LOCUS AL833880 4139 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434P1417 (from clone DKFZp434P1417).
ACCESSION AL833880
VERSION AL833880.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4139)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp434P1417) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434P1417
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..4139
/db_xref="H-InvDB:HIT000028753"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434P1417"
/tissue_type="testis"
/note="TIP120 protein, N-terminus truncated,
differentially spliced"
/db_xref="taxon:9606"
CDS <1..2313
/codon_start=1
/gene="DKFZp434P1417"
/product="hypothetical protein"
/db_xref="GOA:Q86VP6"
/db_xref="H-InvDB:HIT000028753.16"
/db_xref="HGNC:HGNC:30688"
/db_xref="InterPro:IPR011989"
/db_xref="InterPro:IPR013932"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR039852"
/db_xref="PDB:1U6G"
/db_xref="PDB:4A0C"
/db_xref="UniProtKB/Swiss-Prot:Q86VP6"
/protein_id="CAD38737.1"
/translation="HVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSD
DEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADV
FHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQ
CCFNMLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILI
KNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILN
ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQ
SYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLS
GQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLL
HSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLP
RLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVA
LVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKA
AFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRL
DRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQS
QISSNPELAAIFESIQKDSSSTNLESMDTS"
BASE COUNT 1301 a 691 c 799 g 1348 t
ORIGIN
1 catgtttcta ccattataaa tatttgtctt aaatatctta cctatgatcc aaattataat
61 tacgatgatg aagatgaaga tgaaaatgca atggatgctg atggtggtga tgatgatgat
121 caagggagtg atgatgaata cagtgatgat gatgacatga gttggaaagt gagacgtgca
181 gctgcgaagt gcttggatgc tgtagttagc acaaggcatg aaatgcttcc agaattctac
241 aagaccgtct ctcctgcact aatatccaga tttaaagagc gtgaagagaa tgtaaaggca
301 gatgtttttc acgcatacct ttctcttttg aagcaaactc gtcctgtaca aagttggcta
361 tgtgaccctg atgcaatgga gcagggagaa acacctttaa caatgcttca gagtcaggtt
421 cccaacattg ttaaagctct tcacaaacag atgaaagaaa aaagtgtgaa gacccgacag
481 tgttgtttta acatgttaac tacagtaaag gcattgacac tgattgctgg gtcacctttg
541 aagatagatt tgaggcctgt tctgggagaa ggggttccta tccttgcttc atttcttaga
601 aaaaaccaga gagctttgaa actgggtact ctttctgccc ttgatattct aataaaaaac
661 tatagtgaca gcttgacagc tgccatgatt gatgcagttc tagatgagct cccacctctt
721 atcagcgaaa gtgatatgca tgtttcacaa atggccatca gttttcttac cactttggca
781 aaagtatatc cctcctccct ttcaaagata agtggatcca ttctcaatga acttattgga
841 cttgtgagat cacccttatt gcagggggga gctcttagtg ccatgctaga ctttttccaa
901 gctctggttg tcactggaac aaataattta ggatacatgg atttgttgcg catgctgact
961 ggtccagttt actctcagag cacagctctt actcataagc agtcttatta ttccattgcc
1021 aaatgtgtag ctgcccttac tcgagcatgc cctaaagagg gaccagctgt agtaggtcag
1081 tttattcaag atgtcaagaa ctcaaggtct acagattcca ttcgtctctt agctctactt
1141 tctcttggag aagttgggca tcatattgac ttaagtggac agttggaact aaaatctgta
1201 atactagaag ctttctcatc tcctagtgaa gaagtcaaat cagctgcatc ctatgcatta
1261 ggcagcatta gtgtgggcaa ccttcctgaa tatctgccgt ttgtcctgca agaaataact
1321 agtcaaccca aaaggcagta tcttttactt cattccttga aggaaattat tagctctgca
1381 tcagtggtgg gccttaaacc atatgttgaa aacatctggg ccttattact aaagcactgt
1441 gagtgtgcag aggaaggaac cagaaatgtt gttgctgaat gtctaggaaa actcactcta
1501 attgatccag aaactctcct tccacggctt aaggggtact tgatatcagg ctcatcatat
1561 gcccgaagct cagtggttac ggctgtgaaa tttacaattt ctgaccatcc acaacctatt
1621 gatccactgt taaagaactg cataggtgat ttcctaaaaa ctttggaaga cccagatttg
1681 aatgtgagaa gagtagcctt ggtcacattt aattcagcag cacataacaa gccatcatta
1741 ataagggatc tattggatac tgttcttcca catctttaca atgaaacaaa agttagaaag
1801 gagcttataa gagaggtaga aatgggtcca tttaaacata cggttgatga tggtctggat
1861 attagaaagg cagcatttga gtgtatgtac acacttctag acagttgtct tgatagactt
1921 gatatctttg aatttctaaa tcatgttgaa gatggtttga aggaccatta tgatattaag
1981 atgctgacat ttttaatgtt ggtgagactg tctacccttt gtccaagtgc agtactgcag
2041 aggttggacc gacttgttga gccattacgt gcaacatgta caactaaggt aaaggcaaac
2101 tcagtaaagc aggagtttga aaaacaagat gaattaaagc gatctgccat gagagcagta
2161 gcagcactgc taaccattcc agaagcagag aagagtccac tgatgagtga attccagtca
2221 cagatcagtt ctaaccctga gctggcggct atctttgaaa gtatccagaa agattcatca
2281 tctactaact tggaatcaat ggacactagt tagatgtttg ttcaccatgg ggaccattac
2341 atatgaccat acaatgcact gaattgacag gttaatcata agacatggaa agagaagtgt
2401 ctaaaagctt caaaatgttc cacttttttt tccttcatgg agactgtttg tttggctttc
2461 ttccattgtt gtttttgtag catttatttc agaaatgtgt atttccataa tccagaggtt
2521 gtaaaaccac tagtgtttta gtggttacag caacatttga aatggaaact aaaagttagg
2581 attttatgga gtatggagat agggtccagt atctatttac cctgtaatgt ttaggattaa
2641 aatgttaaaa ttttgtgacc atgaatttct ttcttttata aattttctca tttaaaaatc
2701 aaaaatcttg caaaacaaaa accatgtttc tttttcttgt ataacttttt gttttcagca
2761 acataaattg atttttagct ggcagacaag aatatccata taagatttgt taaccatttc
2821 agagagtttg gcaattttta aaagataata aggtatcatt tttaagtatg aaaattaaca
2881 atatccctgt tgcgcacatt aattttgcat gagtaagttt acaaatatgt atcgtctgta
2941 aagcagcatg tgcagattat tcataatata gaagttaaaa taagtattag tgcaattttc
3001 agatatttat ttttgcacag aaaacacatt atctggagag aaagaaagga gaatttttga
3061 gacttgggtt ttcttaatgc cagtgtgaat ttgcagatgt tttcagaaaa tcaagtcaca
3121 gtaacaattt gccacttttt tctattataa atcttcttac ttaaattttg aatatttagt
3181 ttttctcagt tacccatttg tgtgtgtgtg attccactta gaaattctta aaaccagatt
3241 tttctttcat tccgtttgga tgtctacatt ccttatcaaa ggatataaat actgtgtatg
3301 cttttgaatt ttatttttag gaaaattctg aagccagcta tcacaggttt gttagctaat
3361 aatagtattt tcttttagtt gagttaggtt tttccccatc tcctgtagag cgaatttaca
3421 tattgtattg ggtaagtgtt cactactttt cctgattaag ggatctgtgc tggggaacaa
3481 agcttttgca gtaccttata ttgtagttaa aattttattt aacatatcct tcagtgagct
3541 catttcacac tgtagcctct tccttaaaat ttgtggtgct cctgtaacag taagaactaa
3601 ttctgaaata aaagacatct cctaatgctg tgcaaacata gtttacatgt attgaaggag
3661 gcagttgtta aattgagtga ccaatttaag caatcagata tttgaaaact gcacccttta
3721 gttttgaaac tgtgaattag aaacactttt cctgctgtat tactacctgc tttaacatcc
3781 aaatatacag tgattttaaa tgataacata ctgtggttat tagattaaca gcttgatttt
3841 gaatgttcag atgataatgc agaagacatc acttctagta aggattttga ctagtgcatt
3901 gatgttgaag ttggtgccat ttcaaaatgt ggcaggtgat aatcttttac cataatttgc
3961 ataaaactgt aatagaagtt tattttgaga tgttagtata ttatgtacta tgcatttctg
4021 tggtatagat gttgtggata tatttaagta tttggttaca tggttttaca ataaattaca
4081 atactgcagg caaaaaaaaa aaaaaaaaaa aaaaaaaaga aaaaaaaaaa aaaaaaaag
//