LOCUS AL833177 5762 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp667B165 (from clone DKFZp667B165).
ACCESSION AL833177
VERSION AL833177.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5762)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (20-JAN-2005) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp667B165) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp667B165
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..5762
/db_xref="H-InvDB:HIT000028089"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="667 (synonym: hlno2). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp667B165"
/tissue_type="lymph node"
/note="membrane-associated nucleic acid binding protein,
differentially spliced"
/db_xref="taxon:9606"
CDS 181..1617
/codon_start=1
/gene="DKFZp667B165"
/product="hypothetical protein"
/db_xref="GOA:Q9HBD1"
/db_xref="H-InvDB:HIT000028089.17"
/db_xref="HGNC:HGNC:21461"
/db_xref="InterPro:IPR000571"
/db_xref="InterPro:IPR001841"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR017907"
/db_xref="InterPro:IPR027370"
/db_xref="InterPro:IPR032670"
/db_xref="InterPro:IPR036855"
/db_xref="InterPro:IPR041523"
/db_xref="PDB:4Z30"
/db_xref="PDB:4Z31"
/db_xref="PDB:4ZLC"
/db_xref="PDB:4ZLD"
/db_xref="UniProtKB/Swiss-Prot:Q9HBD1"
/protein_id="CAI46182.1"
/translation="MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNK
LHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCV
EDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGE
RTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKV
LVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEAL
RREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQEL
TIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFI
QNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKI
NATEVLKQQGKLFQVQTEFQMQKTVFPS"
BASE COUNT 1704 a 1160 c 1169 g 1729 t
ORIGIN
1 gtgaaacctc cgccgagctc tgccccggcg agacgaggcg cctccgtcgc caagccgcgc
61 cgtcgcgggg ctcccgggag cggcccttag cgaccccgcc cgggccccct cagcttacaa
121 aacactacac agcaaaataa tgatctgcta gactgctaac ccgagcatcc agcttccaca
181 atgcctgtgc aggcagctca atggacagaa tttctgtcct gtccaatctg ctataatgaa
241 tttgatgaga atgtgcacaa acccatcagt ttaggttgtt cacacactgt ttgcaagacc
301 tgcttgaata aacttcatcg aaaagcttgt ccttttgacc agactgccat caacacagat
361 attgatgtac ttcctgtcaa cttcgcactt ctccagttag ttggagccca ggtaccagat
421 catcagtcaa ttaagttaag taatctaggt gagaataaac actatgaggt tgcaaagaaa
481 tgcgttgagg atttggcact ctacttaaaa ccattaagtg gaggtaaagg tgtagctagc
541 ttgaaccaga gtgcactgag ccgtccaatg caaaggaaac tggtgacact tgtaaactgt
601 caactggtgg aggaagaagg tcgtgtaaga gccatgcgag cagctcgttc ccttggagaa
661 agaactgtaa cagaactgat attacagcac cagaaccctc agcagttgtc tgccaatcta
721 tgggccgctg tcagggctcg aggatgccag tttttagggc cagctatgca agaagaggcc
781 ttgaagctgg tgttactggc attagaagat ggttctgccc tctcaaggaa agttctggta
841 ctttttgttg tgcagagact agaaccaaga tttcctcagg catcaaaaac aagtattggt
901 catgttgtgc aactactgta tcgagcttct tgttttaagg ttaccaaaag agatgaagac
961 tcttccctaa tgcagctgaa ggaggaattt cggagttatg aagcattacg cagagaacat
1021 gatgcccaaa ttgttcatat tgccatggaa gcaggactcc gtatttcacc tgaacagtgg
1081 tcctctcttt tgtatggtga tttggctcat aaatcacaca tgcagtctat cattgataag
1141 ctacagtctc cagagtcatt tgcaaagagt gtccaggaat tgacaattgt tttgcaacga
1201 acaggtgacc cagctaactt aaatagactg aggcctcatt tagagcttct tgcaaacata
1261 gaccctaatc cagacgctgt ttcaccaact tgggagcagc tggaaaatgc aatggtagct
1321 gttaaaacag tagttcatgg ccttgtggac ttcatacaaa attatagtag aaaaggccat
1381 gagacccctc agcctcagcc aaacagcaaa tacaagacta gcatgtgccg agatttgcga
1441 cagcaagggg gttgtccacg aggaacaaat tgtacatttg cccattctca ggaagagctt
1501 gaaaagtatc gattaaggaa caaaaagatc aatgccactg aagtactgaa acaacaggga
1561 aaattgttcc aagtacaaac ggaatttcaa atgcagaaaa cagtgtttcc cagctaatct
1621 cacgtagtac tgacagtacc ttaagagctc tggagaccgt gaagaaagtg ggaaaggttg
1681 gcgctaatgg tcagaatgct gctgggccct ctgcagattc tgtaactgaa aataaaattg
1741 gttctccacc caagactcct gtaagtaatg tagcagctac ctcagctggg ccctctaatg
1801 ttggaacaga gctgaattct gtgcctcaaa aatccagccc atttctaact agagtaccag
1861 tatatcctcc gcattctgaa aacattcagt attttcaaga tccaaggact cagataccct
1921 ttgaagtccc acagtaccca cagacaggat actatccacc acctccaacg gtaccagctg
1981 gtgtggctcc ctgtgttcct cgctttgtga ggtccaataa cgttccagag tcctccctcc
2041 cacctgcttc catgccatat gccgatcatt acagtacatt ttcccctcga gatcgaatga
2101 attcttctcc ttaccagcct cctcctccgc agccgtatgg accagttcct ccagtacctt
2161 ctggaatgta tgctcctgtg tacgacagca ggcgcatctg gcgcccacct atgtaccaac
2221 gagatgacat tattagaagc aattctttac ctccaatgga tgtgatgcac tcatctgtct
2281 atcagacatc tttgcgggaa agatataact cattagatgg atattattcg gtggcttgtc
2341 agccaccaag tgagccaagg acaactgtgc ctttaccaag ggaaccttgt ggtcatttga
2401 agaccagttg cgaggagcag ataagaagaa agccagatca gtgggcacag taccacactc
2461 agaaagcacc tcttgtctct tcaactcttc ctgtggcaac acagtcacca acaccacctt
2521 ctcctctgtt cagtgtagac tttcgtgcgg atttctcaga gagtgtgagt ggtacaaaat
2581 ttgaagaaga tcatctttcc cattattctc cctggtcttg tggcaccata ggctcctgta
2641 taaatgccat tgattcagag cccaaagatg tcattgctaa ttcaaatgct gtgttaatgg
2701 acctggacag tggtgatgtt aagagaagag tacatttatt tgaaacccag agaaggacaa
2761 aagaagaaga tccaataatt ccctttagtg atggacccat catctcaaaa tggggtgcga
2821 tttccagatc ttcccgtaca ggttaccata ccacagatcc tgtccaggcc actgcttccc
2881 aaggaagtgc gactaagccc atcagtgtat cagattatgt cccttatgtc aatgctgttg
2941 attcaaggtg gagttcatat ggcaacgagg ccacatcatc agcacactat gttgaaaggg
3001 acagattcat tgttactgat ttatctggtc atagaaagca ttccagtact ggggaccttt
3061 tgagccttga acttcagcag gccaagagca actcattact tcttcagaga gaggccaatg
3121 ctttggccat gcaacagaag tggaattccc tggatgaagg ccgtcacctt accttaaacc
3181 ttttaagcaa ggaaattgaa ctaagaaatg gagagttaca gagtgattat acagaagatg
3241 caacagatac taaacctgat agggatatcg agttagagct ttcagcactt gatactgatg
3301 aacctgatgg acaaagtgaa ccaattgaag agatcttgga catacagctt ggtatcagtt
3361 ctcaaaatga tcagttgcta aatggaatgg cagtggaaaa tgggcatcca gtacagcagc
3421 accaaaagga gccaccaaag cagaagaaac agagtttagg tgaagaccat gtgattctgg
3481 aggagcaaaa aacaattctg ccggtaactt cttgctttag ccagccactc ccagtgtcta
3541 ttagcaatgc aagttgcctc cccatcacca catctgtcag tgctggcaac ctcattctga
3601 aaactcatgt tatgtctgaa gataaaaacg actttttaaa acctgttgca aatgggaaga
3661 tggttaacag ctgaaaggag gttcatcttt caaatttgtg accacaccat ggaagcattt
3721 acactagctt tttatatata taatatatat tatataatgt atattttttt taaaaaaaaa
3781 gatattactg ggggcatcca tttcctgtgg actctttgat acttcaagcc ctcttgcatt
3841 agcattatga aaaaaaaaaa gaaaatttac tttactaggg taacatgttc actttccaga
3901 aatgattgga atttggacaa catttaactt aagcttcaag cagcttttta tgagtttgta
3961 gcaatccggt gcagtaactg agccatttcc tattttaaat ggcttctata gaaaattaac
4021 aactcagtta ttaaactagc aggatcctac aatgatacat ctagtgaaag tagacttagt
4081 taacttattt atttctattt tatgtttcac tgagagaagt ttccatctca ttccagctgc
4141 tttatttatc tttttcatgg aactttgcat ggatttcttt ttcttttttt aattttgaag
4201 agtggagtta gatgttctta ccatagaatt ttacagggtt atatactagc attctttact
4261 gcattatatg taggagtgtg gtgcagtgct tttatctgta gcatataatt tttttttaat
4321 tttccatttt tcaagagtag tttctgcttt gttaatattt atacacaggc tacttgttga
4381 agtaattaat taaaaatata accaagtgcc taagtctttc agctgatgta ctagatatta
4441 aattctccta agttatgcag aatcgttttt acaattttga taaattatgc actaatgtaa
4501 tggcagtttt ttaaaatgca gatttaagcc tgtacattat tgaatctgat gacttggcaa
4561 aagaatcagg tgctttcagc tttcttgaga aaaccctgta tgtagcgttt gcactgacta
4621 acaagatggt attgctgggt ttttaattta aactaattaa tttggttgtt cattgcatta
4681 tcttggttaa atattgttta ttgttacttc atgttggggt ttagtttttc ttgttttttg
4741 actgttaggt tgataagact atgaactgtg taatagtaga acagtggcta acatttattc
4801 atacttaaga acatgaataa tttctgcctt gctaaaatgt gactgaaatg gttttgactt
4861 ggcatctgaa agtatacaat gtgttcaaca agtcatgcat cagatttgtg ggaggtattg
4921 tactgaaacc taaatttcag tcaacatttg aaaagaagag ctgggcattc cttcctggtg
4981 atctttacct atagtttatc tatctgtttt tcttctgttt ctttaagatt agtttgactt
5041 ttattattat ttttttaatt aacttctgtg aagttgttta ctctgaaaat tgtactggaa
5101 tattttaagc caagctgatc tttcaccagg tgtactgtat gtaagggctt ttcctgctag
5161 caagatgctt aaacaggatc atgttattgg tcgtctgagc tatttagttg ttttacaaaa
5221 ccacagcatt gtatcagata agattttgat aaaaagtttt gtgcacattt ccaggggcgg
5281 gagggttgac atttccctga aatttcttga ttagaatgag taaatactgg tgtttgatac
5341 ctgtcttaat gaacatgctc ataaggtgac tgataagttg taaatatacc tgagaaacaa
5401 aggggtagtt ttgatattct ggtgtcagta tggaagatct tacacattta tttaatactc
5461 aaatgtatga agatgtttgt ttgtagcata acaacagcac agtagccttg acttagtttc
5521 ctttggttag tactgtacct tttttgccat ggccagtgct ccccatccct atgaagacat
5581 tttatttatt tcactctgta acctgaaatg aataggaaca agggttttaa accatgttac
5641 attaacttat ttctgacatt ataaattagc ctagaatatt acaggaacat gattgttata
5701 taatttatat cagaaccttt ctataaatat gtgcttatta catttgaaaa aaaaaaaaaa
5761 aa
//