcc ccctaagccc ccaaggcccc ccaaaacgct
1561 gaagctcaaa gatggaggca agaagaaagg gaagaagtcc cgggagtcag cctcacccac
1621 catccccaac ctggacctgc tcgaagccca caccaaggag gcactgacca agatggagcc
1681 gcccaagaag ggcaaggcca caaagagtgt cctgagtgtg cccaacaaag atgtggttca
1741 catgcagaat gatgtggaga ggctggaaat tcgagagcaa accaagagca agtcagaggc
1801 caagtggaag tacaagaaca gcaaacctga ctccttactg aagatggaag aggagcagaa
1861 gctagagaag tcgcctctag ctggaaacaa agacaataag ttctcttttt ctttctccaa
1921 caagaaactc ctcggctcca aggctctcag gcccccgacg agccctggtg tgttcggggc
1981 cttgcagaac ttcaaggagg acaagcccaa gcccgtgcgg gatgagtatg agtacgtgtc
2041 ggatgacggt gagctcaaga tcgacgagtt tcccatcagg aggaagaaaa acgccccgaa
2101 aagggacttg tccttcttgt tggataagaa ggctgtgctg cccacgcctg tcacgaagcc
2161 aaagctggac tcggcagcgt acaagagtga tgactcctcg gacgagggtt cgctgcacat
2221 cgacacagac accaagcccg gccgcaatgc cagagtcaag aaggagagtg ggagctcggc
2281 agctggcatc ttggacctgc tgcaggccag tgaggaggtt ggcgcgctgg agtacaaccc
2341 cagcagccag cccccggcct cccccagcac acaggaagcc attcagggaa tgctgtccat
2401 ggccaacctg caggcctccg actcctgcct gcagaccacg tggggagctg gccaggccaa
2461 ggggagctcg ctggctgccc atggtgcccg gaagaatggg ggtggcagtg gcaagagtgc
2521 aggcaaacga ctgctgaaga gggctgccaa gaacagtgtc gacctggacg actacgagga
2581 agagcaggac cacctggatg cctgcttcaa ggactcagac tacgtttacc cctcactgga
2641 gtcagatgaa gacaacccca tctttaagtc ccggtcgaag aaaaggaaag gctcagacga
2701 cgctccctac agcccaacag caagggtcgg cccatcggtg ccaagacagg acaggcctgt
2761 gcgtgagggt acacgggtgg cttccatcga gaccgggctg gcggctgctg cagctaagtt
2821 gtcccagcag gaggagcaga aaagcaagaa aaaaaagagt gccaagagga agctgactcc
2881 taacaccacc tccccttcca cctccacctc catctctgcc ggcaccacct ccacctccac
2941 cacgccagcc tctaccaccc ctgcctccac cacaccggcc tccaccaccc cggcctccac
3001 cagcacggcc agcagccagg cctcgcagga gggcagctcg ccagagcccc cgcctgagtc
3061 gcatagcagc agcctggcgg accatgagta cacagccgct ggcaccttca ccggggccca
3121 ggctggccgc acctcccagc ccatggcccc tggggtcttt ctcacacaga ggcggccctc
3181 cgcatcgtct ccaaacaaca acaccgctgc caaaggaaaa cgtacgaaaa agggcatggc
3241 gaccgccaag cagaggcttg ggaaaatttt gaaaattcat cggaacggga aactactcct
3301 ttaagatttg gaaagccagg atccttctgc tccgctcagg acccccggag ccccgcgaaa
3361 acatctgcct cccaggaggg tgccgagctg cctcaccagg gagggccttg cctcttcccg
3421 gctgccatct ccccaacaag cgtctgtccc ttcagccggc agagcgagcc cagcgtggcc
3481 cctcaatttg aaaatggacg tcttttctca agttgctaag agtgatctgt cccagaaaag
3541 cggccctgca agtttgagga ccgcttattc cactttaagg acagccttca ggccccctga
3601 gcgtgggtgt gattgcaggg cctctgcagc tctgctgaga gcatgagtcc ttcaaggaag
3661 acagagtgag ccagtgctca ccagccccag agtcagagct ggccacaggc tggcagcctc
3721 caggggctta aaaaaaaagg caaagaacac agaaagagga ggagcaagtg ggatgtttat
3781 gtcccccctt ctcttcctga gtgattctca gccaagtcca gacagtgctc ggcgggtgag
3841 gaagggtctg ccccgagctt tctggttggc aggtggcagc aggatggtgg gtgttcagcc
3901 tgaatgccca ggagcatttc tggggggcag ctaagactgg cagctgggtt ggtgtgttag
3961 cgggcagggg agccattgtg gggtccccag gaaagggcaa gggctcagcc acatcttggg
4021 gtctgggagg cccaggctaa gccatgtggc agggaccgtc ttgccctgct ggccacactc
4081 tggagaagca cttctcagcc aaggcacccc tgccctggga ctggcagggc aggggcaggg
4141 gcagggacag tggacaggcg gcccgaggac ttacggtcgg cacttctctg ttctcccgtg
4201 tcagcgtgtg gtgtcgcctg catgggtcgt acctggatgg tgtgtccacc atcgacacgg
4261 aggggctgga tttgtttctc aggcaatcct gtattttaat tttagatgta tttcctgaag
4321 catatttttc atagaatgta gcgtgtaaat agctttttaa ataacttctt ttttataaga
4381 gtaaaagtat ctttaggaat ttctttctat agagttcttc attaacattt atacgagttt
4441 ttttgctgag tcagatggac agttgggttc tgatgctttt tccttctcct ttccttttat
4501 tattattatt tttttctttt aagaactaag gtattgcctg aaaaacaagt gatgtctgtg
4561 cagccttaca ctctgtcttt acagaagcaa atagtacaca aaagatctat ttcagacaca
4621 ttttgaagat gaatcttcaa ctttaatacc agctctttgt tttccttgta tgatgagggg
4681 attgggggat acagttattt tactagcacc ttgtgaagtg tttccgtgtt ttgtgatgct
4741 gtaatttatt aatgtttgta gctttttata tttgtacatt tcttatgagc tttgtttata
4801 tacccattac ctggatgttt ttgtccactg ggagaggcag cttggtggag gccttatcca
4861 ctcccacttg tcctgtttgg agggacgcag tccctagggc ccgagactgg gtgggagagg
4921 gggagtctca cggggcccca ggcttattca gaactggtgt ttttaaagtt tcctttaccc
4981 tgcccttgtt gaacatttat ataatctaac ctggacatca agctgttctc tctctctctt
5041 ttttttaatt ttattattat tattttggca acatgtacat ttctaacaaa gtttatcgtg
5101 gctattaaag tgttttattt cccaattcat attactcttg tatcgagtcc atgaggtcta
5161 aggcaactta gatcaaagtt ttaaaaaagt aaaaatattt caggttttgt acaaaaaaaa
5221 aaaaaaaaaa aagaaaaaaa aaaaaaaaaa aa
//