LOCUS AL833830 6377 bp mRNA linear HTC 16-APR-2005 DEFINITION Homo sapiens mRNA; cDNA DKFZp434B1614 (from clone DKFZp434B1614). ACCESSION AL833830 VERSION AL833830.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6377) AUTHORS Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S. CONSRTM The German cDNA Consortium JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de; sequenced by BMFZ (Biomedical Research Center at the Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA sequencing consortium of the German Genome Project. This clone (DKFZp434B1614) is available at the RZPD Deutsches Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany. Please contact RZPD for ordering: http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp434B1614 Further information about the clone and the sequencing project is available at http://mips.gsf.de/projects/cdna/ FEATURES Location/Qualifiers source 1..6377 /db_xref="H-InvDB:HIT000028703" /organism="Homo sapiens" /mol_type="mRNA" /dev_stage="adult" /clone_lib="434 (synonym: htes3). Vector pSport1; host DH10B; sites NotI + SalI" /clone="DKFZp434B1614" /tissue_type="testis" /note="protocadherin 20, N-terminus elongation" /db_xref="taxon:9606" CDS 2107..4962 /codon_start=1 /gene="DKFZp434B1614" /product="hypothetical protein" /db_xref="GOA:Q8N6Y1" /db_xref="H-InvDB:HIT000028703.18" /db_xref="HGNC:HGNC:14257" /db_xref="InterPro:IPR002126" /db_xref="InterPro:IPR015919" /db_xref="InterPro:IPR020894" /db_xref="UniProtKB/Swiss-Prot:Q8N6Y1" /protein_id="CAD38690.1" /translation="MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLP HLFLFFLFVGPFSCLGSYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQ SQLPERTGAEWNPPLSFSLASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGT AWSGSVSISSSPSDSCLLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWV PENAPVNTRLAIEHPAVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMG ALDRETQDQYVSIIIAEDGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNAT VGTPIAAVQAVDKDLGTNAQITYSYSQKVPQASKDLFHLDENTGVIKLFSKIGGSVLE SHKLTILANGPGCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTP IAFFTIRDPEGKYKVNCYLDGEGPFRLSPYKPYNNEYLLETTKPMDYELQQFYEVAVV AWNSEGFHVKRVIKVQLLDDNDNAPIFLQPLIELTIEENNSPNAFLTKLYATDADSEE RGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDREEKEKYRYTVRAVDCGKPPRESVAT VALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGRNGWVALSVVNQS DIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEPALSSTAKITILLLDINDNPP LVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRID PKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESL LRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGSITLVTGMGIYICLR KGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI" BASE COUNT 2004 a 1239 c 1294 g 1840 t ORIGIN 1 ataaaatatt gcatattgac agcaatatcc cagtggctga tttattgata atatctttga 61 ccatttgaat tttttttcct attatatata aggaaataca aactaggtaa caggaagaaa 121 tgagaaaagg tagagagaga caatagtgaa gactggtgga cattggacta caaaagatta 181 ctgcaggatt cttctatgat gctgattaca gctttatctt atcaagcttt ggcattgaag 241 accatgtgaa ttcatctcca accctgggag tgaaataaga actttctttt ttgcttctga 301 aattttaagc tctatacgga aacacttttt acttaatctg catgacatca gagaaaggga 361 acaatttgac caaagaaaga agaaaaagtg gattagcaga tctcatggac tgagagtctc 421 cagatggtag gaggtccatt cagcagaaat acaaatgaga atacgatgtt tctaatgtat 481 ttaatttgga gaaaaacatt ttcacatttt ttcaataagc aaagttaatc acattacatt 541 ttacctttgg taaaagaata ttaattaaat tgattatgct cacactagag aacaatataa 601 catatcatag tcaaataacg tttatgttta tattcattat tacaagcatt aaaaagaaat 661 aaatagtgtt ggcagatatt acttaagcag gcagagtctc ctatatctgg aaatttatca 721 tttatactgc tagagttaag gatattttaa tagtatttaa ttaactaaaa tttaagagat 781 tactgctttc agccctttaa aaattattaa ttgaacattg actacctgct tggtctgtgt 841 ttaccattat ccattaagag cttgttattt aattggggaa atccaggtca agatacagta 901 aatacacaag aaacttatca aatatttgaa taaaaataat ggcacccata ttttatggtg 961 tatttatagt attgttcctg aaaaaataag aaaaactatt aatatccccc tccaaaaaca 1021 catggaagaa atttcccatt tttaaaaatt attaatattc tcatctaata aatgctattt 1081 ggaactatca tattggaaat aaataaaata cctttaatcc aataatgata tcattgaaga 1141 aatgagtacc ctcatatagt tacagtgcta ttataaataa ctaaaatttc tggaggtatt 1201 tgttttacat ataccagaaa gtcttaaaat tttacattcc agttaaaaca tatattcaat 1261 atttagtaat tcatgctaaa ttatcataaa tatttccaaa gatgtcgata aaataagcct 1321 cactgaaaat atatttatat aaaatattga acaagtaaaa tgttcatatc cacattacaa 1381 actgatatga ggaaattcta ttctgtccaa aaatgataca gaatacgtaa agacatgcaa 1441 aatgattata acataataaa acataaatta gatgattttt aaaatctcta agttcagtaa 1501 aaatccagag aaatcaaact gaatgtggat aaaggcacca aaaagtggaa tgaataaagt 1561 cacgtacatc ggactgtgaa gaaaaatcat gttttggaaa agctgtccac acaatacaag 1621 aatttttaat cgaagaaaaa ttcactggca aagaagccac tactgcctct aaaataagac 1681 cacaaggcaa acacccagag acatttgagc ctccaactag gaaactagca gaagctctac 1741 cactgcccac agcaaagatt caaaattggg caacctgtgg acttggcatc tgactggtgc 1801 ggcaaggaag gaggctggta ggtaagcgct actgtgccca accccgagct gcctcttcgc 1861 agtcttcagg agcaagtccc ccattccagc tcctctggca gagtatggag ttacctgcgt 1921 ccggggcagg aaaccatgaa tgtgcccttc tgccctcttg cctttctgcc actctttgag 1981 ttcccgtcct taattgaaga gccagtgact attggctgaa gttcccccag cgatttgcat 2041 gaaccgagag ggagtgtctt ctgccgccct cccttcaaga gcgctctgac tgcagcctcc 2101 cagggaatgc gcggccgagg gaatgcgcgc agctcacagg ccctgggagt gagctggtgc 2161 ccggcgacct ggcacccgcg cctggatatg gggcgtctac atcgtcccag gagcagcacc 2221 agctacagga acctgccgca tctgtttctg tttttcctct tcgtgggacc cttcagctgc 2281 ctcgggagtt acagccgggc caccgagctt ctgtacagcc taaacgaggg actacccgcg 2341 ggggtgctca tcggcagcct ggccgaggac ctgcggctgc tgcccaggtc tgcagggagg 2401 ccggacccgc agtcgcagct gccagagcgc accggtgctg agtggaaccc ccctctctcc 2461 ttcagcctgg cctcccgggg actgagtggc cagtacgtga ccctagacaa ccgctctggg 2521 gagctgcaca cttcagctca ggagatcgac agggaggccc tgtgtgttga agggggtgga 2581 gggactgcgt ggagcggcag cgtttccatc tcctcctctc cttctgactc ttgtcttttg 2641 ctgctggatg tgcttgtcct gcctcaggaa tacttcaggt ttgtgaaggt gaagatcgcc 2701 atcagagaca tcaatgacaa cgccccgcag ttccctgttt cccagatctc ggtgtgggtc 2761 ccggaaaatg cacctgtaaa cacccgactg gccatagagc atcctgctgt ggacccagat 2821 gtaggcatta atggggtaca gacctatcgc ttactggact accatggtat gttcaccctg 2881 gacgtggagg agaatgagaa tggggagcgc accccctacc taattgtcat gggtgctttg 2941 gacagggaaa cccaggacca gtatgtgagc atcatcatag ctgaggatgg tgggtctcca 3001 ccacttttgg gcagtgccac tctcaccatt ggcatcagtg acattaatga caattgccct 3061 ctcttcacag actcacaaat caatgtcact gtgtatggga atgctacagt gggcacccca 3121 attgcagctg tccaggctgt ggataaagac ttggggacca atgctcaaat tacttattct 3181 tacagtcaga aagttccaca agcatctaag gatttatttc acctggatga aaacactgga 3241 gtcattaaac ttttcagtaa gattggagga agtgttctgg agtcccacaa gctcaccatc 3301 cttgctaatg gaccaggctg catccctgct gtaatcactg ctcttgtgtc cattattaaa 3361 gttattttca gaccccctga aattgtccct cgttacatag caaacgagat agatggtgtt 3421 gtttatctga aagaactgga acccgttaac actcccattg cgtttttcac cataagagat 3481 ccagaaggta aatacaaggt taactgctac ctggatggtg aagggccgtt taggttatca 3541 ccttacaaac catacaataa tgaatattta ctagagacca caaaacctat ggactatgag 3601 ctacagcagt tctatgaagt agctgtggtg gcttggaact ctgagggatt tcatgtcaaa 3661 agggtcatta aagtgcaact tttagatgac aatgataatg ctccaatttt ccttcaaccc 3721 ttaatagaac taaccatcga agagaacaac tcacccaatg cctttttgac taagctgtat 3781 gctacagatg ccgacagcga ggagagaggc caagtttcat attttctggg acctgatgct 3841 ccatcatatt tttccttaga cagtgtcaca ggaattctga cagtttctac tcagctggac 3901 cgagaagaga aagaaaagta cagatacact gtcagagctg ttgactgtgg gaagccaccc 3961 agagaatcag tagccactgt ggccctcaca gtgttggata aaaatgacaa cagtcctcgg 4021 tttatcaaca aggacttcag cttttttgtg cctgaaaact ttccaggcta tggtgagatt 4081 ggagtaatta gtgtaacaga tgctgacgct ggacgaaatg gatgggtcgc cctctctgtg 4141 gtgaaccaga gtgatatttt tgtcatagat acaggaaagg gtatgctgag ggctaaagtc 4201 tctttggaca gagagcagca aagctcctat actttgtggg ttgaagctgt tgatgggggt 4261 gagcctgccc tctcctctac agcaaaaatc acaattctcc ttctagatat caatgacaac 4321 cctcctcttg ttttgtttcc tcagtctaat atgtcttatc tgttagtact gccttctact 4381 ctgccaggct ccccggttac agaagtctat gctgtcgaca aagacacagg catgaatgct 4441 gtcatagctt acagcatcat agggagaaga ggtcctaggc ctgagtcctt caggattgac 4501 cctaaaactg gcaacattac tttggaagag gcattgctgc agacagatta tgggctccat 4561 cgcttactgg tgaaagtgag tgatcatggt tatcccgagc ctctccactc cacagtcatg 4621 gtgaacctat ttgtcaatga cactgtcagt aatgagagtt acattgagag tcttttaaga 4681 aaagaaccag agattaatat agaggagaaa gaaccacaaa tctcaataga accgactcat 4741 aggaaggtag aatctgtgtc ttgtatgccc accttagtag ctctgtctgt aataagcttg 4801 ggttccatca cactggtcac agggatgggc atatacatct gtttaaggaa aggggaaaag 4861 catcccaggg aagatgaaaa tttggaagta cagattccac tgaaaggaaa aattgacttg 4921 catatgcgag agagaaagcc aatggatatt tctaatattt gatatttcat ggtggaataa 4981 cacagagaaa tgttttaact gactttggat cttcatcacc taaaaaagag tgtgttgatg 5041 gcagttccaa tgaaggacaa ctaatttata acttgttcta tattgtaaat agctgtttac 5101 aggtttttaa atttaaattc agaggttata aaatgtgtac agcattttta agtgaaaatt 5161 agtactaaca gctataggac ttgtatttaa aaaaaaaaaa aaaagcttgg acatggtttg 5221 cagctttcat acaccaagca gatgattgat aaaacctggg agtaaggtaa gaaaaatgga 5281 acaaattttt atctaaaaat tcctgtcacc acaagagggc atcagctgct cctttgcagg 5341 aaactggggt attgtacttg gcagttgtac atgaaattaa tgaaagagta tattttaaat 5401 atattgtttt taacattaaa caaatatgaa attaaagtaa attaaatttc accctattta 5461 aacatatgat aaaaaaagaa atgcacttgt aaacagaatg tttattacct cataagtgca 5521 tatatagttt gaaagagaag gcattaaaaa gaagtgcaat tcctttttag caaggataaa 5581 atcattgcct tgtgttacag attcagcctg ctgaagagta ttccactttc tgtgtactcg 5641 aattgctttc tgtttgcttt accactgcac ttgttattat tacaagggaa atagatatat 5701 acatacatat atatattctt cattacagga aatgtaacta gatattgtgc ccaagaaaaa 5761 cagccagaag caaagaaatg cttcaatctt tagttgcttc ataggcattc atgacatttt 5821 agtgctttca caacttgttg gtcgtacttt atacttgggt tatatattag acttttatag 5881 gcttgaaatc atccatcaca taagaaaata gaaatcatat taaaagtgaa ttcttctaga 5941 ggcttgtgta cactactggt tgttttagtt gggcctttta tatgaaagtt atactgtact 6001 tatctttttg ttgttgttta ggtttgttga ctaccatttc tggcttcctt tctttggttt 6061 tggattaaat ccaacagttt atttgtaagc cctgcagcag atttctttga taatttagct 6121 tttactgaat ctcttgcaat gaagaaagct atttcatcag tgatttatca ctttcaattc 6181 attgtgtgag ctggaaatat tattttatat gagagctata gcaaaataat ctgtataaac 6241 aaggaatgtg ttagcttaaa ctggatcatt ttactttttg gcatcatgca tctgtactgt 6301 accaaaagtg tttatatgtc tgcaaattaa aggtatatat tttcataaaa aaaaaaaaaa 6361 aaaaaaaaaa aaaaaaa //