LOCUS AL834242 4053 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564H223 (from clone DKFZp564H223).
ACCESSION AL834242
VERSION AL834242.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4053)
AUTHORS Wambutt R., Heubner D., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Agowa (Berlin/Germany) within the cDNA sequencing
consortium
of the German Genome Project.
This clone (DKFZp564H223) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564H223
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4053
/db_xref="H-InvDB:HIT000028972"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564H223"
/tissue_type="brain"
/note="E3 ubiquitin ligase SMURF1, N-terminus truncated,
differentially spliced"
/db_xref="taxon:9606"
CDS <1..888
/codon_start=1
/gene="DKFZp564H223"
/product="hypothetical protein"
/db_xref="GOA:Q8NDD8"
/db_xref="H-InvDB:HIT000028972.16"
/db_xref="InterPro:IPR000569"
/db_xref="InterPro:IPR035983"
/db_xref="UniProtKB/TrEMBL:Q8NDD8"
/protein_id="CAD38919.1"
/translation="GGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHG
HYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNA
FGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHL
LKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARL
LQFVTGSTRVPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYE
ELYEKLLTAVEETCGFAVE"
BASE COUNT 991 a 1007 c 1005 g 1050 t
ORIGIN
1 ggggggctct tccagtattc tacggacaat atttacatgt tgcaaataaa tccggattct
61 tcaatcaacc ccgaccactt gtcttatttc cactttgtgg ggcggatcat ggggctggct
121 gtgttccatg gacactacat caacgggggc ttcacagtgc ccttctacaa gcagctgctg
181 gggaagccca tccagctctc agatctggaa tctgtggacc cagagctgca taagagcttg
241 gtgtggatcc tagagaacga catcacgcct gtactggacc acaccttctg cgtggaacac
301 aacgccttcg ggcggatcct gcagcatgaa ctgaaaccca atggcagaaa tgtgccagtc
361 acagaggaga ataagaaaga atacgtccgg ttgtatgtaa actggaggtt tatgagagga
421 atcgaagccc agttcttagc tctgcagaag gggttcaatg agctcatccc tcaacatctg
481 ctgaagcctt ttgaccagaa ggaactggag ctgatcatag gcggcctgga taaaatagac
541 ttgaacgact ggaagtcgaa cacgcggctg aagcactgtg tggccgacag caacatcgtg
601 cggtggttct ggcaagcggt ggagacgttc gatgaagaaa ggagggccag gctcctgcag
661 tttgtgactg ggtccacgcg agtcccgctc caaggcttca aggctttgca aggcgcggca
721 gggccccggc tgttcaccat ccacctgata gacgcgaaca cagacaacct tccgaaggcc
781 catacctgct ttaaccggat cgacattcca ccatatgagt cctatgagga gctctacgag
841 aagctgctga cagccgtgga ggagacctgc gggtttgctg tggagtgaaa agcaaccaaa
901 ggcaacagag tctagctcat ggccaccaga ccaaaagcat ccagcttctg tgcacctcct
961 gcaaagctgg cagaggccct ggaattccag atcacctgag gggaaagggt tgtctctctc
1021 ctttctgttg ggggaggggg atgggggact tttgttggcg gctcccaccc atatatccct
1081 cctttaccat agtactccca cccacttcca tcacccatcc aataaaatgc agccaggttt
1141 agcctttggc tttggtcaca caggatattc tgttgtgttg caacccatgt ggtgataagg
1201 ctcacagccc tgagctcttt acgggagcat caactcacag ttaggggact gggcgtggct
1261 gattgagggt ttggaactgg tggctatgcc agctattcca tctcaaaaca gccttgaggc
1321 cccttttcaa tttgagcagc tgctagatat cttatcagag ctcagattcc agatttcaca
1381 tcccagcagc cggttctggg tagcagatca atttccaact ggaaaataac tatataatgt
1441 atgcttattg gaattctgcc acagcaggaa gcttgagtca aaatgtgttt cccctttgaa
1501 aggagaagga attggagcag cttttcctgg aggcccagga tatttctttt ctgggtatct
1561 tggctgaaaa ttttgtttta catagagaaa aacgatcttt taagggtccc ttttgctgca
1621 ttatctgtcc agtttgactt ttttttcagt gaaaacacca tgtcatggag tgtaggaaag
1681 agcagaccaa aatcagccct agagccaacc agtcagtccc aaagctgtga cctctgtgcc
1741 actgttgtcc atagaagagc atcgactgtg tcacttaaaa tattagtaaa ccatgatgca
1801 gcaactgcta agagctaaac taacaaaatt gtgtcatcat agctgctggc ttggtgtgaa
1861 ctcgcttaaa agcaatggtg aaaggataac ctcgatgatg taaatccacc caaagatact
1921 gttctacaaa aagtagggtg tggacgcaaa cctgtgacag cagaggggga cgacttcaca
1981 ctcactgcct catgtggccc ctttcccagt ggcagctggt gacactaacg attgctactc
2041 ggttcacttg cccagatgtc ttcatatgat gagcaaggcc agaagcaagg ctagattcga
2101 agtttctgac accatttcca gtttgcacaa aagtcagtat tttatcttaa agtggcttga
2161 tttccaatag ctgaacttgg gcagaaaaca gcaggccaat gttcctatgt ggtttctttg
2221 ttgttgtttt tgtttggggt gggggcaagt acagggtaat tcatgagcaa gacatttcac
2281 tgctgtcgaa gtctctggga tcccgctgtg ggtctgagat ggcctgggaa ggaccttgtg
2341 gacaatggtt ttatctgttc tttttgtcac tgttaatttc tgggctgctg aggttctaga
2401 atagaagggc tgccaaatga ggtttgctgc aggaggaaag tttaatcccc cattccaaaa
2461 gtccaggcca aatggtgggc ttagcctctt tgaaaagttc tgccttgccc ccacaggtgg
2521 gcacatcctg tgtctcattc accatgatgc ttcctgaggg tgttctagaa gcccgttccc
2581 cagtggctgt atccagcctt tccttgcatc atcttcctct tgaaggtgag gaagtgaaaa
2641 ctacagacct cccccggaca gcccactctc tatcacgagc ctaacccgcg ggaggcggaa
2701 gagacatcca ttcgagaact gaagcggcct ccgggatgag gtcagaggcc ccacctgatt
2761 ttcctggtgg tggtatccaa aatcttcagt aactaggaag gaaaccaggg tctcatggtt
2821 taaaagactt tgaagcagga atgttgcatt tgacgccttt aaaactacct ttttgctgtt
2881 gggaggagtc gggggcgagc cttagcagct gcaccgccat ccccatgctg gttggtgctg
2941 ccctgcctct cgtgccgggt gttgcttcag cccagagcca gagggctggg tcccgggtcc
3001 tccacaggtg accccggtgg acacacgcgt tcccatcctg gcctccgtct ctgcttttcc
3061 acttctacct gcgtgtgggt ttgccgcctt gtcatcggtt gtgtgagtgt cgcagacctt
3121 tccagagctc cggttcactc tttccaaaca ggcctccctg tcggtggcac tgcactccta
3181 gaaccttcag tttctacgat ggtttgtttg gtccttttga accaccccaa agaactcaac
3241 atggcaaagc taatggtaaa agcttcccga ctgttctact ttgggtccgc gcgaagccca
3301 ctcacgtgtg atctgtgttg cccctctcgg tggtcccagg cgatccagcc atgccccctg
3361 cccctctgcc cagatgcttc aggggcccgg cttttcaggc ttgccctcac cagcggccgt
3421 cagccgacac tcagggatgt agctaacacc actccgccag tgctttcagt aggaagagct
3481 gaggctgcct gggaggcccg gggcgaccgg aaaagggctc tctcaagttc tgaaaagaga
3541 atctgccacc agatcgaatt tcgacccctg agcttgttcg gacgtatggt ccaaattcag
3601 attaaggtgg tcacccaacc cgagatgtca ggaaaggcct tctgcagaga aaatgtcccc
3661 ccacccgcca tctgcagcca ggtgtgtgcc acacggcagc cttcccgaaa catagtatgg
3721 attttaaaaa tgtgtttatt tttgtttctc aaccacttta taacgtattt tttaatttat
3781 tttgtaatgt cttgttttga agtattgctg ctatccttgt tatccttccc actgttttta
3841 tcactgattt attttgtgaa agttgtacac taatgttcta tgtcaaaatc aaaagtattt
3901 aatgaaatac tagttctatt taatgtggtt atggaaccag ctggaaacac aaaacaaaca
3961 gtgattgtac agcaggctgg gcccaggagg tcaggttcat tttgttacat atgcaataaa
4021 ctcacgactt tacaaaaaaa aaaaaaaaaa aaa
//