LOCUS AL833887 2088 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp564M1162 (from clone DKFZp564M1162).
ACCESSION AL833887
VERSION AL833887.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2088)
AUTHORS Blum H., Bauersachs S., Mewes H.W., Weil B., Amid C., Osanger A.,
Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by LMU (Ludwig Maximilians University, Munich/Germany)
within
the cDNA sequencing consortium of the German Genome Project.
This clone (DKFZp564M1162) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp564M1162
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..2088
/db_xref="H-InvDB:HIT000028760"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="fetal"
/clone_lib="564 (synonym: hfbr2). Vector pAMP1; host
Xl-2blue; sites NotI + SalI"
/clone="DKFZp564M1162"
/tissue_type="brain"
/note="potassium channel tetramerisation domain containing
3, N-terminus truncated"
/db_xref="taxon:9606"
CDS join(<5..913,912..947)
/codon_start=1
/gene="DKFZp564M1162"
/product="hypothetical protein"
/db_xref="GOA:Q9Y597"
/db_xref="H-InvDB:HIT000028760.17"
/db_xref="HGNC:HGNC:21305"
/db_xref="InterPro:IPR000210"
/db_xref="InterPro:IPR001680"
/db_xref="InterPro:IPR003131"
/db_xref="InterPro:IPR011333"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR019775"
/db_xref="InterPro:IPR036322"
/db_xref="UniProtKB/Swiss-Prot:Q9Y597"
/protein_id="CAD38743.2"
/translation="QIVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSS
RMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLST
SRCATPNISPATSVVQHSHLRESNSSLQLQHHDTTHEAATYGSMRPYRESPLLARARR
TESFHSYRDFQTINLNRNVERAVPENGNLGPIQAEVKGATGECNISERKSPGVEIKSL
RELDSGLEVHKIAEGFSESKKRPSEDENENKIEFRKKGGFEGGGFLGRKKVPYLASSP
STSDGGTDSPGTASPSPTKTTPSPRHKKKSDSSGQEYS"
BASE COUNT 705 a 343 c 409 g 631 t
ORIGIN
1 gggccagata gttgttccca tcaccaacaa actatttgta agactctcat cgactggaaa
61 aagaatatgt gagatccagg ctgttgactg tactacaata tcctcattta cagtgaggga
121 atgtgaggga tccagtagga tgggctcaag accaaggcgc tacttgttca caggccatac
181 aaatggcagt attcaaatgt gggatctgac cactgctatg gatatggtta acaaaagtga
241 agataaggat gtaggtggtc caaccgaaga agagctactc aaattactcg atcaatgtga
301 tttgagcaca tctcgctgtg ctactcctaa catcagtcca gcaacttccg tagttcagca
361 tagccactta cgagaatcaa attctagcct tcagcttcag caccatgata ccacccatga
421 agcggctact tacggttcca tgaggcctta cagagaaagt cctttattag caagggcaag
481 aaggactgag agctttcaca gttataggga cttccagact attaatttga acagaaatgt
541 agaaagagct gtccctgaaa atggtaactt gggtccaata caagctgaag tgaaaggggc
601 aacaggggaa tgtaatatat ctgagagaaa gtctcctgga gtagaaataa aaagtttgag
661 agaattggat agtggattgg aagtgcataa aatagctgaa ggtttttcag aatccaagaa
721 aaggccatca gaagatgaaa atgaaaataa aatagagttt aggaagaaag gaggatttga
781 agggggagga ttccttggaa gaaagaaagt tccctatctg gcatcatcac caagtacttc
841 cgatggagga actgactcac ctggtactgc gtccccatct cctacaaaga ctactccatc
901 tcctcggcat aaaaaaaagt gattcttcag gtcaggagta cagctagtga aaactcacca
961 aaatgaatag ttgtttcgtt acatttagat gaaagttaaa ctttactgaa tttcagtaca
1021 ttagttttta cactaaaact ttacaagata aaattggact tcatttagta tctttttaac
1081 agaattactt ggaataatga gatacaataa tcatatctct tttgacattt tggaaatttt
1141 tttaatttta caagtacatt taacagatca tttataaagc aggagtccat tttaacactt
1201 accgactttt tttggtttgg aaacatatta ccacgtctta ataggatggt gcccatatag
1261 gtgagcatcc ctttagatca tgggaaccag cagactgcat tcctaatctt cattatgcct
1321 gagacttgtc ttacaatgtt acctttaagt gaatcacata attgtctttg gaacttggtc
1381 tcccaacact tattgtgatt gcaaagtgtt taccagatat ttgatgaggt gctatgtttg
1441 tgaaaaacat atcatgtaat tcaaaaacac tattgatatt gaataccaga taccactatg
1501 tagtaagtct tttaggatga ttttaattta gtcgtgcgtc attttctgat tctcatcatt
1561 gagagatctt aaatcttagc aagcattagc aatattaaat gccaaaattc cattgaaact
1621 ttcaagttgg agcaattgtc tgtgtttgaa aagatgaaat aaaaataata atcaagggca
1681 aagctttgag tgcccagaag ggaaagctgt accagttgct aacctgtctt gtttcaggag
1741 ccaccatgtt tttttttcag tgttaacaac aatcatgata attaaattaa aacactagtt
1801 tgttcacttg taggactgca gttctgaatt ttgggttaaa ggttttggct gctgtaagaa
1861 tgtgaatttg aatgtatttt gaattgtaag agcaaaagaa cgtttttgta caattttttt
1921 tcatttaatt ggaatgatct tcaggtttct acaaataggg taattgtaaa tttaaagcat
1981 tagcatttat tggtggataa tgtatatatc cccattccaa gaaatataag tgagtgaagt
2041 tgaaataaaa tctttaaaat ttactataaa aaaaaaaaaa aaaaaaac
//