LOCUS AL833836 3311 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp434L086 (from clone DKFZp434L086).
ACCESSION AL833836
VERSION AL833836.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3311)
AUTHORS Koehrer K., Beyer A., Mewes H.W., Gassenhuber J., Wiemann S.
JOURNAL Submitted (10-JUL-2002) to the INSDC. GSF, Institut fuer
Bioinformatik MIPS, Ingolstaedter Landstr. 1, 85764 Neuherberg,
Germany
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by BMFZ (Biomedical Research Center at the Charite,
Berlin/Germany) within the cDNA sequencing consortium of the
German Genome Project.
This clone (DKFZp434L086) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..3311
/db_xref="H-InvDB:HIT000028709"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="434 (synonym: htes3). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp434L086"
/tissue_type="testis"
/db_xref="taxon:9606"
CDS <1..2993
/codon_start=3
/gene="DKFZp434L086"
/product="hypothetical protein"
/note="similarity to golgin-245"
/db_xref="GOA:Q8NDM7"
/db_xref="H-InvDB:HIT000028709.14"
/db_xref="HGNC:HGNC:26684"
/db_xref="InterPro:IPR015943"
/db_xref="InterPro:IPR036322"
/db_xref="InterPro:IPR039692"
/db_xref="UniProtKB/Swiss-Prot:Q8NDM7"
/protein_id="CAD38696.1"
/translation="PGLLYLSSHGLWLITIAKCGILCIRDVYTLETFAWCRSHSHQGH
GIQSMRISMDGQNILVNGRDDGTLVYLKWKRFGGHLASEILDYYQKLLISLSSAMDKE
NHYLSTTPKVSVDLGSDSEHTKQKASTDLSQDELVLTDVKKEIPWIQQKSQEAIKKEV
NLFSKKRKEIKQGIKSLSKTILNMMEENDKLENIAKLDQQEFGLDLEELERLHDESQE
EVAKMIKDVEMHNLAKSYLAELIKEECWNSMAVKGRALKCFHIPCVVENFPMKARTVE
ELKELERVLQQKKIEAECLKLRKEIVEAQSGVKLIKQRHEEDDEEEEEEDKTVKYSNL
PNYLLGSLSTDFGVDTSLLSSQLELHSREEKINQIILLKDIIYKVKTVFNNEFDAAYK
QKEFEIARVKERNVRIREIILDLELEEAVWQPEFEDCEKPERTLVVQDEEITAHKHIK
PWHKAKELIVNHEKEHWLLIQDASTRLRALMDMMGGVLEVKKEDILRMVIPQPAFMAK
PDAVWTEEERKQFKDYEKKVKELNEERDKYRKSLEAELKKLQNSIQESTQAFDEHLKR
LFERRVKAEMVTNQEELKISNLAFSLLLDEELSSREKFLNNYLTRKQHEKVMDRSFKK
EFSEIPGHQVDILYKLFKRRPRISKQKTHSETTSVVPFGELPGSGKLNKDAFAQLMKA
MDELDNISNMPEGLDPLVWNHFCMTRRAKVENEQKVKQKAADLLEMATFLQKRVEEEE
KVQQEIERVFHELILLQEEKVRFQLNLTIQILLKQGQVELENFQLVLEYSDAILINKN
IIEDLNSVIRTQGQKKVASMMESKDVHKRILQIEWEHKKMEMEREDLNQKAWDIQMLF
FSRDRQKYLNEPNYEALISIQIGIMEQTIAVLDKMHKKNVENCKKLLKKLGKFSNQKD
IANYALSCNLREELVAVSERKDICNAMGSKLTCEKIVKERYENMMQQQKLTNISKQQA
EQISILQTEVERLRMKTFPALVQM"
regulatory 3175..3180
/regulatory_class="polyA_signal_sequence"
polyA_site 3193
BASE COUNT 1302 a 498 c 712 g 799 t
ORIGIN
1 gacctggact gctctatctg tcttcacatg gattgtggct cataacaata gctaaatgtg
61 gaattctgtg tatccgagac gtttatactt tggaaacatt tgcttggtgt cggagtcatt
121 ctcaccaggg tcatgggatt cagtcaatga gaatttcaat ggatggacaa aacattctgg
181 tgaatgggag agatgatggc acccttgtct acctaaagtg gaagcgattt ggaggacacc
241 tagccagtga aattctggac tattaccaga aactattaat ttccctgagc agcgccatgg
301 acaaggagaa tcattattta agcacaacac caaaagtttc cgtagatttg ggatccgatt
361 ctgaacacac aaaacagaag gcaagcactg acttatcaca agatgaatta gttctaaccg
421 atgttaagaa ggaaattcct tggatacaac aaaaaagcca agaggccatc aaaaaggagg
481 ttaatctgtt ttccaagaaa aggaaagaga taaaacaagg aatcaaatca ctttccaaaa
541 ctattctgaa tatgatggaa gaaaatgaca aactagaaaa tattgcaaaa ttagaccaac
601 aggaatttgg tctggatctt gaggaactag aaaggcttca tgatgaaagt caggaagaag
661 tggcaaagat gataaaggat gtagagatgc ataacttagc caagagctat ttggctgaac
721 ttatcaaaga agaatgttgg aattcgatgg ctgtgaaagg tcgagctctt aagtgttttc
781 atatcccctg tgtggttgaa aacttcccga tgaaagcgcg cacggttgaa gagctgaaag
841 aattggaaag agttttacag caaaagaaga ttgaagcaga gtgtcttaaa ctacggaagg
901 aaattgtaga ggctcagtct ggagttaagt tgattaaaca gcgtcatgaa gaggatgatg
961 aagaagagga agaggaagac aagacagtaa aatatagcaa tttgcccaat tacctgcttg
1021 gtagtctgag tactgatttt ggggtagata cctctttatt gtcaagccaa ttggagcttc
1081 attccagaga agagaaaatc aaccaaatta tattattgaa agatatcatt tacaaggtaa
1141 aaactgtttt caataatgag tttgacgctg catataaaca aaaagagttt gaaattgcac
1201 gcgtgaagga aagaaatgtt cgaattcgag aaattatttt agatctggaa ttggaagaag
1261 cagtctggca accagaattt gaagactgtg agaagccaga gagaacgctt gttgtgcaag
1321 atgaggagat tacagcccac aaacacatta agccgtggca caaagccaaa gaattgatcg
1381 tgaatcatga aaaggagcac tggcttctga tacaggatgc cagtacaaga ctccgagctc
1441 tgatggacat gatgggagga gttctggaag tcaagaagga agatattttg agaatggtga
1501 ttcctcaacc tgctttcatg gcaaaacctg atgctgtgtg gactgaagaa gaaagaaaac
1561 aattcaaaga ttatgagaaa aaagtaaagg agttaaatga agaaagagat aagtatagaa
1621 agtcattaga agcagaactg aagaaacttc aaaactctat tcaagaaagc acacaggcct
1681 ttgatgaaca tttgaaaaga ctttttgaaa ggagagtgaa ggcagagatg gttaccaacc
1741 aggaggaact gaaaataagt aaccttgcat tttctttatt gttggatgaa gaattaagct
1801 ctagagaaaa attcctgaac aactacctta caaggaaaca gcacgagaaa gttatggatc
1861 gcagctttaa aaaggaattt tctgaaattc ctggtcatca agtggatata ctctacaaac
1921 tttttaaacg ccgaccaagg atttccaaac agaaaacgca ctcagaaaca accagcgttg
1981 tccctttcgg agaactacca ggatctggca agttgaataa ggatgccttt gcccagttaa
2041 tgaaagctat ggatgagttg gacaatatta gtaacatgcc agaaggcttg gaccctttgg
2101 tctggaatca tttctgcatg acaagacgag caaaagtgga aaatgaacag aaagtaaagc
2161 agaaagcagc tgacttattg gaaatggcaa ctttcctcca gaagagagtt gaggaggaag
2221 agaaggtgca acaggagatt gagagagtgt tccatgaact catcctatta caggaagaga
2281 aagtgagatt ccagttgaat ttgacaatcc aaattcttct taaacaagga caagtagaac
2341 tggaaaattt ccagctagta ctggagtatt ctgatgcaat tctcatcaac aagaacataa
2401 ttgaagactt gaattctgtg attcggactc aaggacaaaa gaaagttgct agcatgatgg
2461 aaagtaaaga tgtacacaaa agaatacttc agattgagtg ggaacataag aaaatggaga
2521 tggaaaggga agatctaaat cagaaggctt gggatattca gatgctattt ttttcaagag
2581 atcgtcaaaa gtacctaaat gaaccaaact atgaggctct gattagtatt cagattggaa
2641 taatggaaca aaccattgct gttttagata agatgcacaa aaagaatgtg gaaaactgca
2701 agaaactact caaaaaactt ggaaagttca gcaatcaaaa agatatagca aattatgccc
2761 taagctgcaa tctacgagaa gagttggtag ctgtctcaga gagaaaagac atctgtaatg
2821 caatggggtc taaactgact tgtgaaaaga ttgtcaaaga acggtatgaa aacatgatgc
2881 aacagcagaa gttaacaaat atttcaaaac aacaagctga acagatttca atactacaga
2941 ctgaagttga aagattaaga atgaaaacat ttcctgctct tgttcaaatg taaaaacgct
3001 ggcaggaaaa cacaaggcca aatcaatcat ttaaaaaatc atttcatttg ggtaaaatga
3061 tttccttttc tttcttactg ggaaattgaa gtagcatgtc ctctgagttg catgttttag
3121 ataaaaaatt gtttaatttt agccttaatt gtatacaaat ttttgtcctg catgaataaa
3181 tgtgtaaaat accatgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaacaaaa
3241 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3301 aaaaaaaaaa a
//