LOCUS AL833924 5025 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434D2011 (from clone DKFZp434D2011).
ACCESSION AL833924
VERSION AL833924.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5025)
AUTHORS Duesterhoeft A., Lauber J., Mewes H.W., Weil B., Wiemann S.
JOURNAL Submitted (10-JUL-2002) to the INSDC. GSF, Institut fuer
Bioinformatik MIPS, Ingolstaedter Landstr. 1, 85764 Neuherberg,
Germany
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by Qiagen (Hilden/Germany) within the cDNA sequencing
consortium of the German Genome Project.
This clone (DKFZp434D2011) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5025
/db_xref="H-InvDB:HIT000028797"
/organism="Homo sapiens"
/map="7q34-q36"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434D2011"
/tissue_type="testis"
/db_xref="taxon:9606"
CDS <1..3102
/codon_start=1
/gene="DKFZp434D2011"
/product="hypothetical protein"
/note="similarity to ALR protein (Homo sapiens)"
/db_xref="GOA:Q8NEZ4"
/db_xref="H-InvDB:HIT000028797.18"
/db_xref="HGNC:HGNC:13726"
/db_xref="InterPro:IPR000637"
/db_xref="InterPro:IPR001214"
/db_xref="InterPro:IPR001841"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR003616"
/db_xref="InterPro:IPR003888"
/db_xref="InterPro:IPR003889"
/db_xref="InterPro:IPR009071"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR034732"
/db_xref="InterPro:IPR036910"
/db_xref="InterPro:IPR037877"
/db_xref="InterPro:IPR041967"
/db_xref="InterPro:IPR041968"
/db_xref="PDB:2YSM"
/db_xref="PDB:2YUK"
/db_xref="PDB:3UVL"
/db_xref="PDB:4ERY"
/db_xref="PDB:5F59"
/db_xref="PDB:5F6K"
/db_xref="PDB:6MLC"
/db_xref="UniProtKB/Swiss-Prot:Q8NEZ4"
/protein_id="CAD38780.1"
/translation="GVSDYYSQLIYKQNNLSNPPTPPASLPPTPPPMACQKMANGFAT
TEELAGKAGVLVSHEVTKTLGPKPFQLPFRPQDDLLARALAQGPKTVDVPASLPTPPH
NNQEELRIQDHCGDRDTPDSFVPSSSPESVVGVEVSRYPDLSLVKEEPPEPVPSPIIP
ILPSTAGKSSESRRNDIKTEPGTLYFASPFGPSPNGPRSGLISVAITLHPTAAENISS
VVAAFSDLLHVRIPNSYEVSSAPDVPSMGLVSSHRINPGLEYRQHLLLRGPPPGSANP
PRLVSSYRLKQPNVPFPPTSNGLSGYKDSSHGIAESAALRPQWCCHCKVVILGSGVRK
SFKDLTLLNKDSRESTKRVEKDIVFCSNNCFILYSSTAQAKNSENKESIPSLPQSPMR
ETPSKAFHQYSNNISTLDVHCLPQLPEKASPPASPPIAFPPAFEAAQVEAKPDELKVT
VKLKPRLRAVHGGFEDCRPLNKKWRGMKWKKWSIHIVIPKGTFKPPCEDEIDEFLKKL
GTSLKPDPVPKDYRKCCFCHEEGDGLTDGPARLLNLDLDLWVHLNCALWSTEVYETQA
GALINVELALRRGLQMKCVFCHKTGATSGCHRFRCTNIYHFTCAIKAQCMFFKDKTML
CPMHKPKGIHEQELSYFAVFRRVYVQRDEVRQIASIVQRGERDHTFRVGSLIFHTIGQ
LLPQQMQAFHSPKALFPVGYEASRLYWSTRYANRRCRYLCSIEEKDGRPVFVIRIVEQ
GHEDLVLSDISPKGVWDKILEPVACVRKKSEMLQLFPAYLKGEDLFGLTVSAVARIAE
SLPGVEACENYTFRYGRNPLMELPLAVNPTGCARSEPKMSAHVKRFVLRPHTLNSTST
SKSFQSTVTGELNAPYSKQFVHSKSSQYRKMKTEWKSNVYLARSRIQGLGLYAARDIE
KHTMVIEYIGTIIRNEVANRKEKLYESQNRGVYMFRMDNDHVIDATLTGGPARYINHS
CAPNCVAEVVTFERGHKIIISSSRRIQKGEELCYDYKFDFEDDQHKIPCHCGAVNCRK
WMN"
regulatory 4987..4992
/regulatory_class="polyA_signal_sequence"
polyA_site 5005
BASE COUNT 1425 a 1045 c 1099 g 1456 t
ORIGIN
1 ggggtttcgg actactattc tcagttgatc tacaagcaga ataatttaag taatcctcca
61 acaccccctg cctctcttcc tcctacacca cctcctatgg cttgtcagaa gatggccaat
121 ggttttgcaa caactgaaga acttgctgga aaagccggag tgttagtgag ccatgaagtt
181 accaaaactc taggacctaa accatttcag ctgcccttca gaccccagga cgacttgttg
241 gcccgagctc ttgctcaggg ccccaagaca gttgatgtgc cagcctccct cccaacacca
301 cctcataaca atcaggaaga attaaggata caggatcact gtggtgatcg agatactcct
361 gacagttttg ttccctcatc ctctcctgag agtgtggttg gggtagaagt gagcaggtat
421 ccagatctgt cattggtcaa ggaggagcct ccagaaccgg tgccgtcccc catcattcca
481 attcttccta gcactgctgg gaaaagttca gaatcaagaa ggaatgacat caaaactgag
541 ccaggcactt tatattttgc gtcacctttt ggtccttccc caaatggtcc cagatcaggt
601 cttatatctg tagcaattac tctgcatcct acagctgctg agaacattag cagtgttgtg
661 gctgcatttt ccgaccttct tcacgtccga atccctaaca gctatgaggt tagcagtgct
721 ccagatgtcc catccatggg tttggtcagt agccacagaa tcaacccggg tttggagtat
781 cgacagcatt tacttctccg tgggcctccg ccaggatctg caaaccctcc cagattagtg
841 agctcttacc ggctgaagca gcctaatgta ccatttcctc caacaagcaa tggtctttct
901 ggatataagg attctagtca tggtattgca gaaagcgcag cactcagacc acagtggtgt
961 tgtcattgta aagtggttat tcttggaagt ggtgtgcgga aatctttcaa agatctgacc
1021 cttttgaaca aggattcccg agaaagcacc aagagggtag agaaggacat tgtcttctgt
1081 agtaataact gctttattct ttattcatca actgcacaag cgaaaaactc agaaaacaag
1141 gaatccattc cttcattgcc acaatcacct atgagagaaa cgccttccaa agcatttcat
1201 cagtacagca acaacatctc cactttggat gtgcactgtc tcccccagct cccagagaaa
1261 gcttctcccc ctgcctcacc acccatcgcc ttccctcctg cttttgaagc agcccaagtc
1321 gaggccaagc cagatgagct gaaggtgaca gtcaagctga agcctcggct aagagctgtc
1381 catggtgggt ttgaagattg caggccgctc aataaaaaat ggagaggaat gaaatggaag
1441 aagtggagca ttcatattgt aatccctaag gggacattta aaccaccttg tgaggatgaa
1501 atagatgaat ttctaaagaa attgggcact tcccttaaac ctgatcctgt gcccaaagac
1561 tatcggaaat gttgcttttg tcatgaagaa ggtgatggat tgacagatgg accagcaagg
1621 ctactcaacc ttgacttgga tctgtgggtc cacttgaact gcgctctgtg gtccacggag
1681 gtctatgaga ctcaggctgg tgccttaata aatgtggagc tagctctgag gagaggccta
1741 caaatgaaat gtgtcttctg tcacaagacg ggtgccacta gtggatgcca cagatttcga
1801 tgcaccaaca tttatcactt cacttgcgcc attaaagcac aatgcatgtt ttttaaggac
1861 aaaactatgc tttgccccat gcacaaacca aagggaattc atgagcaaga attaagttac
1921 tttgcagtct tcaggagggt ctatgttcag cgtgatgagg tgcgacagat tgctagcatc
1981 gtgcaacgag gagaacggga ccataccttt cgcgtgggta gcctcatctt ccacacaatt
2041 ggtcagctgc ttccacagca gatgcaagca ttccattctc ctaaagcact cttccctgtg
2101 ggctatgaag ccagccggct gtactggagc actcgctatg ccaataggcg ctgccgctac
2161 ctgtgctcca ttgaggagaa ggatgggcgc ccagtgtttg tcatcaggat tgtggaacaa
2221 ggccatgaag acctggttct aagtgacatc tcacctaaag gtgtctggga taagattttg
2281 gagcctgtgg catgtgtgag aaaaaagtct gaaatgctcc agcttttccc agcgtattta
2341 aaaggagagg atctgtttgg cctgaccgtc tctgcagtgg cacgcatagc ggaatcactt
2401 cctggggttg aggcatgtga aaattatacc ttccgatacg gccgaaatcc tctcatggaa
2461 cttcctcttg ccgttaaccc cacaggttgt gcccgttctg aacctaaaat gagtgcccat
2521 gtcaagaggt ttgtgttaag gcctcacacc ttaaacagca ccagcacctc aaagtcattt
2581 cagagcacag tcactggaga actgaacgca ccttatagta aacagtttgt tcactccaag
2641 tcatcgcagt accggaagat gaaaactgaa tggaaatcca atgtgtatct ggcacggtct
2701 cggattcagg ggctgggcct gtatgctgct cgagacattg agaaacacac catggtcatt
2761 gagtacatcg ggactatcat tcgaaacgaa gtagccaaca ggaaagagaa gctttatgag
2821 tctcagaacc gtggtgtgta catgttccgc atggataacg accatgtgat tgacgcgacg
2881 ctcacaggag ggcccgcaag gtatatcaac cattcgtgtg cacctaattg tgtggctgaa
2941 gtggtgactt ttgagagagg acacaaaatt atcatcagct ccagtcggag aatccagaaa
3001 ggagaagagc tctgctatga ctataagttt gactttgaag atgaccagca caagattccg
3061 tgtcactgtg gagctgtgaa ctgccggaag tggatgaact gaaatgcatt ccttgctagc
3121 tcagcgggcg gcttgtccct aggaagaggc gattcaacac accattggaa ttttgcagac
3181 agaaagagat ttttgttttc tgttttatga ctttttgaaa aagcttctgg gagttctgat
3241 ttcctcagtc ctttaggtta aagcagcgcc aggaggaagc tgacagaagc agcgttcctg
3301 aagtggccga ggttaaacgg aatcacagaa tggtccagca cttttgcttt tttttctttt
3361 ccttttcttt tttttttgtt tgttttttgt tttgtttttc ccttgtgggt gggtttcatt
3421 gttttggttt tctagtctca ctaaggagaa acttttactg gggcaaagag ccgatgactg
3481 ccctgccccg ggcaggggcc ttcctatgaa tgtaagactg aaatcaccag cgagggggac
3541 agagagtgct ggccacggcc ttattaaaaa ggggcaggcc ctctaacttc aaaatgtttt
3601 taaataaagt agacaccact gaacaaggaa tgtactgaaa tgacttcctt agggatagag
3661 ctaagggata ataacttgca ctaaatacat ttaaatactt gattccatga gtcagtttat
3721 tgtagttttt gatttctgta aaataagaga aacttttgta tttattattg aataagtgaa
3781 tgaagctatt tttaaataaa gttagaagaa agccaagctg ctgctgttac ctgcagaact
3841 aacaaaccct gttactttgt acagatatgt aaatattttg agaaaaaata cagtataaaa
3901 atagttattg accaaatgct accaggctct gcagcagctc gggggcttat aaaatgttca
3961 tagggatgtt acaatataat tttgtgttat aaaatatgcc attataatta tgtaataacc
4021 aaaatttcaa cctagagtgt tgggggtttt ttggaaaccg cagtctatta gtactcaatg
4081 gttttataca ccttacttct gacagagcgg ggcgtatgct acgactacaa cttttatagc
4141 tgttttggta atttaaacta attttttcat attatattgt tgcatcccta cttcttcagt
4201 caggtttttt tgtgcttaca atttgtgata actgtgaata actgcttaaa aatacaccca
4261 aatggaggct gaattttttc ttcagcaaaa gtagttttga ttagaacttt gtttcagcca
4321 cagagaatca tgtaaacgta ataggatcat gtagcagaaa cttaaatcta accctttagc
4381 cttctattta acacaaaaat ttgaaaaagt taaaaaaaaa aaggagatgt gattatgctt
4441 acagctgcag gactctggca atagggtttt tggaagatgt aattttaaaa tgtgtttgta
4501 tgaactgttt gtttacattt ctttaataaa aaaaacactg ttttgtgttt gcttgtagaa
4561 acttaatcag cattttgaac caggttagct ttttattttg tacttaaaat tctggtactg
4621 acacttcaca ggctaagtat aaaatgaagt tttgtgtgca caattcaagt ggactgtaaa
4681 ctgttggtat attcagtgat gcagttctga acttgtatat ggcatgatgt atttttatct
4741 tacagaataa atcaattgta tatatttttc tcttgataaa tagctgtatg aaatttgttt
4801 cctgaatatt tttcttctct tgtacaatat cctgacatcc taccagtatt tgtcctaccg
4861 ggtttttgtt gttttctgtt ctgtataata gtatctaatg ttggcaaaaa ttgaattttt
4921 tgaagtatac agagtgttat gggttttgga atttgtggac acagatttag aagatcacca
4981 tttacaaata aaatatttta catctaaaaa aaaaaaaaaa aaaaa
//