LOCUS AL833066 6144 bp mRNA linear HTC 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451J0315 (from clone DKFZp451J0315).
ACCESSION AL833066
VERSION AL833066.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6144)
AUTHORS Bloecker H., Boecher M., Brandt P., Mewes H.W., Weil B., Amid C.,
Osanger A., Fobo G., Han M., Wiemann S.
CONSRTM The German cDNA Consortium
JOURNAL Submitted (22-SEP-2004) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research
Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by GBF (National Research Centre for Biotechnology Ltd.,
Braunschweig/Germany) within the cDNA sequencing consortium of the
German
Genome Project.
This clone (DKFZp451J0315) is available at the RZPD Deutsches
Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
Please contact RZPD for ordering:
http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp451J0315
Further information about the clone and the sequencing project is
available at http://mips.gsf.de/projects/cdna/
FEATURES Location/Qualifiers
source 1..6144
/db_xref="H-InvDB:HIT000027978"
/organism="Homo sapiens"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451J0315"
/tissue_type="spinal cord"
/note="hypothetical protein, differentially spliced"
/db_xref="taxon:9606"
CDS 387..5414
/codon_start=1
/gene="DKFZp451J0315"
/product="hypothetical protein"
/db_xref="GOA:Q7Z3U7"
/db_xref="H-InvDB:HIT000027978.17"
/db_xref="HGNC:HGNC:29177"
/db_xref="InterPro:IPR015403"
/db_xref="InterPro:IPR016024"
/db_xref="InterPro:IPR026829"
/db_xref="InterPro:IPR032629"
/db_xref="InterPro:IPR032691"
/db_xref="InterPro:IPR032817"
/db_xref="UniProtKB/Swiss-Prot:Q7Z3U7"
/protein_id="CAD89933.1"
/translation="MSGTSSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGII
KVKTIAARNTEILAALKENSSEVVQPFLMGCGTKEPKITQLCLAAIQRLMSHEVVSET
AAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHDEALSKAIVLCFRLHFTKDNI
TNNTAAATVRQVVTVVFERMVAEDERHRDIIEQPVLVQGNSNRRSVSTLKPCAKDAYM
LFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFGFLLKERVC
PLVIKLFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEI
FLSLLVKFLDADKPQWLRAVAVESIHRFCVQPQLLRSFCQSYDMKQHSTKVFRDIVNA
LGSFIQSLFLVPPTGNPATSNQAGNNNLGGSVSAPANSGMVGIGGGVTLLPAFEYRGT
WIPILTITVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHCLLDLVRGITSMIEGELG
ELETECQTTTEEGSSPTQSTEQQDLQSTSDQMDKEIVSRTVWEEMVNACWCGLLAALS
LLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNT
TTAATLSNKSYSVQGQSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRT
LLNLAHCHGAVLGTSWQLVLATLQHLVWILGLKPSSGGALKPGRAVEGPSTALTTAVM
TDLPVISNILSRLFESSQYLDDVSLHHLINALCSLSLEAMDMAYGNNKEPSLFAVAKL
LETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALTSLIKAGLTFNHDPPLS
QNQRLQLLLLNPLKEMSNINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGAIR
NDQGESLIRTAFQCLQLVVTDFLPTMPCTCLQIVVDVAGSFGLHNQELNISLTSIGLL
WNISDYFFQRGETIEKELNKEEAAQQKQAKEKGVVLNRPFHPAPPFDCLWLCLYAKLG
ELCVDPRPAVRKSAGQTLFSTIGAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADK
EKIESGGGNILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGDFSRAWDVL
LDHIQSAALSKNNEVSLAALKSFQEILQIVSPVRDSDKPETPPVVNVPVPVLIGPISG
MSRPFVRTDSIGEKLGRYSSSEPPIVTDELEDLNLWWAAWNTWYRIGSESTKPPITFD
KLTFIPSQPFLTALIQIFPALYQHIKTGFNMDDLQKLGVILHSAISVPISSDASPFIL
PSYTEAVLTSLQEAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYG
QLETKHIANAKYNQIQLFAPAEWVALNYVPFAERSLEVVVDLYQKTACHKAVVNEKVL
QNIIKTLRVPLSLKYSCPSESTWKLAVSSLLRVLSIGLPVARQHASSGKFDSMWPELA
NTFEDFLFTKSIPPDNLSIQEFQRNENIDVEVVQLISNEILPYANFIPKEFVGQIMTM
LNKGSIHSQSSSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALSV
LLKRSQDVLHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENACISL
FGIPPYF"
BASE COUNT 1782 a 1240 c 1353 g 1769 t
ORIGIN
1 gggcgactcg gctaatggcg tcggcgagtc ttaggggcct ggggagctgg cgctgaagct
61 tcttgccagg ttggctggtg acacccggtg tggctgggcc ccgcggcagc ggagggacct
121 gcccgccttg tgggtttctc ggccagagtc ggcggagcct agcgggacgg tgcgactgcg
181 gggggcgcct ccgagaaaag ccagaggtgt tgcggggaag ctgctggggg acgctcgagc
241 aggctccggg ttcgcaaccc agggcccagg aagcgggctg ctgaaggacc agagacaccg
301 ggagggagct gcctgtggcc ctaaggagct gaccgtgcca gagcttgttt gtacctctcg
361 gaaattggct gggaccttgg aggatcatgt ccggcaccag cagccccgag gcggtgaaga
421 agctgctgga gaatatgcag agcgacttgc gcgccttgtc actggagtgc aagaagaaat
481 tcccacctgt caaagaggct gctgaatcag gaataataaa agttaaaaca attgctgcac
541 gaaacactga aattttggca gcactgaaag agaacagctc agaggttgta cagccttttt
601 taatgggttg tggaaccaag gaaccgaaga tcactcagct atgtttggct gctattcaga
661 gactcatgtc acatgaagtc gtgtctgaga ctgcagctgg aaatataatt aacatgcttt
721 ggcagctaat ggagaatagt cttgaagaac ttaagctact tcaaacagtt cttgttcttt
781 taacaaccaa tacagtagtt catgatgagg cactttctaa ggcaatcgtt ctttgttttc
841 gactacactt cacaaaagat aatattacaa ataatacagc tgctgctaca gtgcgacaag
901 ttgttactgt tgtttttgag aggatggttg ctgaagatga acgacacaga gatattatag
961 aacaaccagt actggtacaa ggaaatagta acagaagatc tgtcagtacc ctcaaacctt
1021 gtgctaaaga tgcatatatg cttttccagg atctttgtca gttggttaat gctgatgctc
1081 cttattggct agtgggcatg acagaaatga ctcggacgtt tggcctcgaa ttacttgagt
1141 cagtcctcaa tgattttccg caggtctttt tacaacacca agaatttggt ttcctcctca
1201 aagaaagggt atgtcctctt gtgataaagc tcttttctcc aaatataaag ttcagacaag
1261 gttccagcac ctcatcttct ccagcaccag ttgaaaaacc atattttcct atctgcatgc
1321 gtttgctgag agtagtatct gttctgatta agcagtttta cagtcttttg gtaactgaat
1381 gtgagatatt tctgtcactt ctggtgaaat ttctggatgc agataaacca cagtggctac
1441 gagctgttgc ggtggaatca atacacagat tctgtgtgca gcctcaacta ttaaggtcat
1501 tttgtcagtc ctatgatatg aaacagcatt ctaccaaggt ttttcgtgat attgtaaatg
1561 cactgggatc ttttatacag tccttgtttc ttgtcccccc tactggaaat cctgcaacaa
1621 gcaaccaagc tggaaacaat aatttaggtg gctcagtctc agcaccagct aactcaggaa
1681 tggtggggat tggtggaggt gttactttgc taccagcatt tgaatatagg ggaacctgga
1741 tacctattct gacaatcaca gttcaaggca gtgctaaagc cacctactta gaaatgttgg
1801 acaaagttga gcctccaact atacctgaag gttacgccat gtctgtggca ttccattgtt
1861 tgctagacct tgttcgtgga atcacaagta tgattgaagg agagctagga gagcttgaaa
1921 cagaatgtca aaccaccact gaagaaggtt cttcaccaac acagtcaaca gaacagcagg
1981 atttacagtc aacatcagac caaatggata aggaaattgt tagtaggact gtttgggaag
2041 aaatggtgaa tgcctgctgg tgtggtcttc ttgctgcact ctcactcctt cttgatgcca
2101 gcacagatga agctgccact gagaatattt taaaagctga actgactatg gctgctcttt
2161 gtggaagact gggccttgta acttcaagag atgcctttat aactgcaata tgcaaaggtt
2221 ccctgcctcc ccattatgct cttactgtat tgaataccac cactgcagct acactttcca
2281 acaaatcata ttccgttcag ggccaaagtg ttatgatgat aagtccatca agtgaatctc
2341 accaacaagt tgtggcagtg ggtcaacctt tagcagtcca gcctcaaggg acagtaatgc
2401 tgacttccaa aaatatccag tgtatgagga ctttacttaa cttggcgcat tgccatgggg
2461 ctgttcttgg aacatcatgg caacttgtct tggcaactct tcagcatctt gtgtggattc
2521 tgggattaaa gcctagtagt ggcggtgcct tgaaacctgg gagagctgta gaaggaccca
2581 gtacagctct aacaacagca gtgatgacag atttaccagt gatttccaat atactttcaa
2641 gattgtttga aagctcacag tatcttgatg atgtatcact gcatcattta ataaatgcac
2701 tttgctcctt gtctctagaa gcaatggata tggcctatgg aaataataag gaaccatctc
2761 tttttgctgt tgccaaattg ttagaaactg gtttagttaa tatgcaccga atagaaattc
2821 tgtggagacc tctgactggc catctacttg aggtctgcca gcatccaaac tctcgaatga
2881 gagaatgggg agcagaagct ttaacttctc ttattaaagc aggattaaca tttaaccatg
2941 atcctccact ctcacaaaac cagaggctgc agttgctttt attgaacccg ttaaaggaga
3001 tgtccaatat taatcatcca gatattcgac tcaagcagtt agaatgcgtg ttgcagattc
3061 tgcagagtca gggagacagt cttgggcctg gatggccatt agtgcttgga gtcatgggag
3121 caatcagaaa tgatcaagga gaatccttga tacgaactgc attccagtgt cttcagttgg
3181 ttgtgacaga ttttctacca acaatgcctt gtacttgcct gcaaatagtt gtagatgttg
3241 caggtagctt tggcctccat aaccaagaac tcaatattag tttaacttca ataggtttat
3301 tgtggaatat ttcagattat tttttccaaa gaggggaaac tattgaaaaa gaactaaata
3361 aggaagaggc agcacagcaa aagcaggcaa aagagaaagg agttgtttta aatcggccat
3421 tccaccctgc accgccattt gattgcttgt ggttatgtct ttatgcaaaa ttgggtgaac
3481 tatgtgtgga tccccgtcct gctgtcagga agagtgcagg gcaaactctg ttttctacaa
3541 ttggtgcgca tggaacttta ttacagcatt caacctggca cactgttatc tggaaggtac
3601 tctttcatct actggacaga gttcgagagt cctctaccac tgcagacaaa gaaaagattg
3661 agtctggagg tggcaatatt ctcattcatc attcaaggga caccgccgag aagcaatggg
3721 ctgagacgtg ggtattaaca ttggctggag tagcaaggat cttcaacact agaagatatt
3781 tgctgcagcc tttaggagat ttttcaagag cttgggatgt tcttcttgac catatacagt
3841 cagcagcact cagcaaaaac aatgaagtat ctctggctgc tctgaaaagc ttccaggaaa
3901 ttttacagat tgtgtcccct gtcagagact cagataagcc tgagacacca cctgtagtta
3961 atgtacctgt gcctgttctt atagggccca tatcaggcat gagcaggcca tttgtaagaa
4021 cagattccat tggagaaaaa ctaggaagat atagtagctc tgagccaccc attgttactg
4081 atgagcttga agatttgaat ctatggtggg ctgcgtggaa tacctggtat agaattggat
4141 ctgaaagtac taagcctcct attacttttg ataaactaac ttttattcct agccagcctt
4201 ttcttacagc tttaattcag atatttccag ctctctacca acacataaaa actggtttca
4261 atatggatga cttgcaaaag ttgggagtca tattgcacag tgctatttca gtcccaataa
4321 gttcagatgc atcccctttt attcttccat cttataccga agcagttttg acaagtttac
4381 aggaagctgt acttacagct ttagatgttc tccaaaaggc catttgtgta ggaccagaaa
4441 acatgcagat aatgtatcca gctatatttg accagttgtt ggcatttgta gaattttcct
4501 gtaaacctcc acagtatgga cagctggaaa caaagcacat tgcaaatgca aaatataatc
4561 agatccaact atttgcaccg gcggaatggg tagccttgaa ttatgtgccg tttgctgaaa
4621 ggtctttaga agtagttgtg gatttatacc aaaaaacagc gtgtcacaaa gcagtggtga
4681 atgagaaagt gctccagaat attattaaga ctcttagggt tcctctcagt ttgaagtatt
4741 cctgcccttc tgaaagcaca tggaaactag cagtatcctc tctcctcaga gttctttcta
4801 ttgggctacc tgttgcccgg cagcatgctt cttctggaaa atttgacagt atgtggccag
4861 aactagccaa tacttttgaa gattttctct ttactaaaag catacctcca gataatctct
4921 ctattcaaga gtttcaaaga aatgaaaata ttgatgtcga ggtagttcaa cttatcagca
4981 atgagatact accttatgcc aattttattc ctaaggaatt tgttggtcaa ataatgacaa
5041 tgcttaacaa gggctcaata cattctcagt catcttcatt tacagaagca gagattgata
5101 ttcgtttgag agaggaattt tctaaaatgt gttttgaaac attactccag ttttccttca
5161 gtaataaagt cacaacacct caagaaggct acatctcacg aatggcactc tcagtgcttt
5221 taaagaggtc ccaagatgta ctacatcgct atatagagga tgaaagatta agtggtaaat
5281 gccctcttcc aaggcaacaa gtaacagaaa ttatatttgt tttaaaagca gtcagtactc
5341 ttattgattc acttaagaaa actcagcctg agaatgcttg tatcagccta tttggaatac
5401 caccctactt ttaaaccttg tttttaatct cttaaagttg atggaaatac ctgggcacaa
5461 gtaattgcct tatacccaac tttagtagaa tgcatcacct gttcttcttc agaagtctgt
5521 tctgcactta aagaggcact agttcctttt aaggatttca tgcagccacc agcatccaga
5581 gttcaaaatg gagaatcttg accggctaca atatatttga aagcaggaag atagtctaaa
5641 aaatgtttgc tcctaattga gtcttctgtg agaaggacat ttcttactgc aaataattct
5701 tggcagctgt tgttggcctc ctttaaattc tacttacctg agttcagtaa ttcatattac
5761 aggcttgcac atcaacaaag gctcctgaat gaacagcagt gtaaggcttt aataaattaa
5821 actgatggga gggataatta acactacagt atacatgcta ccatatctcc agttggtgat
5881 ttaaagtgag cttatgtaca gtttgtggtg tatgtgttaa tgatgtactt tttaaaaaga
5941 aagaagagat atttcaattc agtcagattt attagtctgg tgtttttgca ccctttttca
6001 agtacaaaat cgtactagaa ttttatgcaa gatggtactg taacattcca tattatctat
6061 aaccagcctt tgttaacaaa gggaactgat atacttgtgt gtataataaa tggtacagtt
6121 ctgtaaaaaa aaaaaaaaaa aaaa
//