LOCUS AL833963 2144 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp547O175 (from clone DKFZp547O175).
ACCESSION AL833963
VERSION AL833963.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2144)
AUTHORS Blum H., Bauersachs S., Mewes H.W., Weil B., Wiemann S.
JOURNAL Submitted (10-JUL-2002) to the INSDC. GSF, Institut fuer
Bioinformatik MIPS, Ingolstaedter Landstr. 1, 85764 Neuherberg,
Germany
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by LMU (Ludwig Maximilians University,
Munich/Germany) within the cDNA sequencing consortium of the
German Genome Project.
This clone (DKFZp547O175) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..2144
/db_xref="H-InvDB:HIT000028836"
/organism="Homo sapiens"
/chromosome="12"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="547 (synonym: hfbr1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp547O175"
/tissue_type="brain"
/db_xref="taxon:9606"
CDS join(<1..393,393..1361)
/codon_start=1
/gene="DKFZp547O175"
/product="hypothetical protein"
/note="similarity to TAP-like ABC transporter (Rattus
norvegicus)"
/note="The frame shift was determined manually"
/db_xref="GOA:Q8NDJ1"
/db_xref="H-InvDB:HIT000028836.16"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011527"
/db_xref="InterPro:IPR017871"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR030254"
/db_xref="InterPro:IPR036640"
/db_xref="InterPro:IPR039421"
/db_xref="UniProtKB/TrEMBL:Q8NDJ1"
/protein_id="CAD38811.1"
/translation="RTRGRPPRLRASLGAAGHRPSRRLGPRCRSCSPTPSPTWPSSWP
PPSSSSWQLWERPSCPTTRAAPLMASSSRKAWISSARLSSSCACWPLAGIRGGIFTLI
FARLNIRLRNCLFRSLVSQETSFFDENRTSLSWQLSLVTFMGFPIIMMVSNIYGKYYK
RLSKEVQNALARASNTAEETISAMKTVRSFANEEEEAEVYLRKLQQVYKLNRKEAAAY
MYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVLGDCMENVSFSLS
PGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQE
PVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGG
QKQRVAMARALVRNPPVLILDEATSALDAESEYLVSHRVVGNAGAGAAPGGQSPHRPA
DGC"
polyA_site 2125
BASE COUNT 486 a 606 c 647 g 405 t
ORIGIN
1 cggacgcgtg ggcggccacc gaggctgagg gcttccctgg gagcggccgg ccaccgcccg
61 agcaggcgtc tggggccacg ctgcagaagc tgctctccta caccaagccc gacgtggcct
121 tcctcgtggc cgcctccttc ttcctcatcg tggcagctct gggagagacc ttcctgccct
181 actacacggg ccgcgccatt gatggcatcg tcatccagaa aagcatggat cagttcagca
241 cggctgtcgt catcgtgtgc ctgctggcca ttggcaggta ttcggggcgg catttttacc
301 ctcatatttg ccagactgaa cattcgcctt cgaaactgtc tcttccgctc actggtgtcc
361 caggagacaa gcttctttga tgagaaccgc acagcctctc atggcagctc tccttggtca
421 ccttcatggg cttccccatc atcatgatgg tgtccaacat ctacggcaag tactacaaga
481 ggctctccaa agaggtccag aatgccctgg ccagagcgag caacacggcg gaggagacca
541 tcagtgccat gaagactgtc cggagcttcg ccaatgagga ggaggaggca gaggtgtacc
601 tgcggaagct gcagcaggtg tacaagctga acaggaagga ggcagctgcc tacatgtact
661 acgtctgggg cagcgggctc acactgctgg tggtccaggt cagcatcctc tactacgggg
721 gccaccttgt catctcaggc cagatgacca gcggcaacct catcgccttc atcatctacg
781 agtttgtcct gggagattgt atggagaatg tctccttcag cctgtccccc ggcaaggtga
841 cggccctggt ggggccctcg ggcagtggga agagctcctg tgtcaacatc ctggagaact
901 tctaccccct ggaggggggc cgggtgctgc tggacggcaa gcccatcagc gcctacgacc
961 acaagtactt gcaccgtgtg atctccctgg tgagccagga gcccgtgctg ttcgcccgct
1021 ccatcacgga taacatctcc tacggcctgc ccactgtgcc tttcgagatg gtggtggagg
1081 ccgcacagaa ggccaatgcc cacggcttca tcatggaact ccaggacggc tacagcacag
1141 agacagggga gaagggcgcc cagctgtcag gtggccagaa gcagcgggtg gccatggccc
1201 gggctctggt gcggaacccc ccagtcctca tcctggatga agccaccagc gctttggatg
1261 ccgagagcga gtatctggtg agtcacaggg tggtgggcaa tgcgggggca ggagcggctc
1321 caggtggcca gagcccccat cgcccagcag atggatgctg agaagagacg ggccccagga
1381 gctctcccag actatcagcc tcctgggctg gtgaattcct ggtgttgaga gtggggagcc
1441 aggagccact ctggacccag cctccaggct ccaggcagag ctgtatggtg tggggcaaga
1501 gaaggcatca gaatggggag acctgggtca tgagtggtgg cttacacctg taatcccagc
1561 actttgggag gccgaagcag gtggatcacc tgaggtcagg agttgcagac cagcctggcc
1621 aacatggtga aaccccatct ctactagaaa tacaaaaact agccaggtgt ggtagcacat
1681 gcctatagtc ccagctactt gggaggctga ggcaggagaa ttgcttgaac ctgggaagtg
1741 gaggttgcag tcagccgaga ttgtgccact gcactccagc ctgggcgaca gagccagact
1801 ccatctggct caaacaaaca gacaaaacaa aacaaaataa aataggccca gtatgatggc
1861 tcatgcctat aatcccagca ctttgggagg ccaaggcagg tggatcactt gaggtccgga
1921 gttcgagaca agcctggtca atacagtgaa accctgtctc tactaaaaat acaaaaatta
1981 gctgggcgtg gtggtgcatg cctgtaaccc cagctactcg ggaggctgag gcaggagact
2041 cacttgaacc cgggagatgg aggttgcagt gagctgagat tgtgccactg cactctagcc
2101 tgggcgacag agtgagactc catctacaaa aaaaaaaaaa aaag
//