LOCUS AL832578 5012 bp mRNA linear HUM 15-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp451E0516 (from clone DKFZp451E0516).
ACCESSION AL832578
VERSION AL832578.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5012)
AUTHORS Ansorge W., Krieger S., Regiert T., Rittmueller C., Schwager B.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by EMBL (European Molecular Biology Laboratories,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp451E0516) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..5012
/db_xref="H-InvDB:HIT000027490"
/organism="Homo sapiens"
/chromosome="14q23.3"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="451 (synonym: hlcc1). Vector pSport1; host
DH10B; sites NotI + SalI"
/clone="DKFZp451E0516"
/tissue_type="human spinal cord"
/db_xref="taxon:9606"
CDS 219..2144
/codon_start=1
/gene="DKFZp451E0516"
/product="hypothetical protein"
/note="similar to PALS1 protein (Mus musculus), N-terminus
truncated, differntially spliced"
/db_xref="GOA:Q8N3R9"
/db_xref="H-InvDB:HIT000027490.17"
/db_xref="HGNC:HGNC:18669"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR001478"
/db_xref="InterPro:IPR004172"
/db_xref="InterPro:IPR008144"
/db_xref="InterPro:IPR008145"
/db_xref="InterPro:IPR014775"
/db_xref="InterPro:IPR015145"
/db_xref="InterPro:IPR020590"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR031185"
/db_xref="InterPro:IPR035601"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR036034"
/db_xref="InterPro:IPR036892"
/db_xref="PDB:1Y76"
/db_xref="PDB:3UIT"
/db_xref="PDB:4UU5"
/db_xref="PDB:4UU6"
/db_xref="PDB:4WSI"
/db_xref="UniProtKB/Swiss-Prot:Q8N3R9"
/protein_id="CAD89937.1"
/translation="MAVDCPGDLGTRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQE
LDLNSSMRLKKLAQIPPKTGIDNPMFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQH
TLVDYQSQEDISLLLQLVQNKDFQNAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQ
TVLKPVHHKEGQELTALLNTPHIQALLLAHDKVAEQEMQLEPITDERVYESIGQYGGE
TVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIR
GKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRE
LGLSFQKGDILHVISQEDPNWWQAYREGDEDNHPLAGLVPGKSFQQQREAMKQTIEED
KEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDHEEILTYEEMSLYHQPANRKRPIIL
IGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAA
GKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRL
INKLDTEPQWVPSTWLR"
BASE COUNT 1590 a 868 c 1056 g 1498 t
ORIGIN
1 ggggagtttc tggattcttt atccggaatt tcaagggccg ccggagggct gtcgcttctg
61 cagtgcgtag gagcggccgg ggcgggaggc tccgcggagc cgaggcgtgg agaataagaa
121 agccttgagt tttgtgaaaa accggagaag agaaactaaa aggacagtag aaaaggcttt
181 tccagtttgc ataataggaa catcagaagc accgagagat ggctgttgac tgccctggag
241 atttgggcac caggatgatg ccaatacgtc gaagtgcaca gttggagcgt attcggcaac
301 aacaggagga catgaggcgt aggagagagg aagaagggaa aaagcaagaa cttgacctta
361 attcttccat gagacttaag aaactagccc aaattcctcc aaagaccgga atagataacc
421 ctatgtttga tacagaggaa ggaattgtct tagaaagtcc tcattatgct gtgaaaatat
481 tagaaataga agacttgttt tcttcactta aacatatcca acatactttg gtagattatc
541 agagccagga ggatatttca ctgcttttac aacttgttca aaataaggat ttccagaatg
601 catttaagat acacaatgcc atcacagtac acatgaacaa ggccagtcct ccatttcctc
661 ttatctccaa cgcacaagat cttgctcaag aggtacaaac tgttttgaag ccagttcatc
721 ataaggaagg acaagaacta actgctttgc tgaatactcc acatattcag gcacttttac
781 tggcccacga taaggttgct gagcaggaaa tgcagctaga gcccattaca gatgagagag
841 tttatgaaag tattggccag tatggaggag aaactgtaaa aatagttcgt atagaaaagg
901 ctcgtgatat tccgttgggt gctacagttc gtaatgaaat ggactctgtc atcattagcc
961 ggatagtaaa agggggtgct gcagagaaaa gtggtctgtt gcatgaagga gatgaagttc
1021 tagagattaa tggcattgaa attcggggga aagatgtcaa tgaggttttt gacttgttgt
1081 ctgatatgca tggtactttg acttttgtcc tgattcccag tcaacagatc aagccgcctc
1141 ctgccaagga aacagtaatc catgtaaaag ctcattttga ctatgacccc tcagatgacc
1201 cttatgttcc atgtcgagag ttaggtctgt cttttcaaaa aggtgatata cttcatgtga
1261 tcagtcaaga agatccaaac tggtggcagg cctacaggga aggggacgaa gataatcacc
1321 ctctagccgg gcttgttcca gggaaaagct ttcagcagca aagggaagcc atgaaacaaa
1381 ccatagaaga agataaggag ccagaaaaat caggaaaact gtggtgtgca aagaagaata
1441 aaaagaagag gaaaaaggtt ttatataatg ccaataaaaa tgatgattat gaccacgagg
1501 agatcttaac ctatgaggaa atgtcacttt atcatcagcc agcaaatagg aagagaccta
1561 tcatcttgat tggtccacag aactgtggcc agaatgaatt gcgtcagagg ctcatgaaca
1621 aagaaaagga ccgctttgca tctgcagttc ctcatacaac ccggagtagg cgagaccaag
1681 aagtagccgg tagagattac cactttgttt cgcggcaagc attcgaggca gacatagcag
1741 ctggaaagtt cattgagcat ggtgaatttg agaagaattt gtatggaact agcatagatt
1801 ctgtacggca agtgatcaac tctggcaaaa tatgtctttt aagtcttcgt acacagtcat
1861 tgaagactct ccggaattca gatttgaaac catatattat cttcattgca cccccttcac
1921 aagaaagact tcgggcatta ttggccaaag aaggcaagaa tccaaagcct gaagagttga
1981 gagaaatcat tgagaagaca agagagatgg agcagaacaa tggccactac tttgatacgg
2041 caattgtgaa ttccgatctt gataaagcct atcaggaatt gcttaggtta attaacaaac
2101 ttgatactga acctcagtgg gtaccatcca cttggctgag gtgaaagaaa catccattct
2161 gtggcatgtt ggacttgatc tggcaaaaac tgccaatagg aggactgccc gacactgcag
2221 caagattgag gataagatgg aaggcagcag tataagctgt agatctgttc ttagatctct
2281 tgaattagtg agacgacagt tcccttaggc agtttgtgca tggcatcctt tattctctat
2341 acatggcttt agcggttctt gcctcatttt gggattctaa atggaagctt tcaacagagc
2401 attccatttt gtcctgttaa aaccttttgt tttcacctaa accctttctg cttagttgta
2461 tctctgtgaa aaacttgtat acacaagcgt ccatgtctca cacaaatatt gatgtgatta
2521 ttcttaagtg ttaaatcatt aacacttaaa tgacttcatt gggaatattg agcagaggga
2581 ctgtgcttct atgcactggg caaggcagta tttgcttagg aaactaattt agtcatcaga
2641 gatactttcc taaaaaggaa aaataaaaaa caaaatggtg ccactttggg ttgaagctac
2701 tttgttaggc ttgaattcat ttatatgtct tttgattctt aaaaaaacaa aaaacattcc
2761 attagaagca ccagtttttt tgctcagact ttgtggatca gactctacac tcaacacact
2821 ctaatctact taaaggtata caaaatatgc tgatcttttt taaattatga tttcctgaat
2881 ttttttctta agtcgtctca actgatttac tcacttagct tcccttccct catcagcata
2941 gtataataga atgtatgtta catttttatg aatggcaggt gttcattata atctgtattg
3001 acttaaaaag tttcttcctc atgatgctaa tagttttttg tatacatggg aggatagcac
3061 attgacagtt tttgcatttt atgtatgagc acagtatcct atgactgtgc tacgtatata
3121 taggtaataa actggaattc tgttgatgaa tatagctgct gtactgtata ttaatattta
3181 atagatcaac aaatggtcat tgaaaacact tgtttagcat tagaataaaa ttatatatgt
3241 ccttgggaaa tattatgaca gttgacttta agatcaaaag gaagggaaga cctgaaagtc
3301 atttgaacat tttaggaaaa gaatattgga gagaaaaagg tattaaatat atagaaatag
3361 gtttttaacc taacaaggtc tgcctcttat gacgagaatg caacagcttg gtaaatcata
3421 aaagaaacat ttaagctaat aggattttcg tactgtctct atagctgtag ctttaaaatt
3481 caacgtatat aattggcatg gaaacttaat ttgcagtctt ttcaagcctt taggatagtg
3541 tgatgtgtaa caaacaacct caaatgtgaa tgccttgatt ttatttttat ggtgacttta
3601 gctacagcat ttcctatacc cagagctaaa cactggaata atactgacat catttaattt
3661 aacataagca attatgttta aggagtaatt tgtgtcatgt acatatttga ttgatttttt
3721 ttcttctaca taattttatt tgaacaaatg tagacagttt atatgtcgcc tttttctgtt
3781 caaatttgca tggcctatta agttggctgg agagtgtttt atgtggaaat attttcaaga
3841 taatgttcct taggaagaaa ataacattct tgggttgagg gaaggaatgc catacactac
3901 tgtctcttca gatctgaaat actccagttt agagccagga aatttcacag gtcacaccga
3961 tttttagcat taaaaactaa ggaatatact tagcacttac ttaatctttt cagttttcca
4021 gtttacgtct caggaatgaa gtgtagtcta tggttgacaa tggagttttg tgatcctgct
4081 tattgtaact gacaactgtt ttcaactcca agagctaaac tattggcagt tcatgttaag
4141 ttagagtgag ggtgtaggta gtgtcagtga gtggctcttg tgcctgctgt agacattagg
4201 cctgcactag ggccatgtgc tgtcaagatt caggaacatg gctttaacaa gcagatcttg
4261 tatcaaggca gaggtgatgc catgccatac ttttaggaag tctgagatga taaatatttc
4321 aaggtcagtg aagtctatca atcattctcc ccttcctcat cagcaatggt agatagaaat
4381 gtcctaaact tttctaaatc ctagtgatga ggatgtgctg atattcaaca tagtccttaa
4441 agtgaaaact gagttgttgc tgacctccac aaaagaatat ggaaaaaagc cttgctgtac
4501 acctagttgt acagccactc tggccaatcc atttcctgtc cctctgtggt tctgactgga
4561 gaccccagtg tgggggaggt cttaccattt aatatagaaa tgatatcaat aactaatgct
4621 atgtacttgg aaaatcccaa taaggaagtt ttaggttggt gcataacttt gtttctcaaa
4681 ttttcgttgt cagaacaaat ggaaggagaa tattatttag actaatccag atttgctttc
4741 tatgaaaatc taatgtctgg attatcttcc ttttctcatg gcctaagaaa taaggatcaa
4801 taaggaatga tttgaatgta attttgtgaa tgtgtggaaa atataaagca gggatttagc
4861 cttaataaag gtaaccttct gacatctgtt gttaatcccc ctttgtactc ttttcctgta
4921 tctgcactgt tattttgaga tgtcatactg tacactgtat tgtaaaaata aaaagtaaaa
4981 ttatatttca aattttaaaa gccaaaaaaa aa
//