LOCUS AL832645 5029 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451K0818 (from clone DKFZp451K0818);
complete cds.
ACCESSION AL832645
VERSION AL832645.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5029)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp451K0818) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5029
/db_xref="H-InvDB:HIT000027557"
/organism="Homo sapiens"
/map="2q35"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451K0818"
/tissue_type="human spinal cord"
/db_xref="taxon:9606"
CDS 413..3352
/codon_start=1
/gene="DKFZp451K0818"
/product="hypothetical protein"
/note="similar to ubiquitin carboxyl-terminal hydrolase"
/db_xref="GOA:Q86T82"
/db_xref="H-InvDB:HIT000027557.19"
/db_xref="HGNC:HGNC:20063"
/db_xref="InterPro:IPR001394"
/db_xref="InterPro:IPR003903"
/db_xref="InterPro:IPR018200"
/db_xref="InterPro:IPR028889"
/db_xref="InterPro:IPR032069"
/db_xref="InterPro:IPR038093"
/db_xref="InterPro:IPR038765"
/db_xref="PDB:3U12"
/db_xref="UniProtKB/Swiss-Prot:Q86T82"
/protein_id="CAD89955.1"
/translation="MSPLKIHGPIRIRSMQTGITKWKEGSFEIVEKENKVSLVVHYNT
GGIPRIFQLSHNIKNVVLRPSGAKQSRLMLTLQDNSFLSIDKVPSKDAEEMRLFLDAV
HQNRLPAAMKPSQGSGSFGAILGSRTSQKETSRQLSYSDNQASAKRGSLETKDDIPFR
KVLGNPGRGSIKTVAGSGIARTIPSLTSTSTPLRSGLLENRTEKRKRMISTGSELNED
YPKEDGSSSNNKAMTDPSRKYLTSSREKQLSLKQSEENRTSGLLPLQSSSFYGSRAGS
KEHSSGGTNLDRTNVSSQTPSAKRSLGFLPQPVPLSVKKLRCNQDYTGWNKPRVPLSS
HQQQQLQGFSNLGNTCYMNAILQSLFSLQSFANDLLKQGIPWKKIPLNALIRRFAHLL
VKKDICNSETKKDLLKKVKNAISATAERFSGYMQNDAHEFLSQCLDQLKEDMEKLNKT
WKTEPISGEENSPDISATRAYTCPVITNLEFEVQHSIICKACGEIIPKREQFNDLSID
LPRRKKPLPPRSIQDSLDLFFRAEELEYSCEKCGGKCALVRHKFNRLPRVLILHLKRY
SFNVALSLNNKIGQQVIIPRYLTLSSHCTENTKPPFTLGWSAHMAISRPLKASQMVNS
CITSPSTPSKKFTFKSKSSLALCLDSDSEDELKRSVALSQRLCEMLGNEQQQEDLEKD
SKLCPIEPDKSELENSGFDRMSEEELLAAVLEISKRDASPSLSHEDDDKPTSSPDTGF
AEDDIQEMPENPDTMETEKPKTITELDPASFTEITKDCDENKENKTPEGSQGEVDWLQ
QYDMEREREEQELQQALAQSLQEQEAWEQKEDDDLKRATELSLQEFNNSFVDALGSDE
DSGNEDVFDMEYTEAEAEELKRNAETGNLPHSYRLISVVSHIGSTSSSGHYISDVYDI
KKQAWFTYNDLEVSKIQEAAVQSDRDRSGYIFFYMHKEIFDELLETEKNSQSLSTEVG
KTTRQAS"
regulatory 5001..5006
/regulatory_class="polyA_signal_sequence"
polyA_site 5018
BASE COUNT 1560 a 1014 c 1086 g 1369 t
ORIGIN
1 tgcgtgcgtg tttgcgtgtg gtcacagttc ccgccatcag ccgctctccc tgactagggg
61 tagctagcgg cctccctcct ttgggttctg tatccctact tccattaccc tcggctcctc
121 ccactcctcg ggggctccgt gctttccgcg ggtctgtccg ggggctccgg accctcggcg
181 cagctgagtt gatggcttcc ggagaactgg catagctgca gaatatgagt agtgtcccaa
241 gaagagtgct ttgcctttgg cacaaggatc agaataaagg cgaattgcta ttacataggg
301 tttttcggta aaagtcactg aaaattattt gccatacagt aaccagagac ctccaactag
361 gggcccccaa actgtatcct gcctgtagcc agaagcaatt tttaaagaaa atatgtctcc
421 tctgaagata catggtccta tcagaattcg aagtatgcag actgggatta caaagtggaa
481 agaaggatcc tttgaaattg tagaaaaaga gaataaagtc agcctagtag ttcactacaa
541 tactggagga attccaagga tatttcagct aagtcataac attaaaaatg tggtgcttcg
601 acccagtgga gcgaaacaaa gccgcctaat gttaactctg caagataaca gcttcttgtc
661 tattgacaaa gtaccaagta aggatgcaga ggaaatgagg ttgtttctag atgcagtcca
721 tcaaaacaga cttcctgcag ccatgaaacc gtctcagggg tctggtagtt ttggagccat
781 tctgggcagc aggacctcac agaaggaaac cagcaggcag ctttcttact cagacaatca
841 ggcttctgca aaaagaggaa gtttggaaac taaagatgat attccatttc gaaaagttct
901 tggtaatccg ggtagaggat cgattaagac tgtagcagga agtggaatag ctcggacgat
961 tccttctttg acatctactt caacacctct tagatcaggg ttgctagaaa atcgtactga
1021 aaagaggaaa agaatgatat caactggctc agaattgaat gaagattacc ctaaggaaga
1081 tggttcatca tcgaacaaca aggccatgac agatccctcc agaaagtatt tgaccagcag
1141 tagagaaaag cagctgagtt tgaaacagtc agaagagaat aggacatcag ggcttttacc
1201 tttacagtca tcatcctttt atggtagcag agctggatcc aaggaacact cttctggtgg
1261 cactaactta gacaggacta atgtttcaag ccagactccc tctgccaaaa gaagtttggg
1321 atttcttcct cagccagttc ctctttctgt taaaaaactg aggtgtaacc aggattacac
1381 tggctggaat aaaccaagag tgcccctttc ctctcaccaa cagcagcaac tgcagggctt
1441 ctccaatttg ggaaatacct gctatatgaa tgctattcta caatctctat tttcactcca
1501 gtcatttgca aatgacttgc ttaaacaagg tatcccatgg aagaaaattc cactcaatgc
1561 acttatcaga cgctttgcac acttgcttgt taaaaaagat atctgtaatt cagagaccaa
1621 aaaggattta ctcaagaagg ttaaaaatgc catttcagct acagcagaga gattctctgg
1681 ttatatgcag aatgatgctc atgaattttt aagtcagtgt ttggaccagc tgaaagaaga
1741 tatggaaaaa ttaaataaaa cttggaagac tgaacctatt tctggagaag aaaattcacc
1801 agatatttca gctaccagag catacacttg ccctgttatt actaatttgg agtttgaggt
1861 tcagcactcc atcatttgta aagcatgtgg agagattatc cccaaaagag aacagtttaa
1921 tgacctctct attgaccttc ctcgtaggaa aaaaccactc cctcctcgtt caattcaaga
1981 ttctcttgat cttttcttta gggccgaaga actggagtat tcttgtgaga agtgtggtgg
2041 gaagtgtgct cttgtcaggc acaaatttaa caggcttcct agggtcctca ttctccattt
2101 gaaacgatat agcttcaatg tggctctctc gcttaacaat aagattgggc agcaagtcat
2161 cattccaaga tacctgaccc tgtcatctca ttgcactgaa aatacaaaac caccttttac
2221 ccttggttgg agtgcacata tggcaatttc tagaccattg aaagcctctc aaatggtgaa
2281 ttcctgcatc accagccctt ctacaccttc aaagaaattc accttcaaat ccaagagctc
2341 cttggcttta tgccttgatt cagacagtga ggatgagcta aaacgttctg tggccctcag
2401 ccagagactt tgtgaaatgt taggcaacga acagcagcag gaagacctgg aaaaagattc
2461 aaaattatgc ccaatagagc ctgacaagtc tgaattggaa aactcaggat ttgacagaat
2521 gagcgaagaa gagcttctag cagctgtctt ggagataagt aagagagatg cttcaccatc
2581 tctgagtcat gaagatgatg ataagccaac tagcagccca gataccggat ttgcagaaga
2641 tgatattcaa gaaatgccag aaaatccaga cactatggaa actgagaagc ccaaaacaat
2701 cacagagctg gatcctgcca gttttactga gataactaaa gactgtgatg agaataaaga
2761 aaacaaaact ccagaaggat ctcagggaga agttgattgg ctccagcagt atgatatgga
2821 gcgtgaaagg gaagagcaag agcttcagca ggcactggct cagagccttc aagagcaaga
2881 ggcttgggaa cagaaagaag atgatgacct caaaagagct accgagttaa gtcttcaaga
2941 gtttaacaac tcctttgtgg atgcattggg ttctgatgag gactctggaa atgaggatgt
3001 ttttgatatg gagtacacag aagctgaagc tgaggaactg aaaagaaatg ctgagacagg
3061 aaatctgcct cattcgtacc ggctcatcag tgttgtcagt cacattggta gcacttcttc
3121 ttcaggtcat tacattagtg atgtatatga cattaagaag caagcgtggt ttacttacaa
3181 tgacctggag gtatcaaaaa tccaagaggc tgccgtgcag agtgatcgag atcggagtgg
3241 ctacatcttc ttttatatgc acaaggagat ctttgatgag ctgctggaaa cagaaaagaa
3301 ctctcagtca cttagcacgg aagtggggaa gactacccgt caggcctcgt gaggaacaaa
3361 ctcctgggtt ggcagcatgc actgcatatt tgttactgct gcccacctca cctttcctct
3421 gctgaaggag aatttggaat tctacttgat gcgggagcaa caaacagctc agggccaaac
3481 caaaagacaa aaattggagt aacgtagaat gctccatgct attttatgga aactttggtc
3541 tcacatccgt agctgattat cctctttttc tcctatgagt ggcacttctt ttgtcttagg
3601 aatacatgtt gtaaatatat atctgtgtat gtgtgtatac gcacacacag acacacacac
3661 acacacacgg gatgaatgga gccttaaaga gttaggatga gccaccagaa tatgcctgct
3721 caaaattaat agcacagcag tttggagaag aaatgaaggt gtcaaagagt ccattcacct
3781 gagaaatgtg tgaagacata cttatcagtt ggcttttagc ttttatgttc cttgagtagt
3841 ttcactcaag tctgtaacct tttgtgtttc cttattagta aaattcactg gaaagccagc
3901 tcttcatgtt acactaatga cagtttgttc tctttgcaag agaggggcat tactgtcacc
3961 tgacttgagg agctgttttg ttgttgttgt tgtctgcaaa tttcatgaat ttgtgatgtc
4021 tttgctgttt acatgcagtc ccaagaaatg gattgttggt gctttggaat atgttacagt
4081 cccacatttg atatttctta tatactttgt tttctctaag gagatttctt cacacagtat
4141 gttcatcata tatcatcatc attattatgg tggtaaagat agaatctttt tcttttttgt
4201 cattctgcca tggagcagca ttaccctaat ggattgcaac caaaacttta aacaagtaga
4261 aagataatat ttctccaatt gggactcccc agcaggaata cttagggata aggaagaatg
4321 ctagcatctc tgtctctcaa acatagggag gataagaaga gtgttcttct ggtaaagcta
4381 aaattctgga ccactgaagc taaaagccct attgcaagta tgaaattaag tacttgagct
4441 ataggacaaa ccttgggcat ttaaccattt actgtctggc tttgccctta aaatagggtt
4501 gcaattaaaa tgtgattggc ttaggtaatc ccaagaacta acaaataaca aaggtgcata
4561 atttatttat ctacttttta ggtgctctga gttgaggcaa agtagagcgg caacattaag
4621 tgctatgcta gtcacttagc tgacgtaacc agcttggtta agcagcttat gaaaccatat
4681 aaagaattct tttgaggatg gaattctgtc cacaaaataa ttttgtgagc ccagatatca
4741 ttaggatcac acagagttaa atatagaaaa atgaaaccat cattatattc tttcgtgttt
4801 tttcttttat tataaacaag gggattattc tttagttctc agaggtaggg acaaaaccac
4861 atcaggtttt cagaaggaaa aaacattaaa aaacccacca tcacatgaga gaatcacttg
4921 aacccaggag gcagaggttg cagtgagctg agatcgcatc attgcactgc agtctgagtg
4981 acagagtgag actccatctc attaaaaaaa acgaaaacaa aaaaaaaaa
//